BP915090
Clone id YMU001_000066_D05
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000066_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTGCAGAAGTGATTTAATATGAAAGAGGAAAATGATAGCTATAACACTAACTTAGAGAT
TAAGCTGGAAGATTGTTGTGATGGTTGGTTGTTGCCGCCGCTGATGAAAAGTAAGTGCAT
GGGCGAAAAAATGAACACACGTGTCTGATGTTGGGACATCTACGTGGATACACAGCAAAT
GCATGGAAAACAATATGCTCTGCCAATAGAGGCGATTGATGGGTGCCTCAAAAAGTAGGA
GGCGAAAATGTATCAAATGTGTAGTATAATATGGCAGAGAGCCAAGAGAGCTCATCTTCA
ACATTATCACTCCATTCATATTAGAATAACAACAATTCTAGGATGAAAGATTTGCACAAT
ATGGTCAGTAAGTAGTTCTAAGGTTAGCATTTCAAGAATCAAATTTTATTTGCTACAGTA
TAATATAGAGGACATCCCGTTAAGAAACGTACCCAATACTCCATTCATCGGAGTTCGTAT
TTCATGAGACAC
■■Homology search results ■■ -
sp_hit_id Q54YZ9
Definition sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum
Align length 14
Score (bit) 30.4
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915090|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D05.
(492 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase... 30 4.6
sp|P39928|SLN1_YEAST Osmosensing histidine protein kinase SLN1 O... 30 6.0
sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase lux... 30 6.0
sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase lux... 30 6.0
sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae... 30 6.0
sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase lux... 30 7.9
sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase lux... 30 7.9
sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase lux... 30 7.9

>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J
OS=Dictyostelium discoideum GN=dhkJ PE=3 SV=2
Length = 2062

Score = 30.4 bits (67), Expect = 4.6
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTPMNG++G
Sbjct: 1354 MSHEIRTPMNGIIG 1367


>sp|P39928|SLN1_YEAST Osmosensing histidine protein kinase SLN1
OS=Saccharomyces cerevisiae GN=SLN1 PE=1 SV=1
Length = 1220

Score = 30.0 bits (66), Expect = 6.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHE+RTP+NG+LG
Sbjct: 574 ISHELRTPLNGILG 587


>sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase luxQ
OS=Vibrio vulnificus (strain YJ016) GN=luxQ PE=3 SV=1
Length = 857

Score = 30.0 bits (66), Expect = 6.0
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTP+NG+LG
Sbjct: 491 MSHEIRTPLNGILG 504


>sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase luxQ
OS=Vibrio vulnificus GN=luxQ PE=3 SV=1
Length = 857

Score = 30.0 bits (66), Expect = 6.0
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTP+NG+LG
Sbjct: 491 MSHEIRTPLNGILG 504


>sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae
pv. syringae GN=gacS PE=3 SV=1
Length = 907

Score = 30.0 bits (66), Expect = 6.0
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTP+NG+LG
Sbjct: 282 MSHEIRTPLNGILG 295


>sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase luxQ
OS=Vibrio parahaemolyticus GN=luxQ PE=3 SV=1
Length = 858

Score = 29.6 bits (65), Expect = 7.9
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTP+NG+LG
Sbjct: 489 MSHEIRTPINGILG 502


>sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase luxQ
OS=Vibrio harveyi GN=luxQ PE=1 SV=1
Length = 859

Score = 29.6 bits (65), Expect = 7.9
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHEIRTP+NG+LG
Sbjct: 490 MSHEIRTPINGILG 503


>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase luxQ
OS=Vibrio cholerae GN=luxQ PE=3 SV=1
Length = 857

Score = 29.6 bits (65), Expect = 7.9
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLG 451
+SHE+RTP+NGVLG
Sbjct: 487 MSHELRTPLNGVLG 500


tr_hit_id A3IAH8
Definition tr|A3IAH8|A3IAH8_9BACI Low temperature requirement protein A OS=Bacillus sp. B14905
Align length 104
Score (bit) 36.2
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915090|Adiantum capillus-veneris mRNA, clone:
YMU001_000066_D05.
(492 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3IAH8|A3IAH8_9BACI Low temperature requirement protein A OS=... 36 0.84
tr|Q9KR16|Q9KR16_VIBCH Sensor protein OS=Vibrio cholerae GN=VC_1... 33 5.6
tr|Q9KLN4|Q9KLN4_VIBCH Sensor protein OS=Vibrio cholerae GN=VC_A... 33 5.6
tr|Q8DAL4|Q8DAL4_VIBVU Sensor protein OS=Vibrio vulnificus GN=VV... 33 5.6
tr|Q8D7M7|Q8D7M7_VIBVU Sensor protein OS=Vibrio vulnificus GN=VV... 33 5.6
tr|Q87QT0|Q87QT0_VIBPA Sensor protein OS=Vibrio parahaemolyticus... 33 5.6
tr|Q87ID1|Q87ID1_VIBPA Sensor protein OS=Vibrio parahaemolyticus... 33 5.6
tr|Q7MJ98|Q7MJ98_VIBVY Sensor protein OS=Vibrio vulnificus (stra... 33 5.6
tr|Q7MEN6|Q7MEN6_VIBVY Sensor protein OS=Vibrio vulnificus (stra... 33 5.6
tr|A7N2T5|A7N2T5_VIBHB Sensor protein OS=Vibrio harveyi (strain ... 33 5.6
tr|A7MTL2|A7MTL2_VIBHB Sensor protein OS=Vibrio harveyi (strain ... 33 5.6
tr|A5F767|A5F767_VIBC3 Sensor protein OS=Vibrio cholerae serotyp... 33 5.6
tr|A5EZV6|A5EZV6_VIBC3 Sensor protein OS=Vibrio cholerae serotyp... 33 5.6
tr|Q2C2D3|Q2C2D3_9GAMM Sensor protein OS=Photobacterium sp. SKA3... 33 5.6
tr|Q1ZSC7|Q1ZSC7_9VIBR Sensor protein OS=Vibrio angustum S14 GN=... 33 5.6
tr|Q1Z0V6|Q1Z0V6_PHOPR Sensor protein OS=Photobacterium profundu... 33 5.6
tr|Q1V5Y5|Q1V5Y5_VIBAL Sensor protein OS=Vibrio alginolyticus 12... 33 5.6
tr|Q1V5I5|Q1V5I5_VIBAL Sensor protein OS=Vibrio alginolyticus 12... 33 5.6
tr|B8K6Z9|B8K6Z9_VIBPA TMAO reductase sytem sensor TorS OS=Vibri... 33 5.6
tr|B8K5J8|B8K5J8_VIBPA Signal transduction histidine kinase OS=V... 33 5.6
tr|B7VS34|B7VS34_VIBSP Signal transduction histidine kinase OS=V... 33 5.6
tr|B7VMK5|B7VMK5_VIBSP Signal transduction histidine kinase OS=V... 33 5.6
tr|A8T5P9|A8T5P9_9VIBR Sensor protein OS=Vibrio campbellii AND4 ... 33 5.6
tr|A8T4M3|A8T4M3_9VIBR Sensor protein OS=Vibrio campbellii AND4 ... 33 5.6
tr|A7K4V5|A7K4V5_9VIBR Sensor protein OS=Vibrio sp. Ex25 GN=VEx2... 33 5.6
tr|A7K4G9|A7K4G9_9VIBR Sensor protein OS=Vibrio sp. Ex25 GN=torS... 33 5.6
tr|A6Y4N0|A6Y4N0_VIBCH Sensor protein (Fragment) OS=Vibrio chole... 33 5.6
tr|A6Y0U3|A6Y0U3_VIBCH Sensor protein OS=Vibrio cholerae RC385 G... 33 5.6
tr|A6XTZ6|A6XTZ6_VIBCH Sensor protein OS=Vibrio cholerae AM-1922... 33 5.6
tr|A6XSJ6|A6XSJ6_VIBCH Sensor protein OS=Vibrio cholerae AM-1922... 33 5.6

>tr|A3IAH8|A3IAH8_9BACI Low temperature requirement protein A
OS=Bacillus sp. B14905 GN=BB14905_14625 PE=4 SV=1
Length = 265

Score = 36.2 bits (82), Expect = 0.84
Identities = 22/104 (21%), Positives = 45/104 (43%)
Frame = -3

Query: 328 YSNMNGVIMLKMSSLGSLPYYTTHLIHFRLLLFEAPINRLYWQSILFSMHLLCIHVDVPT 149
+ N+ + + + G Y + L + A I L+ + +S L I V
Sbjct: 141 FENVEKKVDKSIETSGQTIIYGHLFVLMSLSMIAASIKLLFLNEVRYSFDLYFIFGSV-- 198

Query: 148 SDTCVHFFAHALTFHQRRQQPTITTIFQLNL*VSVIAIIFLFHI 17
C++F ++ FHQ R + T++ L L + ++A F+ ++
Sbjct: 199 ---CLYFMTTSIVFHQYRFKQDRLTLYHLTLFIGILATFFIINL 239


>tr|Q9KR16|Q9KR16_VIBCH Sensor protein OS=Vibrio cholerae GN=VC_1831
PE=4 SV=1
Length = 736

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 364 LSHEIRTPMNGVLGT 378


>tr|Q9KLN4|Q9KLN4_VIBCH Sensor protein OS=Vibrio cholerae
GN=VC_A0709 PE=3 SV=1
Length = 1020

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 513 MSHEIRTPMNGVLGT 527


>tr|Q8DAL4|Q8DAL4_VIBVU Sensor protein OS=Vibrio vulnificus
GN=VV1_2179 PE=4 SV=1
Length = 773

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 328 LSHEIRTPMNGVLGT 342


>tr|Q8D7M7|Q8D7M7_VIBVU Sensor protein OS=Vibrio vulnificus
GN=VV2_0125 PE=3 SV=1
Length = 970

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 478 MSHEIRTPMNGVLGT 492


>tr|Q87QT0|Q87QT0_VIBPA Sensor protein OS=Vibrio parahaemolyticus
GN=VP1069 PE=3 SV=1
Length = 806

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 360 LSHEIRTPMNGVLGT 374


>tr|Q87ID1|Q87ID1_VIBPA Sensor protein OS=Vibrio parahaemolyticus
GN=VPA0675 PE=3 SV=1
Length = 988

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 477 MSHEIRTPMNGVLGT 491


>tr|Q7MJ98|Q7MJ98_VIBVY Sensor protein OS=Vibrio vulnificus (strain
YJ016) GN=VV2264 PE=4 SV=1
Length = 805

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 360 LSHEIRTPMNGVLGT 374


>tr|Q7MEN6|Q7MEN6_VIBVY Sensor protein OS=Vibrio vulnificus (strain
YJ016) GN=VVA0633 PE=3 SV=1
Length = 984

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 492 MSHEIRTPMNGVLGT 506


>tr|A7N2T5|A7N2T5_VIBHB Sensor protein OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=VIBHAR_06119 PE=3 SV=1
Length = 985

Score = 33.5 bits (75), Expect = 5.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1

Query: 492 VSHEIRTPMNGVLGT 448
+SHEIRTPMNGVLGT
Sbjct: 477 MSHEIRTPMNGVLGT 491