NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914984
Clone id YMU001_000065_B08
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTGACCTCAACAAAGATCTATCCAACAAGTGTCGAACTCAAGACCTCTT
ATTCAAGAGGGGATTGGGATAAGCAATCTACCACACTTCCGTGATAGAAAAGTTATTCCT
ATTTCCTCTTCTTAATTACACACACACACACCCATATGAGAGAGAGAGAGAGAGAGAGCT
CTGTATTTGAGCTTCACAACCAACAGCACTTGCACATGCATTGAATTACATTGCCTGAAT
CCAAACAAAATGGATATATATTTACACAAGGTTGCTTTTTCATATGCATAAAAGCAACCC
TAAACAGAGTTGCACATACAACACCATAGCATTTCACTCATTTCAGATAAAAGCTCTGCT
TTGCAAGGAACAAAGGCTGATCCATTTCGCTCGCTGTCTACACCATCTAGAGTTTCAGCG
CAACTCTCCAACAGGGGCTTCACTGAGCCAAAGAAAGTGTATGAAGTCGTATAATTTTGC
GGTTACACTAACCTTGTAAGGCGTCGGATTCAAACTGCGAAGATGATCGA
■■Homology search results ■■ -
sp_hit_id Q9VQX4
Definition sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
Align length 36
Score (bit) 59.3
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914984|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_B08.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Dro...    59   1e-08
sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Cae...    59   2e-08
sp|Q9DAZ9|ZFY19_MOUSE Zinc finger FYVE domain-containing protein...    33   0.80 
sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 ...    30   6.7  
sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 ...    30   8.8  

>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase
           OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2
          Length = 555

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGEL 408
           DH R+LNPTPYKV+V+  LY+FIH LWL  AP+GEL
Sbjct: 519 DHKRTLNPTPYKVAVSDNLYNFIHDLWLQNAPIGEL 554


>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase
           OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=2
          Length = 563

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGEL 408
           DH R LNPTPYKVSV+ +LY F+H LWL  AP+G+L
Sbjct: 527 DHRRYLNPTPYKVSVSERLYQFLHTLWLQNAPIGQL 562


>sp|Q9DAZ9|ZFY19_MOUSE Zinc finger FYVE domain-containing protein 19
           OS=Mus musculus GN=Zfyve19 PE=1 SV=1
          Length = 389

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -1

Query: 370 GSAFVPCKAEL---LSEMSEMLWCCMCN 296
           GS   PCKAE+    +E  E+ WCC+CN
Sbjct: 316 GSRAQPCKAEMEGPQAEEEELPWCCICN 343


>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3
           PE=2 SV=1
          Length = 904

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 14/62 (22%)
 Frame = +3

Query: 297 LHIQHHSISLISDK--------------SSALQGTKADPFRSLSTPSRVSAQLSNRGFTE 434
           L++QH+ IS +SDK              S+++Q  K DPF++L   + +   LS+ G + 
Sbjct: 105 LNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLK--NLIKLDLSHNGLSS 162

Query: 435 PK 440
            K
Sbjct: 163 TK 164


>sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204
           OS=Homo sapiens PE=2 SV=2
          Length = 223

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +2

Query: 122 ITHTHTHMRERERESSVFELHNQQHLHMH*ITLPESKQNGYIFTQGCF 265
           ITH HTH       S++       H HMH      S   GYI  Q  F
Sbjct: 167 ITHMHTHTHMHTHTSTLTRTLTLTHTHMHTFLSLVSHLAGYISCQFIF 214
tr_hit_id B8LLD0
Definition tr|B8LLD0|B8LLD0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 37
Score (bit) 74.3
E-value 3.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914984|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_B08.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLD0|B8LLD0_PICSI Putative uncharacterized protein OS=Picea...    74   3e-12
tr|A9TZL6|A9TZL6_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|Q851M0|Q851M0_ORYSJ Os03g0837300 protein OS=Oryza sativa subs...    74   4e-12
tr|Q84WV8|Q84WV8_ARATH Putative uncharacterized protein At2g2342...    74   4e-12
tr|Q6XQM4|Q6XQM4_ORYSA Nicotinate phosphoribosyltransferase-like...    74   4e-12
tr|Q10AX9|Q10AX9_ORYSJ Nicotinate phosphoribosyltransferase, put...    74   4e-12
tr|O80459|O80459_ARATH Putative uncharacterized protein At2g2342...    74   4e-12
tr|B8AN97|B8AN97_ORYSI Putative uncharacterized protein OS=Oryza...    74   4e-12
tr|B4FZV8|B4FZV8_MAIZE Putative uncharacterized protein OS=Zea m...    74   4e-12
tr|A7PLB7|A7PLB7_VITVI Chromosome chr7 scaffold_20, whole genome...    74   4e-12
tr|A3API2|A3API2_ORYSJ Putative uncharacterized protein OS=Oryza...    74   4e-12
tr|Q8RWM2|Q8RWM2_ARATH Putative uncharacterized protein At4g3694...    74   6e-12
tr|Q6XQM5|Q6XQM5_MEDTR Nicotinate phosphoribosyltransferase-like...    73   9e-12
tr|Q0JD60|Q0JD60_ORYSJ Os04g0429800 protein OS=Oryza sativa subs...    69   1e-10
tr|Q01LG0|Q01LG0_ORYSA OSIGBa0093L02.7 protein (B0222C05.1 prote...    69   1e-10
tr|B8AU33|B8AU33_ORYSI Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|B6UET1|B6UET1_MAIZE Nicotinate phosphoribosyltransferase-like...    69   1e-10
tr|A4RRA8|A4RRA8_OSTLU Predicted protein OS=Ostreococcus lucimar...    69   2e-10
tr|Q01GC4|Q01GC4_OSTTA Putative nicotinate phosphoribosyltransfe...    64   6e-09
tr|A9UZQ0|A9UZQ0_MONBE Predicted protein OS=Monosiga brevicollis...    61   3e-08
tr|Q29MZ7|Q29MZ7_DROPS GA17636 OS=Drosophila pseudoobscura pseud...    60   5e-08
tr|B4G8F8|B4G8F8_DROPE GL19290 OS=Drosophila persimilis GN=GL192...    60   5e-08
tr|Q95P55|Q95P55_AEDAE Putative nicotinate phosphoribosyltransfe...    59   1e-07
tr|Q7PJC3|Q7PJC3_ANOGA AGAP008516-PA (Nicotinate phosphoribosylt...    59   1e-07
tr|B8RJ58|B8RJ58_CULTA Putative uncharacterized protein (Fragmen...    59   1e-07
tr|B6N6B9|B6N6B9_BRAFL Putative uncharacterized protein OS=Branc...    59   1e-07
tr|B4NYI1|B4NYI1_DROYA GE14765 OS=Drosophila yakuba GN=GE14765 P...    59   1e-07
tr|B4NRW0|B4NRW0_DROSI GD11991 OS=Drosophila simulans GN=GD11991...    59   1e-07
tr|B4MTU7|B4MTU7_DROWI GK23764 OS=Drosophila willistoni GN=GK237...    59   1e-07
tr|B4LU72|B4LU72_DROVI GJ17255 OS=Drosophila virilis GN=GJ17255 ...    59   1e-07

>tr|B8LLD0|B8LLD0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 556

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 520 DHMRELNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 556


>tr|A9TZL6|A9TZL6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_153108 PE=4 SV=1
          Length = 565

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+RSLNPTPYKVSV+ KLYDFIHFLWL+EAPVGEL+
Sbjct: 529 DHMRSLNPTPYKVSVSVKLYDFIHFLWLNEAPVGELQ 565


>tr|Q851M0|Q851M0_ORYSJ Os03g0837300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0042I09.24 PE=2 SV=1
          Length = 560

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 524 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 560


>tr|Q84WV8|Q84WV8_ARATH Putative uncharacterized protein At2g23420
           OS=Arabidopsis thaliana GN=At2g23420 PE=2 SV=1
          Length = 557

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 521 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 557


>tr|Q6XQM4|Q6XQM4_ORYSA Nicotinate phosphoribosyltransferase-like
           protein OS=Oryza sativa PE=2 SV=1
          Length = 535

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 499 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 535


>tr|Q10AX9|Q10AX9_ORYSJ Nicotinate phosphoribosyltransferase,
           putative, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g62110 PE=4 SV=1
          Length = 535

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 499 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 535


>tr|O80459|O80459_ARATH Putative uncharacterized protein At2g23420
           OS=Arabidopsis thaliana GN=At2g23420 PE=4 SV=1
          Length = 574

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 538 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 574


>tr|B8AN97|B8AN97_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14231 PE=4 SV=1
          Length = 560

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 524 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 560


>tr|B4FZV8|B4FZV8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 569

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 533 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 569


>tr|A7PLB7|A7PLB7_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019510001
           PE=4 SV=1
          Length = 557

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 515 DHLRSLNPTPYKVSVTAKLYDFIHFLWLSEAPVGELR 405
           DH+R LNPTPYKVSV+AKLYDFIHFLWL+EAPVGEL+
Sbjct: 521 DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 557