BP915247 |
Clone id |
YMU001_000069_C06 |
Library |
YMU01 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000069_C06. |
Accession |
BP915247 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4212Contig1 |
Sequence |
GGGCAAATGCCACAAAGACCCTCACGCTTGCGCAGGTGGGGCAGTTTACCTCCTGTCTTG TCGAAGGCAAGGCTACCCTTAAACAAAAGTCAGAGTCAATCCAAAGAAAGTATACAATAA CAAAGTCTCTGCTTTCTAAGGCAGACAAGTCTTCTTTTGATCGGCTTTGTAGTCAGGTTT ATGGTTTGGAGATGGAGCAAAAGAAGTTGGAGGACGACACAGTTGTTTACAACCGTTTGC AGGAGCAGTTGAAACTTTCTCCTGCTTACCAAAAGATGTTGGAGTATGGACGGGCTCATT TTGAGTTGCAGCCTCACACGGGCCAGATAATGGAGAAACTGGATCCAGAAGACTCGGAGA TGTCTTTTGAAGAGTTTTTGGAGCAGGAGAAGAAAGATGAATTCTGGCAAAGACACAACA TGGCGAGGTTTGCTCTTTCAGCAAGTTGATTAGTGGATTGCTACAGCCTTGAAGCAAAAG CCCATGATACCAAAATACACGTTGGTTGTGAGAGGGATCAGCTTGTGTATATCCTCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4ITK8 |
Definition |
sp|A4ITK8|RF1_GEOTN Peptide chain release factor 1 OS=Geobacillus thermodenitrificans (strain NG80-2) |
Align length |
72 |
Score (bit) |
34.3 |
E-value |
0.39 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S243 |
Definition |
tr|A9S243|A9S243_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
142 |
Score (bit) |
227.0 |
E-value |
3.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915247|Adiantum capillus-veneris mRNA, clone: YMU001_000069_C06. (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S243|A9S243_PHYPA Predicted protein OS=Physcomitrella paten... 227 3e-58 tr|B8LR74|B8LR74_PICSI Putative uncharacterized protein OS=Picea... 191 2e-47 tr|A7P6Q7|A7P6Q7_VITVI Chromosome chr9 scaffold_7, whole genome ... 162 1e-38 tr|A6M8U7|A6M8U7_BRAOL CA-responsive protein OS=Brassica olerace... 161 2e-38 tr|Q9FZ66|Q9FZ66_ARATH F11A6.1 protein OS=Arabidopsis thaliana G... 155 1e-36 tr|A2Q446|A2Q446_MEDTR Putative uncharacterized protein OS=Medic... 137 4e-31 tr|Q5QMM8|Q5QMM8_ORYSJ cDNA clone:J033116D22, full insert sequen... 96 9e-19 tr|A2WLP7|A2WLP7_ORYSI Putative uncharacterized protein OS=Oryza... 95 2e-18 tr|Q9LNN9|Q9LNN9_ARATH F1L3.36 OS=Arabidopsis thaliana PE=4 SV=1 82 2e-14 tr|B1SNS4|B1SNS4_9BACI Peptide chain release factor 1 OS=Geobaci... 39 0.17 tr|A5BA60|A5BA60_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17 tr|Q23QC3|Q23QC3_TETTH Viral A-type inclusion protein repeat con... 38 0.38 tr|B2VYH4|B2VYH4_PYRTR Involucrin repeat protein OS=Pyrenophora ... 38 0.38 tr|A7PDF0|A7PDF0_VITVI Chromosome chr17 scaffold_12, whole genom... 37 0.50 tr|Q7MHM3|Q7MHM3_VIBVY 2-polyprenyl-6-methoxyphenol hydroxylase ... 36 1.1 tr|Q23H78|Q23H78_TETTH Putative uncharacterized protein OS=Tetra... 36 1.1 tr|B7GMH3|B7GMH3_9BACI Protein chain release factor A OS=Anoxyba... 36 1.4 tr|Q8I954|Q8I954_ANOGA SMC1 protein OS=Anopheles gambiae GN=smc1... 36 1.4 tr|Q7QD42|Q7QD42_ANOGA AGAP002947-PA OS=Anopheles gambiae GN=AGA... 36 1.4 tr|Q8DC89|Q8DC89_VIBVU 2-polyprenyl-6-methoxyphenol hydroxylase ... 35 1.9 tr|A9W1S7|A9W1S7_METEP Putative uncharacterized protein OS=Methy... 35 1.9 tr|B7KQ91|B7KQ91_METCH Putative uncharacterized protein OS=Methy... 35 1.9 tr|Q38CF6|Q38CF6_9TRYP Putative uncharacterized protein OS=Trypa... 35 1.9 tr|Q228X0|Q228X0_TETTH Putative uncharacterized protein OS=Tetra... 35 1.9 tr|B4JPT4|B4JPT4_DROGR GH13341 OS=Drosophila grimshawi GN=GH1334... 35 1.9 tr|Q87LM4|Q87LM4_VIBPA UbiH protein OS=Vibrio parahaemolyticus G... 35 2.5 tr|A7UY12|A7UY12_BACUN Putative uncharacterized protein OS=Bacte... 35 2.5 tr|A6B9E5|A6B9E5_VIBPA 2-polyprenyl-6-methoxyphenol 4-hydroxylas... 35 2.5 tr|Q4XLW7|Q4XLW7_PLACH Putative uncharacterized protein (Fragmen... 35 2.5 tr|Q4N411|Q4N411_THEPA Putative uncharacterized protein OS=Theil... 35 2.5
>tr|A9S243|A9S243_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162389 PE=4 SV=1 Length = 770
Score = 227 bits (579), Expect = 3e-58 Identities = 109/142 (76%), Positives = 128/142 (90%) Frame = +3
Query: 3 ANATKTLTLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVY 182 +NA KTLTLAQVG+FT+CLVE K+ L+QKS++IQR++TI KSLLSKADKSSFDRLC Q+Y Sbjct: 598 SNAAKTLTLAQVGRFTTCLVETKSALQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIY 657
Query: 183 GLEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEM 362 GLE EQKKLE+DTVVYNRLQEQLKLSPAY KMLEYGRAHFELQP+TGQ++EK + +D E+ Sbjct: 658 GLENEQKKLEEDTVVYNRLQEQLKLSPAYLKMLEYGRAHFELQPNTGQLIEKFNADDEEL 717
Query: 363 SFEEFLEQEKKDEFWQRHNMAR 428 SFEE L QEKKD FWQ+H+ AR Sbjct: 718 SFEELLAQEKKDSFWQKHSPAR 739
>tr|B8LR74|B8LR74_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 420
Score = 191 bits (486), Expect = 2e-47 Identities = 94/134 (70%), Positives = 111/134 (82%) Frame = +3
Query: 3 ANATKTLTLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVY 182 +N LTLAQVG+FT+CLVE KA L QKSE+IQRK+TI KSLL KADKSSFDRLC Q+Y Sbjct: 277 SNTAGPLTLAQVGRFTNCLVEAKAALLQKSETIQRKFTIAKSLLVKADKSSFDRLCGQIY 336
Query: 183 GLEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEM 362 LE EQK+LE+DT VYNRLQEQLK+SP+YQKMLEYG HF+ +TGQ++EK + ED+E+ Sbjct: 337 RLETEQKRLEEDTKVYNRLQEQLKISPSYQKMLEYGHGHFQSHLNTGQLLEKSEAEDAEI 396
Query: 363 SFEEFLEQEKKDEF 404 SFEE L QEKKD F Sbjct: 397 SFEELLAQEKKDSF 410
>tr|A7P6Q7|A7P6Q7_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034165001 PE=4 SV=1 Length = 301
Score = 162 bits (410), Expect = 1e-38 Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 3/144 (2%) Frame = +3
Query: 6 NATKTLTLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVYG 185 + +K LTLAQVGQF +CL+E + L+ KSE IQRK+TITK+LL KAD+SSFDRL Q+Y Sbjct: 155 HGSKGLTLAQVGQFANCLIEARNELQHKSEVIQRKFTITKALLFKADRSSFDRLRQQIYK 214
Query: 186 LEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPED---S 356 LEMEQK+LE+D VYN LQ+QLKLSPAY+KMLE A EL+ +G++ E D D S Sbjct: 215 LEMEQKRLEEDAFVYNWLQQQLKLSPAYKKMLEIS-ACMELKAKSGELTEGTDSTDTEFS 273
Query: 357 EMSFEEFLEQEKKDEFWQRHNMAR 428 ++SFEE L QEKKD FWQ++ R Sbjct: 274 DISFEELLAQEKKDSFWQKNGKPR 297
>tr|A6M8U7|A6M8U7_BRAOL CA-responsive protein OS=Brassica oleracea PE=2 SV=1 Length = 328
Score = 161 bits (408), Expect = 2e-38 Identities = 82/141 (58%), Positives = 107/141 (75%) Frame = +3
Query: 6 NATKTLTLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVYG 185 N+ K LTLAQVG+F +CL+E K L+ KSE I+RKY+ITK+LL KAD+SSFDRL Q+Y Sbjct: 184 NSAKGLTLAQVGEFANCLIEAKNELQNKSEVIKRKYSITKALLFKADRSSFDRLRQQIYK 243
Query: 186 LEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMS 365 LEMEQK++++D +VYN LQ+QLKLSPAY+K+LE A EL+ T ++ D E S++S Sbjct: 244 LEMEQKRVQEDALVYNWLQQQLKLSPAYKKVLEIS-ASMELKDKTSTELDSQDDEVSDIS 302
Query: 366 FEEFLEQEKKDEFWQRHNMAR 428 FEE LEQEKKD FW ++ R Sbjct: 303 FEELLEQEKKDSFWHKNGRLR 323
>tr|Q9FZ66|Q9FZ66_ARATH F11A6.1 protein OS=Arabidopsis thaliana GN=At1g17665 PE=4 SV=1 Length = 338
Score = 155 bits (393), Expect = 1e-36 Identities = 80/134 (59%), Positives = 103/134 (76%) Frame = +3
Query: 6 NATKTLTLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVYG 185 N K LTLAQVG+F +CL+E K L+ KSE I+RK++ITK+LL KAD+SSFDRL Q+Y Sbjct: 195 NNAKGLTLAQVGEFANCLIEAKNELQHKSEVIKRKFSITKALLFKADRSSFDRLRQQIYK 254
Query: 186 LEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMS 365 LEMEQK++E+D +VYN LQ+QLKLSPAY+K+LE A EL+ + ++ D E S++S Sbjct: 255 LEMEQKRVEEDALVYNWLQQQLKLSPAYKKVLEIS-ASMELKDKSSTELDNPDDEFSDIS 313
Query: 366 FEEFLEQEKKDEFW 407 FEE LEQEKKD FW Sbjct: 314 FEELLEQEKKDSFW 327
>tr|A2Q446|A2Q446_MEDTR Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC155896g48v2 PE=4 SV=1 Length = 145
Score = 137 bits (345), Expect = 4e-31 Identities = 73/139 (52%), Positives = 99/139 (71%) Frame = +3
Query: 24 TLAQVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADKSSFDRLCSQVYGLEMEQK 203 +L QV +F + L++ + L+ K++ IQRK+ ITK+LL KAD+SSFDRL Q+Y LE+EQK Sbjct: 9 SLTQVVRFANSLIDARNELQHKADVIQRKFVITKALLCKADRSSFDRLHQQIYKLELEQK 68
Query: 204 KLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMSFEEFLE 383 +LE+D VYN LQ QLKLSPAY+KMLE G A E Q+ + +D E +++SFEE L Sbjct: 69 RLEEDAFVYNSLQYQLKLSPAYKKMLELG-ACTEKAKQCEQV-DNIDDEFADISFEELLA 126
Query: 384 QEKKDEFWQRHNMARFALS 440 QEKKD FWQ++ +R S Sbjct: 127 QEKKDSFWQKNGKSRVCSS 145
>tr|Q5QMM8|Q5QMM8_ORYSJ cDNA clone:J033116D22, full insert sequence OS=Oryza sativa subsp. japonica GN=P0419B01.15 PE=2 SV=1 Length = 241
Score = 96.3 bits (238), Expect = 9e-19 Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 10/138 (7%) Frame = +3
Query: 33 QVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADK---SSFDRLCSQVYGLEMEQK 203 +V +F +CLV+ + L KSE +QR I K+LLS +S+DRLC QV+ LE E K Sbjct: 106 KVHEFINCLVDARNELLHKSEMVQRSCRIKKALLSNPCSRRANSYDRLCEQVHKLEAEHK 165
Query: 204 KLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPED------SEMS 365 +L+ D +YN +QEQL++S +Y+ ++E ++EK + ED +EM+ Sbjct: 166 RLKKDADIYNYIQEQLQMSESYKLLIE-----------LSALVEKAEREDALATEAAEMT 214
Query: 366 FEEFLEQEKKD-EFWQRH 416 FEE L QEK D FWQRH Sbjct: 215 FEELLAQEKSDAAFWQRH 232
>tr|A2WLP7|A2WLP7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00768 PE=4 SV=1 Length = 241
Score = 95.1 bits (235), Expect = 2e-18 Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 4/132 (3%) Frame = +3
Query: 33 QVGQFTSCLVEGKATLKQKSESIQRKYTITKSLLSKADK---SSFDRLCSQVYGLEMEQK 203 +V +F +CLV+ + L KSE +QR I K+LLS +S+DRLC QV+ LE E K Sbjct: 106 KVHEFINCLVDARNELLHKSEMVQRSCRIKKALLSNPCSRRANSYDRLCEQVHKLEAEHK 165
Query: 204 KLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMSFEEFLE 383 +L+ D +YN +QEQL++S +Y+ ++E + + L E +EM+FEE L Sbjct: 166 RLKKDADIYNYIQEQLQMSESYKLLIE-----LSALVEKAKREDALATEAAEMTFEELLA 220
Query: 384 QEKKD-EFWQRH 416 QEK D FWQRH Sbjct: 221 QEKSDAAFWQRH 232
>tr|Q9LNN9|Q9LNN9_ARATH F1L3.36 OS=Arabidopsis thaliana PE=4 SV=1 Length = 82
Score = 81.6 bits (200), Expect = 2e-14 Identities = 41/72 (56%), Positives = 54/72 (75%) Frame = +3
Query: 192 MEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMSFE 371 MEQK++E+D +VYN LQ+QLKLSPAY+K+LE A EL+ + ++ D E S++SFE Sbjct: 1 MEQKRVEEDALVYNWLQQQLKLSPAYKKVLEIS-ASMELKDKSSTELDNPDDEFSDISFE 59
Query: 372 EFLEQEKKDEFW 407 E LEQEKKD FW Sbjct: 60 ELLEQEKKDSFW 71
>tr|B1SNS4|B1SNS4_9BACI Peptide chain release factor 1 OS=Geobacillus sp. WCH70 GN=GWCH70DRAFT_0565 PE=4 SV=1 Length = 358
Score = 38.9 bits (89), Expect = 0.17 Identities = 25/72 (34%), Positives = 35/72 (48%) Frame = +3
Query: 186 LEMEQKKLEDDTVVYNRLQEQLKLSPAYQKMLEYGRAHFELQPHTGQIMEKLDPEDSEMS 365 L M+ + + D + + +EQ LS Q EY +L + EKLDPE EM Sbjct: 18 LLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDEAKAMLEEKLDPEMREMV 77
Query: 366 FEEFLEQEKKDE 401 EE E E+K+E Sbjct: 78 KEEIDELEQKEE 89
|