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NBDC - LSDB Archive
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BP915151
Clone id YMU001_000067_B03
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000067_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGGAAGAAGAGCTTACATGAAGCAACCCGAGGGTTTTGTTATTCCTGGCAAGGAACACA
TGGTATGTATGCTCAATAGAAGCTTGTATGGGCTGAAACAATCATGTAGACAGTGGTACA
AGAAGTTTGATTGCTTCATGCTTAAACATGGTTACAAAAGAAGCCATGCAGACCATTGTT
TGTATACCAAACGTGATGAGGATGGAAGCCCTATCATTCTTGTGCTCTATGTTGATGATA
TGTTGATAGTTGCAAAGAAAAGAAGCACTGTTGATGCTCTTAAAGGGCAGCTGAAATCTG
CATTTTCAATGAAAGACCTTGGGGCAGCTGAACATATACTTGGAGTGCGTGTTACAAGGC
AAAGAGACAAGCGCCTATTGTATTTGTCGCAAGAAAAGTACATTGAAAAGGTGCTGGACA
GATTTAACATGGCTGAAGCAAAGCCTCTTGGTGTGCCATTACAGCCATATGTCAAGATCT
CCAAGGATGATTGTCCCAAGTCAAAGGAAGAAGCCAATGACATGCAAAGTGTGCCTTAGG
CTTCAGCTTGTGGTTCACTTATGTATGCTATGGTTGCTACTAGGCTTGACATAGCCCATG
CAGTGGG
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 197
Score (bit) 235.0
E-value 1.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915151|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B03.
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra...   235   1e-61
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G...   112   1e-24
sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W O...    87   9e-17
sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg0...    74   8e-13
sp|O13527|YA11B_YEAST Transposon Ty1-A Gag-Pol polyprotein OS=Sa...    62   2e-09
sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein OS=Sa...    62   3e-09
sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein OS=Sa...    61   4e-09
sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein OS=...    61   5e-09
sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein OS=...    61   5e-09
sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein OS=...    59   1e-08
sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein OS=S...    59   1e-08
sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein OS=S...    59   1e-08
sp|Q99337|YN12B_YEAST Transposon Ty1-NL2 Gag-Pol polyprotein OS=...    59   1e-08
sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein OS=...    59   1e-08
sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein OS=...    59   1e-08
sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein OS=...    59   1e-08
sp|O13535|YH11B_YEAST Transposon Ty1-H Gag-Pol polyprotein OS=Sa...    59   1e-08
sp|Q12269|YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polyprotein OS=...    59   1e-08
sp|Q03612|YE11B_YEAST Transposon Ty1-ER1 Gag-Pol polyprotein OS=...    59   1e-08
sp|P0C2I2|YD14B_YEAST Transposon Ty1-DR5 Gag-Pol polyprotein OS=...    59   1e-08
sp|P0C2I7|YL14B_YEAST Transposon Ty1-LR4 Gag-Pol polyprotein OS=...    58   3e-08
sp|P0C2I3|YD15B_YEAST Transposon Ty1-DR6 Gag-Pol polyprotein OS=...    58   3e-08
sp|Q07793|YD13B_YEAST Transposon Ty1-DR4 Gag-Pol polyprotein OS=...    58   3e-08
sp|Q07163|TY1AB_YEAST Transposon TyH3 Gag-Pol polyprotein OS=Sac...    58   3e-08
sp|Q92393|YO12B_YEAST Transposon Ty1-OR Gag-Pol polyprotein OS=S...    58   4e-08
sp|Q12316|YG13B_YEAST Transposon Ty1-GR3 Gag-Pol polyprotein OS=...    58   4e-08
sp|Q12193|YB12B_YEAST Transposon Ty1-BR Gag-Pol polyprotein OS=S...    58   4e-08
sp|Q12491|YB21B_YEAST Transposon Ty2-B Gag-Pol polyprotein OS=Sa...    57   7e-08
sp|P0C2J1|YP14B_YEAST Transposon Ty1-PR3 Gag-Pol polyprotein OS=...    57   1e-07
sp|P0C2I9|YP12B_YEAST Transposon Ty1-PR1 Gag-Pol polyprotein OS=...    57   1e-07

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
            transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
          Length = 1328

 Score =  235 bits (600), Expect = 1e-61
 Identities = 115/197 (58%), Positives = 146/197 (74%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM+QPEGF + GK+HMVC LN+SLYGLKQ+ RQWY KFD FM    Y ++++D C+Y KR
Sbjct: 937  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 996

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              + + IIL+LYVDDMLIV K +  +  LKG L  +F MKDLG A+ ILG+++ R+R  R
Sbjct: 997  FSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSR 1056

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             L+LSQEKYIE+VL+RFNM  AKP+  PL  ++K+SK  CP + EE  +M  VP +SA G
Sbjct: 1057 KLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVG 1116

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV TR DIAHAV
Sbjct: 1117 SLMYAMVCTRPDIAHAV 1133


>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP
            PE=1 SV=3
          Length = 1409

 Score =  112 bits (281), Expect = 1e-24
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLY-TK 191
            YM+ P+G  I      VC LN+++YGLKQ+ R W++ F+  + +  +  S  D C+Y   
Sbjct: 1017 YMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILD 1074

Query: 192  RDEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDK 371
            +      I ++LYVDD++I     + ++  K  L   F M DL   +H +G+R+  Q DK
Sbjct: 1075 KGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK 1134

Query: 372  RLLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASAC 551
              +YLSQ  Y++K+L +FNM     +  PL   +     +   S E+ N     P  S  
Sbjct: 1135 --IYLSQSAYVKKILSKFNMENCNAVSTPLPSKINY---ELLNSDEDCN----TPCRSLI 1185

Query: 552  GSLMYAMVATRLDIAHAV 605
            G LMY M+ TR D+  AV
Sbjct: 1186 GCLMYIMLCTRPDLTTAV 1203


>sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W
           OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2
          Length = 308

 Score = 86.7 bits (213), Expect = 9e-17
 Identities = 61/197 (30%), Positives = 90/197 (45%)
 Frame = +3

Query: 15  YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
           Y+KQP GFV       V  L   +YGLKQ+   W +  +  + K G+ R   +H LY + 
Sbjct: 17  YVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRS 76

Query: 195 DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
             DG PI + +YVDD+L+ A      D +K +L   +SMKDLG  +  LG+ +  Q    
Sbjct: 77  TSDG-PIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNI-HQSSNG 134

Query: 375 LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
            + LS + YI K      +   K    PL     + +   P  K+        P  S  G
Sbjct: 135 DITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD------ITPYQSIVG 188

Query: 555 SLMYAMVATRLDIAHAV 605
            L++     R DI++ V
Sbjct: 189 QLLFCANTGRPDISYPV 205


>sp|P92519|M810_ARATH Uncharacterized mitochondrial protein
           AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1
          Length = 240

 Score = 73.6 bits (179), Expect = 8e-13
 Identities = 45/129 (34%), Positives = 72/129 (55%)
 Frame = +3

Query: 219 LVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKRLLYLSQEK 398
           L+LYVDD+L+     + ++ L  QL S FSMKDLG   + LG+++        L+LSQ K
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60

Query: 399 YIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACGSLMYAMVA 578
           Y E++L+   M + KP+  PL   +K++         + +D +S+      G+L Y +  
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQY-LTL 112

Query: 579 TRLDIAHAV 605
           TR DI++AV
Sbjct: 113 TRPDISYAV 121


>sp|O13527|YA11B_YEAST Transposon Ty1-A Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-A PE=1 SV=2
          Length = 1755

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
 Frame = +3

Query: 48   GKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKH-GYKRSHADHCLYTKRDEDGSPIILV 224
            G    +  L +SLYGLKQS   WY+    +++K  G +      C++       S + + 
Sbjct: 1369 GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTIC 1423

Query: 225  LYVDDMLIVAKKRSTVDALKGQLKSAFSMK--DLGAAEH-----ILGVRVTRQRDKRLLY 383
            L+VDDM++ +K  +    +   LK  +  K  +LG +++     ILG+ +  QR K  + 
Sbjct: 1424 LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGK-YMK 1482

Query: 384  LSQEKYIEKVLDRFNM---AEAKPLGVPLQPYVKISKD----DCPKSKEEANDMQSV 533
            L  EK + + L + N+    + K L  P QP + I +D    D  + KE+ ++MQ +
Sbjct: 1483 LGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGLYIDQDELEIDEDEYKEKVHEMQKL 1539


>sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY4B-J PE=2 SV=2
          Length = 1803

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCM--LNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYT 188
            Y K  E   IP      C+  LN++LYGLKQS ++W      ++   G K +     LY 
Sbjct: 1391 YAKLEEEIYIPHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQ 1450

Query: 189  KRDEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAA------EHILGVR 350
              D++   +++ +YVDD +I A     +D    +LKS F +K  G          ILG+ 
Sbjct: 1451 TEDKN---LMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMD 1507

Query: 351  VTRQRDKRLLYLSQEKYIEKVLDRFN--MAEAKPLGVPLQPYVKIS-KDDCPKSKEEAND 521
            +   +    + L+ + +I ++  ++N  + + +   +P     KI  K D  +  EE   
Sbjct: 1508 LVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFR 1567

Query: 522  MQSVP*ASACGSLMYAMVATRLDIAHAV 605
               +      G L Y     R DI  AV
Sbjct: 1568 QGVLKLQQLLGELNYVRHKCRYDIEFAV 1595


>sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY4B-H PE=2 SV=1
          Length = 1802

 Score = 61.2 bits (147), Expect = 4e-09
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCM--LNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYT 188
            Y K  E   IP      C+  LN++LYGLKQS ++W      ++   G K +     LY 
Sbjct: 1390 YAKLEEEIYIPHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQ 1449

Query: 189  KRDEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAA------EHILGVR 350
              D++   +++ +YVDD +I A     +D    +LKS F +K  G          ILG+ 
Sbjct: 1450 TEDKN---LMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMD 1506

Query: 351  VTRQRDKRLLYLSQEKYIEKVLDRFN--MAEAKPLGVPLQPYVKIS-KDDCPKSKEEAND 521
            +   +    + L+ + +I ++  ++N  + + +   +P     KI  K D  +  EE   
Sbjct: 1507 LVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFR 1566

Query: 522  MQSVP*ASACGSLMYAMVATRLDIAHAV 605
               +      G L Y     R DI  AV
Sbjct: 1567 QGVLKLQQLLGELNYVRHKCRYDINFAV 1594


>sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-DR3 PE=1 SV=2
          Length = 1755

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
 Frame = +3

Query: 48   GKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKH-GYKRSHADHCLYTKRDEDGSPIILV 224
            G    +  L +SLYGLKQS   WY+    +++K  G +      C++       S + + 
Sbjct: 1369 GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTIC 1423

Query: 225  LYVDDMLIVAKKRSTVDALKGQLKSAFSMK--DLGAAEH-----ILGVRVTRQRDKRLLY 383
            L+VDDM++ +K  +    +   LK  +  K  +LG +++     ILG+ +  QR K  + 
Sbjct: 1424 LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGK-YMK 1482

Query: 384  LSQEKYIEKVLDRFNM---AEAKPLGVPLQPYVKISKD----DCPKSKEEANDMQSV 533
            L  EK + + L + N+    + K L  P QP   I +D    D  + KE+ ++MQ +
Sbjct: 1483 LGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKL 1539


>sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-DR1 PE=1 SV=2
          Length = 1755

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
 Frame = +3

Query: 48   GKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKH-GYKRSHADHCLYTKRDEDGSPIILV 224
            G    +  L +SLYGLKQS   WY+    +++K  G +      C++       S + + 
Sbjct: 1369 GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTIC 1423

Query: 225  LYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAE-------HILGVRVTRQRDKRLLY 383
            L+VDDM++ +K  +    +   LK  +  K +   E        ILG+ +  QR K  + 
Sbjct: 1424 LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGEGDNEIQYDILGLEIKYQRSK-YMK 1482

Query: 384  LSQEKYIEKVLDRFNM---AEAKPLGVPLQPYVKISKD----DCPKSKEEANDMQSV 533
            L  EK + + L + N+    + K L  P QP   I +D    D  + KE+ ++MQ +
Sbjct: 1483 LGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKL 1539


>sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY1B-PR2 PE=1 SV=1
          Length = 1756

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
 Frame = +3

Query: 48   GKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKH-GYKRSHADHCLYTKRDEDGSPIILV 224
            G    +  L +SLYGLKQS   WY+    +++K  G +      C++       S + + 
Sbjct: 1370 GMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTIC 1424

Query: 225  LYVDDMLIVAKKRSTVDALKGQLKSAFSMK--DLGAAEH-----ILGVRVTRQRDKRLLY 383
            L+VDDM++ +K  +    +   LK  +  K  +LG +++     ILG+ +  QR K  + 
Sbjct: 1425 LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGK-YMK 1483

Query: 384  LSQEKYIEKVLDRFNM---AEAKPLGVPLQPYVKISKD----DCPKSKEEANDMQSV 533
            L  E  + + + + N+    + + L  P QP + I +D    D  + KE+ ++MQ +
Sbjct: 1484 LGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKL 1540
tr_hit_id Q5MG99
Definition tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea batatas
Align length 197
Score (bit) 236.0
E-value 6.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915151|Adiantum capillus-veneris mRNA, clone:
YMU001_000067_B03.
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea b...   236   6e-61
tr|Q0DX39|Q0DX39_ORYSJ Os02g0776400 protein OS=Oryza sativa subs...   234   2e-60
tr|Q75HA9|Q75HA9_ORYSJ Putative polyprotein (Retrotransposon pro...   232   1e-59
tr|Q2QSQ2|Q2QSQ2_ORYSJ Retrotransposon protein, putative, Ty1-co...   229   9e-59
tr|Q0J4E9|Q0J4E9_ORYSJ Os08g0518300 protein OS=Oryza sativa subs...   228   3e-58
tr|Q53ND1|Q53ND1_ORYSJ Os11g0157000 protein OS=Oryza sativa subs...   227   4e-58
tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis...   226   8e-58
tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis...   226   8e-58
tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis...   226   8e-58
tr|Q6L4X8|Q6L4X8_ORYSJ Putative polyprotein OS=Oryza sativa subs...   226   1e-57
tr|Q6L4V3|Q6L4V3_ORYSJ Putative polyprotein OS=Oryza sativa subs...   226   1e-57
tr|Q7XV90|Q7XV90_ORYSJ OSJNBb0012E08.6 protein OS=Oryza sativa s...   225   2e-57
tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis...   224   2e-57
tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis...   224   3e-57
tr|A5B0C8|A5B0C8_VITVI Putative uncharacterized protein OS=Vitis...   224   3e-57
tr|A5BJQ3|A5BJQ3_VITVI Putative uncharacterized protein OS=Vitis...   224   4e-57
tr|Q7XP09|Q7XP09_ORYSJ OSJNBb0013J13.11 protein OS=Oryza sativa ...   223   5e-57
tr|A5B1S3|A5B1S3_VITVI Putative uncharacterized protein OS=Vitis...   223   5e-57
tr|Q7G739|Q7G739_ORYSJ Putative pol polyprotein (Retrotransposon...   223   7e-57
tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis...   223   7e-57
tr|Q75IK3|Q75IK3_ORYSJ Putative polyprotein OS=Oryza sativa subs...   223   9e-57
tr|A5BYJ3|A5BYJ3_VITVI Putative uncharacterized protein OS=Vitis...   223   9e-57
tr|A5BC72|A5BC72_VITVI Putative uncharacterized protein OS=Vitis...   223   9e-57
tr|A5C9A6|A5C9A6_VITVI Putative uncharacterized protein OS=Vitis...   222   1e-56
tr|A5BHI5|A5BHI5_VITVI Putative uncharacterized protein OS=Vitis...   222   1e-56
tr|A5BPU0|A5BPU0_VITVI Putative uncharacterized protein OS=Vitis...   221   3e-56
tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis...   220   4e-56
tr|Q6AUC7|Q6AUC7_ORYSJ Putative polyprotein OS=Oryza sativa subs...   219   7e-56
tr|Q2QP36|Q2QP36_ORYSJ Retrotransposon protein, putative, Ty1-co...   219   7e-56
tr|B1N668|B1N668_SOLLC Copia LTR rider OS=Solanum lycopersicum G...   219   1e-55

>tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea
            batatas PE=4 SV=1
          Length = 1415

 Score =  236 bits (603), Expect = 6e-61
 Identities = 114/197 (57%), Positives = 145/197 (73%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM+QPEGF + GKE  VC L +SLYGLKQ+ RQWYKKF   M KHGYK++ +DHC++  R
Sbjct: 935  YMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNR 994

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              D   +IL+LYVDDMLIV +  S +  LK +L  +FSMKD+G A+ ILG+++ R R  +
Sbjct: 995  YSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNK 1054

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             L+LSQEKYIEKVL+RF+M EAKP+  PL  + K+ K  CP S++E  +MQ VP +SA G
Sbjct: 1055 KLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVG 1114

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV TR DIAHAV
Sbjct: 1115 SLMYAMVCTRPDIAHAV 1131


>tr|Q0DX39|Q0DX39_ORYSJ Os02g0776400 protein OS=Oryza sativa subsp.
            japonica GN=Os02g0776400 PE=4 SV=1
          Length = 1315

 Score =  234 bits (598), Expect = 2e-60
 Identities = 115/197 (58%), Positives = 144/197 (73%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++PGKE  VC L RSLYGLKQS RQWYK+FD FML HG+KRS  D C+Y K 
Sbjct: 1017 YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 1076

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              +GSPI L+LY+DDMLI AK +  +  LK QL S F MKDLGAA+ ILG+ +TR R+  
Sbjct: 1077 -VNGSPIYLLLYIDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSG 1135

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
            LL+LSQ+ YI+KVL RFNM +AKP+  P+ P+ K+S   C  + E+   M  VP +SA G
Sbjct: 1136 LLFLSQQSYIKKVLQRFNMHDAKPVSTPITPHFKLSALQCASTDEDVEYMSRVPYSSAVG 1195

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +R D++HA+
Sbjct: 1196 SLMYAMVCSRPDLSHAM 1212


>tr|Q75HA9|Q75HA9_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty1-copia subclass) (Integrase core domain
            containing protein) OS=Oryza sativa subsp. japonica
            GN=OSJNBa0056E06.5 PE=4 SV=1
          Length = 1322

 Score =  232 bits (591), Expect = 1e-59
 Identities = 115/197 (58%), Positives = 143/197 (72%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++PGKE  VC L RSLYGLKQS RQWYK+FD FML HG+KRS  D C+Y K 
Sbjct: 933  YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 992

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              +GSPI L+LYVDDMLI AK +  +  LK QL S F MKDLGAA+ ILG+ +TR R+  
Sbjct: 993  -VNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSG 1051

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
            LL+LSQ+ YI+KVL RFNM +AKP+  P+ P+ K+S   C  + E+   M  VP +SA G
Sbjct: 1052 LLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVG 1111

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +  D++HA+
Sbjct: 1112 SLMYAMVCSWPDLSHAM 1128


>tr|Q2QSQ2|Q2QSQ2_ORYSJ Retrotransposon protein, putative, Ty1-copia
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g23320 PE=4 SV=1
          Length = 1278

 Score =  229 bits (584), Expect = 9e-59
 Identities = 113/197 (57%), Positives = 143/197 (72%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++PGKE  VC L RSLYGLKQS RQWYK+FD FML HG+KRS  D C+Y K 
Sbjct: 933  YMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF 992

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              +GSPI L+LYVDD+LI AK +  +  LK QL S F MKDLGAA+ ILG+ +TR ++  
Sbjct: 993  -VNGSPIYLLLYVDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNSG 1051

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
            LL+LSQ+ YI+KVL  FNM +AKP+  P+ P+ K+S   C  + E+   M  VP +SA G
Sbjct: 1052 LLFLSQQSYIKKVLQCFNMHDAKPVSTPIAPHFKLSALQCANTDEDVEYMSRVPYSSAVG 1111

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +R D++HA+
Sbjct: 1112 SLMYAMVCSRPDLSHAM 1128


>tr|Q0J4E9|Q0J4E9_ORYSJ Os08g0518300 protein OS=Oryza sativa subsp.
            japonica GN=Os08g0518300 PE=4 SV=1
          Length = 1755

 Score =  228 bits (580), Expect = 3e-58
 Identities = 115/197 (58%), Positives = 146/197 (74%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM+QPEGFV+PGKE++VC L +SLYGLKQS RQWYK+FD FML   ++RS+ D C+Y K 
Sbjct: 1294 YMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKV 1353

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              DGS I L+LYVDDMLI AK +S ++ LK QL S F MKDLGAA+ ILG+ +TR+R   
Sbjct: 1354 -VDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSG 1412

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             LYLSQ+ Y EKVL RFNM +AKP+  PL  + ++S D CP+S  +   M  VP +SA G
Sbjct: 1413 KLYLSQKCYSEKVLRRFNMHDAKPVSTPLAAHFRLSLDLCPQSYYDVEYMSRVPYSSAVG 1472

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +R D++HA+
Sbjct: 1473 SLMYAMVCSRPDLSHAL 1489


>tr|Q53ND1|Q53ND1_ORYSJ Os11g0157000 protein OS=Oryza sativa subsp.
            japonica GN=Os11g0157000 PE=4 SV=1
          Length = 2340

 Score =  227 bits (579), Expect = 4e-58
 Identities = 115/197 (58%), Positives = 146/197 (74%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM+QP+GFV+PGKE++VC L +SLYGLKQS RQWYK+FD FML   ++RS+ D C+Y K 
Sbjct: 1150 YMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKV 1209

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              DGS I L+LYVDDMLI AK +S +  LK QL S F MKDLGAA+ ILG+ +TR+R   
Sbjct: 1210 -VDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSF 1268

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             LYLSQ+ YIEKVL RFNM +AKP+  PL  + ++S D CP+S  +   M  VP +SA G
Sbjct: 1269 KLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVG 1328

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +R D++HA+
Sbjct: 1329 SLMYAMVCSRPDLSHAL 1345


>tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_035336 PE=4 SV=1
          Length = 1244

 Score =  226 bits (576), Expect = 8e-58
 Identities = 116/197 (58%), Positives = 143/197 (72%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++ G+E++VC L +SLYGLKQ+ RQWYKKFD FM + G+KR  ADHC Y K 
Sbjct: 855  YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVK- 913

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              D S IIL+LYVDDMLIV      ++ LK QL   F+MKDLGAA+ ILG+R+ R +   
Sbjct: 914  SFDNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANG 973

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             L LSQ +Y++KVL RFNM EAKP+  PL  + K+SK+  PK++EE + M  VP ASA G
Sbjct: 974  TLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDXMSKVPYASAIG 1033

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV TR DIAHAV
Sbjct: 1034 SLMYAMVCTRPDIAHAV 1050


>tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_023139 PE=4 SV=1
          Length = 1222

 Score =  226 bits (576), Expect = 8e-58
 Identities = 116/197 (58%), Positives = 143/197 (72%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++ G+E++VC L +SLYGLKQ+ RQWYKKFD FM + G+KR  ADHC Y K 
Sbjct: 833  YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVK- 891

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              D S IIL+LYVDDMLIV      ++ LK QL   F+MKDLGAA+ ILG+R+ R +   
Sbjct: 892  SFDNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANG 951

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             L LSQ +Y++KVL RFNM EAKP+  PL  + K+SK+  PK++EE + M  VP ASA G
Sbjct: 952  TLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIG 1011

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV TR DIAHAV
Sbjct: 1012 SLMYAMVCTRPDIAHAV 1028


>tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_005765 PE=4 SV=1
          Length = 1261

 Score =  226 bits (576), Expect = 8e-58
 Identities = 116/197 (58%), Positives = 143/197 (72%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM QPEGF++ G+E++VC L +SLYGLKQ+ RQWYKKFD FM + G+KR  ADHC Y K 
Sbjct: 872  YMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFK- 930

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              D S IIL+LYVDDMLI       ++ LK QL   F+MKDLGAA+ ILG+R+ R +   
Sbjct: 931  SFDNSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANG 990

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             L LSQ +Y++KVL RFNM EAKP+  PL  + K+SK+  PK++EE + M  VP ASA G
Sbjct: 991  TLKLSQSEYVKKVLXRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDXMSKVPYASAIG 1050

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV TRLDIAHAV
Sbjct: 1051 SLMYAMVCTRLDIAHAV 1067


>tr|Q6L4X8|Q6L4X8_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
            japonica GN=OSJNBb0108E17.1 PE=4 SV=1
          Length = 1211

 Score =  226 bits (575), Expect = 1e-57
 Identities = 114/197 (57%), Positives = 144/197 (73%)
 Frame = +3

Query: 15   YMKQPEGFVIPGKEHMVCMLNRSLYGLKQSCRQWYKKFDCFMLKHGYKRSHADHCLYTKR 194
            YM+QPEGFV+PGKE++V  L +SLYGLKQS RQWYK+FD FM    ++RS+ D C+Y K 
Sbjct: 822  YMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKV 881

Query: 195  DEDGSPIILVLYVDDMLIVAKKRSTVDALKGQLKSAFSMKDLGAAEHILGVRVTRQRDKR 374
              DGS I L+LYVDDMLI AK +S ++ LK QL S F MKDLGAA+ ILG+ +TR+R   
Sbjct: 882  -VDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSG 940

Query: 375  LLYLSQEKYIEKVLDRFNMAEAKPLGVPLQPYVKISKDDCPKSKEEANDMQSVP*ASACG 554
             LYLSQ+ YIEKVL RFNM +AKP+  PL  + ++S D CP+S  +   M  VP  S  G
Sbjct: 941  KLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVG 1000

Query: 555  SLMYAMVATRLDIAHAV 605
            SLMYAMV +RLD++HA+
Sbjct: 1001 SLMYAMVCSRLDLSHAL 1017