BP915041
Clone id YMU001_000065_G10
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GACAAAAAGAGAAGGAGAGCTTATTACTGAAGAAGTCACATCAGAAAGGCGCAGCTCATT
GGGACTCAACAATGGTGTCTTTGGGCAAGCAATCGACCTTCTTAAAGAGGGGTATGTGGT
TGCTCTACGAGCAGCAGGTGGGGCTGGGTATCATGTGGCAAGGCAGCGTGGCCCAGGCCG
TGGATGGTGCCTTGACACAATGTCGAATGTAACCATCCGAGATCCAGCAGCTCAATTTCT
AGTGGTCTTACGCAATCGGGATAGGATTGGACTGCGGTCTTTGGCAGCTGGTGGAAAACT
TTTACAGGCCAACAAAAAGCTGGAGCTTGTGTTTGTTAATCATACCTTTGATGTTTGGGA
GAGTTGGATGTTAGAAGGTACTGTCTTACAGGAATGCAGACTTACTAACAGCAAGTTTCG
TACCGTTTCGTTGGATGTTGCTGTGGAGATTCTAGCAGTGATTGGCGAAGAGGATGGAGT
GGCACGGTGGTTGAGCTGACCTTGAGTAAGTTGACGAGATACATCAGAATGGGCTTGTCT
GCAATCCAGTTGTAGTGCTGATGACCAT
■■Homology search results ■■ -
sp_hit_id Q9BUN5
Definition sp|Q9BUN5|CC28B_HUMAN Coiled-coil domain-containing protein 28B OS=Homo sapiens
Align length 41
Score (bit) 35.4
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915041|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_G10.
(568 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9BUN5|CC28B_HUMAN Coiled-coil domain-containing protein 28B ... 35 0.20
sp|Q01036|VG51_SHV21 Gene 51 glycoprotein OS=Saimiriine herpesvi... 32 2.9
sp|Q8XUB7|ALLC_RALSO Probable allantoicase OS=Ralstonia solanace... 32 2.9
sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit OS=Saccharom... 30 6.4

>sp|Q9BUN5|CC28B_HUMAN Coiled-coil domain-containing protein 28B
OS=Homo sapiens GN=CCDC28B PE=2 SV=1
Length = 241

Score = 35.4 bits (80), Expect = 0.20
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3

Query: 401 VCIPVRQYLLTSNSPKHQRYD*QTQAPAFCWPVKVFHQLPK 279
VC+P R S+SP Q Y T P C PV+ H+LPK
Sbjct: 193 VCVPERS---VSSSPALQEYSHTTNFPTSCSPVRFSHRLPK 230


>sp|Q01036|VG51_SHV21 Gene 51 glycoprotein OS=Saimiriine herpesvirus
2 (strain 11) GN=51 PE=4 SV=1
Length = 269

Score = 31.6 bits (70), Expect = 2.9
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Frame = -2

Query: 501 GQLNHRATPSSSPITARIST----ATSNETVRNLLLVSLHSCKTVP-----SNIQLSQTS 349
G++ + SS ITA ++T + +N+T +N+ + ++ S T P SN SQT+
Sbjct: 26 GEVFLQKVSSSVSITASLATTMLTSVTNKTTQNVSVTTIDSLSTSPMHNATSNTSYSQTT 85

Query: 348 KV*LTNTSSSFLLA 307
T+ SSS L++
Sbjct: 86 PYSQTSLSSSVLIS 99


>sp|Q8XUB7|ALLC_RALSO Probable allantoicase OS=Ralstonia
solanacearum GN=alc PE=3 SV=1
Length = 336

Score = 31.6 bits (70), Expect = 2.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2

Query: 65 LNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSN 208
+NN FG A LL G + + G G+ R+R PG WC+ +++
Sbjct: 199 VNNQHFGLASSLLMPGRGINM----GDGWETRRRREPGNDWCIIALAH 242


>sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit
OS=Saccharomyces cerevisiae GN=AGA1 PE=1 SV=1
Length = 725

Score = 30.4 bits (67), Expect = 6.4
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -2

Query: 477 PSSSPITARISTATSNETVRNLLLVSLHSCKTVPSNIQLSQTSKV*LTNTSSS 319
PSS+ I + +++ S+ T N SL S T PS+ S +S T+TSSS
Sbjct: 160 PSSASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSS----TSTSSS 208


tr_hit_id Q7XAP1
Definition tr|Q7XAP1|Q7XAP1_MARPO C-terminal binding protein OS=Marchantia polymorpha
Align length 138
Score (bit) 226.0
E-value 5.0e-58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915041|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_G10.
(568 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XAP1|Q7XAP1_MARPO C-terminal binding protein OS=Marchantia ... 226 5e-58
tr|Q7XAP0|Q7XAP0_MARPO C-terminal binding protein OS=Marchantia ... 224 2e-57
tr|A9U1D5|A9U1D5_PHYPA Predicted protein (Fragment) OS=Physcomit... 221 2e-56
tr|A9TKR3|A9TKR3_PHYPA Predicted protein OS=Physcomitrella paten... 211 2e-53
tr|B3XZL7|B3XZL7_9CONI Carboxy-terminal binding protein OS=Larix... 210 4e-53
tr|A7PZI9|A7PZI9_VITVI Chromosome chr15 scaffold_40, whole genom... 179 1e-43
tr|Q8LN38|Q8LN38_ORYSJ Os10g0533000 protein OS=Oryza sativa subs... 172 1e-41
tr|Q10SD4|Q10SD4_ORYSJ C-terminal binding protein OS=Oryza sativ... 172 1e-41
tr|Q0DVK1|Q0DVK1_ORYSJ Os03g0126100 protein (Fragment) OS=Oryza ... 172 1e-41
tr|B8BI01|B8BI01_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41
tr|B8AMF2|B8AMF2_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41
tr|A3C6S4|A3C6S4_ORYSJ Putative uncharacterized protein OS=Oryza... 172 1e-41
tr|B6U1W6|B6U1W6_MAIZE Angustifolia OS=Zea mays PE=2 SV=1 170 6e-41
tr|Q948X7|Q948X7_ARATH C-terminal binding protein OS=Arabidopsis... 167 5e-40
tr|Q7DLS3|Q7DLS3_ARATH DNA, 40 kb surrounding ACS1 locus OS=Arab... 167 5e-40
tr|O23702|O23702_ARATH Dehydrogenase OS=Arabidopsis thaliana GN=... 167 5e-40
tr|O03984|O03984_ARATH Putative dehydrogenase (Fragment) OS=Arab... 167 5e-40
tr|Q93YQ6|Q93YQ6_ARATH Putative uncharacterized protein (Putativ... 166 1e-39
tr|Q84JM5|Q84JM5_IPONI Angustifolia OS=Ipomoea nil GN=IAN PE=2 SV=1 162 9e-39
tr|Q8S5W4|Q8S5W4_ORYSJ Putative C-terminal binding protein OS=Or... 161 3e-38
tr|A3ADP2|A3ADP2_ORYSJ Putative uncharacterized protein OS=Oryza... 161 3e-38
tr|Q9LMM9|Q9LMM9_ARATH F22L4.6 protein OS=Arabidopsis thaliana G... 160 5e-38
tr|A5AX58|A5AX58_VITVI Putative uncharacterized protein OS=Vitis... 114 4e-24
tr|A4S6N4|A4S6N4_OSTLU Predicted protein OS=Ostreococcus lucimar... 52 2e-05
tr|Q00WW2|Q00WW2_OSTTA Inframe stop codon OS=Ostreococcus tauri ... 49 2e-04
tr|A8HQ57|A8HQ57_CHLRE Predicted protein OS=Chlamydomonas reinha... 40 0.069
tr|A4SAN0|A4SAN0_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.090
tr|A8PZJ0|A8PZJ0_MALGO Putative uncharacterized protein OS=Malas... 39 0.26
tr|Q2SGT7|Q2SGT7_HAHCH Nitrous oxidase accessory protein OS=Hahe... 37 0.59
tr|Q6CE89|Q6CE89_YARLI YALI0B17622p OS=Yarrowia lipolytica GN=YA... 37 0.59

>tr|Q7XAP1|Q7XAP1_MARPO C-terminal binding protein OS=Marchantia
polymorpha GN=MpAN PE=4 SV=1
Length = 688

Score = 226 bits (577), Expect = 5e-58
Identities = 109/138 (78%), Positives = 123/138 (89%)
Frame = +2

Query: 83 GQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNVTIRDPAAQFLVVLRNRD 262
G A+D LKEG +VALRA GY+VARQ+GPGRGW LDTM +VT RDPAAQFLVV+RNRD
Sbjct: 551 GAALDYLKEGQIVALRARADGGYYVARQKGPGRGWRLDTMVDVTCRDPAAQFLVVVRNRD 610

Query: 263 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVLQECRLTNSKFRTVSLDVA 442
RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESW++EG+ L++C LTNSKFR VSLDV+
Sbjct: 611 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWIVEGSTLEDCTLTNSKFRGVSLDVS 670

Query: 443 VEILAVIGEEDGVARWLS 496
+EILA +GEEDGV RWLS
Sbjct: 671 IEILAAVGEEDGVVRWLS 688


>tr|Q7XAP0|Q7XAP0_MARPO C-terminal binding protein OS=Marchantia
polymorpha GN=MpAN PE=2 SV=1
Length = 688

Score = 224 bits (572), Expect = 2e-57
Identities = 108/138 (78%), Positives = 122/138 (88%)
Frame = +2

Query: 83 GQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNVTIRDPAAQFLVVLRNRD 262
G A+D LKEG +VALRA GY+VARQ+GPGRGW LDTM +VT RDP AQFLVV+RNRD
Sbjct: 551 GAALDYLKEGQIVALRARADGGYYVARQKGPGRGWRLDTMVDVTCRDPRAQFLVVVRNRD 610

Query: 263 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVLQECRLTNSKFRTVSLDVA 442
RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESW++EG+ L++C LTNSKFR VSLDV+
Sbjct: 611 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWIVEGSTLEDCTLTNSKFRGVSLDVS 670

Query: 443 VEILAVIGEEDGVARWLS 496
+EILA +GEEDGV RWLS
Sbjct: 671 IEILAAVGEEDGVVRWLS 688


>tr|A9U1D5|A9U1D5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_30727 PE=4 SV=1
Length = 622

Score = 221 bits (563), Expect = 2e-56
Identities = 106/137 (77%), Positives = 120/137 (87%)
Frame = +2

Query: 83 GQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNVTIRDPAAQFLVVLRNRD 262
G AID LKEGYVVAL G GY+VARQRGPGRGWCLD M +VT RDPA+QFLVV+RNRD
Sbjct: 486 GFAIDQLKEGYVVALHGVSGGGYYVARQRGPGRGWCLDIMFDVTPRDPASQFLVVVRNRD 545

Query: 263 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVLQECRLTNSKFRTVSLDVA 442
RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESW++EG L C LTNS+FR+V+L V+
Sbjct: 546 RIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWIVEGRHLDNCSLTNSRFRSVTLQVS 605

Query: 443 VEILAVIGEEDGVARWL 493
++ILA +GEEDG+ARWL
Sbjct: 606 MKILAAVGEEDGIARWL 622


>tr|A9TKR3|A9TKR3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_94037 PE=4 SV=1
Length = 605

Score = 211 bits (537), Expect = 2e-53
Identities = 107/161 (66%), Positives = 122/161 (75%), Gaps = 23/161 (14%)
Frame = +2

Query: 83 GQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNVTIRDPAAQFLVVLRNRD 262
G AID LKEG+VVAL A G GY+VARQRGPGRGWCLD + +VT RDPA+QFLVV+RNRD
Sbjct: 445 GYAIDQLKEGFVVALHAVSGGGYYVARQRGPGRGWCLDILFDVTPRDPASQFLVVVRNRD 504

Query: 263 RIGLRSLAAGGKLLQ-----------------------ANKKLELVFVNHTFDVWESWML 373
RIGLRSLAAGGKLLQ ANKKLELVFVNHTFDVWESW++
Sbjct: 505 RIGLRSLAAGGKLLQVSVDLMFFKRHHVTFHFFDPALEANKKLELVFVNHTFDVWESWIV 564

Query: 374 EGTVLQECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWLS 496
EG L C LTNS+FR+V+L V++EILA +GEEDG+ARWLS
Sbjct: 565 EGRQLDNCSLTNSRFRSVTLQVSMEILAAVGEEDGIARWLS 605


>tr|B3XZL7|B3XZL7_9CONI Carboxy-terminal binding protein OS=Larix
gmelinii GN=LgAN PE=2 SV=1
Length = 646

Score = 210 bits (535), Expect = 4e-53
Identities = 100/157 (63%), Positives = 128/157 (81%)
Frame = +2

Query: 26 TEEVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMS 205
T + SE++S + G +GQ DLLK+G V++LRA AGYHV+RQRGPG GW LDTMS
Sbjct: 492 TVDTASEKQSVT--SKGPYGQTGDLLKDGLVISLRAKDRAGYHVSRQRGPGGGWVLDTMS 549

Query: 206 NVTIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTV 385
NVT RDPAAQFLVV R+++RIGLRSLAAGGKLLQ N+K+E+ F +H FD WE+W+LEG+
Sbjct: 550 NVTKRDPAAQFLVVFRSKERIGLRSLAAGGKLLQVNRKMEVAFASHNFDAWENWILEGST 609

Query: 386 LQECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWLS 496
L+ECRL N++ +V+LDV++EILA +GEEDG+ARWLS
Sbjct: 610 LEECRLINTRSPSVALDVSIEILAAVGEEDGIARWLS 646


>tr|A7PZI9|A7PZI9_VITVI Chromosome chr15 scaffold_40, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026896001
PE=4 SV=1
Length = 644

Score = 179 bits (454), Expect = 1e-43
Identities = 93/155 (60%), Positives = 112/155 (72%)
Frame = +2

Query: 29 EEVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSN 208
+E TSE+ + G+ LLK+GYV+AL A A HV+RQR G GW LDTMSN
Sbjct: 492 QESTSEQLLKSSMRLSKPGEV--LLKDGYVIALHARDRAALHVSRQRVQGGGWFLDTMSN 549

Query: 209 VTIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVL 388
VT RDPAAQFL+ R++D IGLRS AAGGKLLQ N+++E VF +H+FDVWESWMLEG+ L
Sbjct: 550 VTKRDPAAQFLIAFRSKDTIGLRSFAAGGKLLQINRRMEFVFASHSFDVWESWMLEGS-L 608

Query: 389 QECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWL 493
+ECRL N + LDV VEILA +GEEDGV RWL
Sbjct: 609 EECRLVNCRNPLAVLDVRVEILAAVGEEDGVTRWL 643


>tr|Q8LN38|Q8LN38_ORYSJ Os10g0533000 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0053C23.2 PE=2 SV=1
Length = 650

Score = 172 bits (436), Expect = 1e-41
Identities = 84/154 (54%), Positives = 111/154 (72%)
Frame = +2

Query: 32 EVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNV 211
E+ SE + + GL+ + ++ LK+G+VVALR +G+HVAR+R G GW LD +S
Sbjct: 500 EIISENKLTAGLSI----KPLERLKDGFVVALRTRDNSGFHVARERVAGVGWYLDVVSKA 555

Query: 212 TIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVLQ 391
T RDPAAQFL+ RN+D +GLRS AGGKLLQ NK +ELVF +++FDVWESW LEG++L
Sbjct: 556 TKRDPAAQFLITFRNKDTMGLRSFVAGGKLLQVNKTMELVFASYSFDVWESWTLEGSLLD 615

Query: 392 ECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWL 493
C+L N K +V L+V +EILA + EEDGV RWL
Sbjct: 616 CCKLVNRKIPSVVLEVYIEILAAVSEEDGVTRWL 649


>tr|Q10SD4|Q10SD4_ORYSJ C-terminal binding protein OS=Oryza sativa
subsp. japonica GN=LOC_Os03g03460 PE=2 SV=1
Length = 424

Score = 172 bits (436), Expect = 1e-41
Identities = 87/155 (56%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +2

Query: 32 EVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQR-GPGRGWCLDTMSN 208
E+TSE + L + D LK+G+VVALR +G+HVARQR G GW LD +SN
Sbjct: 273 EITSETKLPTVLRR----KYPDTLKDGFVVALRTKDNSGFHVARQRLAGGGGWILDIVSN 328

Query: 209 VTIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVL 388
T RDPAAQFLV +N+D +GLRS AGGKLLQ N+++E VF +HTFDVWESWMLEG++L
Sbjct: 329 ATNRDPAAQFLVTFKNKDTMGLRSFVAGGKLLQINRRMEFVFASHTFDVWESWMLEGSLL 388

Query: 389 QECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWL 493
+ C+L N + + LDV +EILA EEDGV RWL
Sbjct: 389 EGCKLINCRNSSAVLDVCIEILAAASEEDGVTRWL 423


>tr|Q0DVK1|Q0DVK1_ORYSJ Os03g0126100 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os03g0126100 PE=4 SV=1
Length = 439

Score = 172 bits (436), Expect = 1e-41
Identities = 87/155 (56%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +2

Query: 32 EVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQR-GPGRGWCLDTMSN 208
E+TSE + L + D LK+G+VVALR +G+HVARQR G GW LD +SN
Sbjct: 288 EITSETKLPTVLRR----KYPDTLKDGFVVALRTKDNSGFHVARQRLAGGGGWILDIVSN 343

Query: 209 VTIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVL 388
T RDPAAQFLV +N+D +GLRS AGGKLLQ N+++E VF +HTFDVWESWMLEG++L
Sbjct: 344 ATNRDPAAQFLVTFKNKDTMGLRSFVAGGKLLQINRRMEFVFASHTFDVWESWMLEGSLL 403

Query: 389 QECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWL 493
+ C+L N + + LDV +EILA EEDGV RWL
Sbjct: 404 EGCKLINCRNSSAVLDVCIEILAAASEEDGVTRWL 438


>tr|B8BI01|B8BI01_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34449 PE=4 SV=1
Length = 576

Score = 172 bits (436), Expect = 1e-41
Identities = 84/154 (54%), Positives = 111/154 (72%)
Frame = +2

Query: 32 EVTSERRSSLGLNNGVFGQAIDLLKEGYVVALRAAGGAGYHVARQRGPGRGWCLDTMSNV 211
E+ SE + + GL+ + ++ LK+G+VVALR +G+HVAR+R G GW LD +S
Sbjct: 426 EIISENKLTAGLSI----KPLERLKDGFVVALRTRDNSGFHVARERVAGVGWYLDVVSKA 481

Query: 212 TIRDPAAQFLVVLRNRDRIGLRSLAAGGKLLQANKKLELVFVNHTFDVWESWMLEGTVLQ 391
T RDPAAQFL+ RN+D +GLRS AGGKLLQ NK +ELVF +++FDVWESW LEG++L
Sbjct: 482 TKRDPAAQFLITFRNKDTMGLRSFVAGGKLLQVNKTMELVFASYSFDVWESWTLEGSLLD 541

Query: 392 ECRLTNSKFRTVSLDVAVEILAVIGEEDGVARWL 493
C+L N K +V L+V +EILA + EEDGV RWL
Sbjct: 542 CCKLVNRKIPSVVLEVYIEILAAVSEEDGVTRWL 575