BP914958
Clone id YMU001_000064_H04
Library
Length 475
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTAGAACAGTACTCTCAGAAAAGAGACAAATTTGCAAACAATTTGCAATGCCG
CACTAACAAATAATGTGACAATATACAAGGAACTATACTACATACCAGAGTTGCAGTATC
CTTGAGCCGCAAGGGTGCAAGCGGATGTAGGGTCTTTGCATCACCTTGGGAGCAGTGCCT
GTTCTACATTGAGGAGATGTAGTCTTTGAAGCAAGAGGAATGAACTACAAGTTTAGCTCT
TGATAAATCAACACTCGTTCGGATCCGAGGTTAGCAGATTTGTTGCCGCCTGTACCAGGT
GTAGATGCCCCCACAAGGCTAGATGGGTTACCCGCTGTGGATGCTAGCAGAAGGCTTTCA
GTCGATGAGTTGCATGCACTTGACTCACGTTCCAGACTTCATGGGCTTGATGTACGTCCT
AATGACGATGTCTTCAATAGCTGCTCATTAATCTTTTCGATTGCAGAATGGTGTG
■■Homology search results ■■ -
sp_hit_id A4ZNR4
Definition sp|A4ZNR4|NKD2_DANRE Protein naked cuticle homolog 2 OS=Danio rerio
Align length 52
Score (bit) 31.2
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914958|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_H04.
(475 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4ZNR4|NKD2_DANRE Protein naked cuticle homolog 2 OS=Danio re... 31 2.5
sp|A1SHV9|SYL_NOCSJ Leucyl-tRNA synthetase OS=Nocardioides sp. (... 30 7.2
sp|P54224|DCUP_SYNY3 Uroporphyrinogen decarboxylase OS=Synechocy... 30 7.2

>sp|A4ZNR4|NKD2_DANRE Protein naked cuticle homolog 2 OS=Danio rerio
GN=nkd2 PE=2 SV=1
Length = 409

Score = 31.2 bits (69), Expect = 2.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2

Query: 2 FFLEQYSQKRDKFANNLQCRTNK*CDNIQGTILHTRVAVSLSRKGASGCRVF 157
F ++ +++ +++ NNL+ N+ + Q T+LH + V L + A GC F
Sbjct: 26 FIAKRAAEEGERYGNNLKDYKNEELKDSQPTLLHCPLQVVLPPEKAEGCESF 77


>sp|A1SHV9|SYL_NOCSJ Leucyl-tRNA synthetase OS=Nocardioides sp.
(strain BAA-499 / JS614) GN=leuS PE=3 SV=1
Length = 848

Score = 29.6 bits (65), Expect = 7.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1

Query: 289 PVPGVDAPTRLDGLPAVDASRRLSVDEL 372
P PG DAP ++GLP VD ++R +++ L
Sbjct: 411 PAPGADAPLDINGLP-VDEAKRATIEFL 437


>sp|P54224|DCUP_SYNY3 Uroporphyrinogen decarboxylase
OS=Synechocystis sp. (strain PCC 6803) GN=hemE PE=3 SV=1
Length = 350

Score = 29.6 bits (65), Expect = 7.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1

Query: 274 ADLLPPVPGVDAPTRL--DGLPAVDASRRLS--VDELHALDSRSRL 399
+D+L P+PG+ P + P +D R VD+LHALD S L
Sbjct: 77 SDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQVDQLHALDPESSL 122


tr_hit_id Q2GN61
Definition tr|Q2GN61|Q2GN61_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 49
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914958|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_H04.
(475 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2GN61|Q2GN61_CHAGB Putative uncharacterized protein OS=Chaet... 37 0.64
tr|Q1ZXH1|Q1ZXH1_DICDI Putative uncharacterized protein OS=Dicty... 35 1.4
tr|A4R2P3|A4R2P3_MAGGR Putative uncharacterized protein OS=Magna... 34 4.2
tr|B5YLU6|B5YLU6_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.1

>tr|Q2GN61|Q2GN61_CHAGB Putative uncharacterized protein OS=Chaetomium
globosum GN=CHGG_10593 PE=4 SV=1
Length = 1130

Score = 36.6 bits (83), Expect = 0.64
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1

Query: 289 PVPGVDAPTRLDGLPAVDASRRLSVDELHALDSRSRLHGLDVRPNDDVF 435
P+ G+D R GLPA+D ++R ++D + + RS++ LD RP D +F
Sbjct: 1007 PLLGLDGVRRAAGLPALDDAQRRALDVVEEIAKRSQI-VLDARPGDVLF 1054


>tr|Q1ZXH1|Q1ZXH1_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0233267 PE=4 SV=1
Length = 1646

Score = 35.4 bits (80), Expect = 1.4
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1

Query: 277 DLLPPVPGVDAPTRLDGLPAVDASRRLSVDELHALDSRSRLHGLD 411
DLL V G+D R DGL VD SVD + +DS R+ GLD
Sbjct: 1295 DLLDCVDGIDGLDRADGLDGVD-----SVDRVDRVDSLDRVDGLD 1334


>tr|A4R2P3|A4R2P3_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_02474 PE=4 SV=1
Length = 380

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1

Query: 475 HTILQSKRLMSSY*RHRH*DVHQAHEVWNVSQVHATHRLKA 353
H + +S + ++ H H +VH H++ +V VHA H L+A
Sbjct: 35 HDVHESHSVHEAHEVHEHHEVHDTHDLPDVHDVHAVHELQA 75


>tr|B5YLU6|B5YLU6_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPS_10903 PE=4 SV=1
Length = 454

Score = 33.1 bits (74), Expect = 7.1
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1

Query: 250 NTRSDPRLADLLPPVPGVDAPTRLDGLPAVDASRRLSVDE--LHALDSRSRLHGLDVR 417
+T+S P L+ + PP+ + A R DG+ DA+R L V+E L+ L S GLD R
Sbjct: 180 STQSTPSLS-IPPPMAILTAGWRTDGMTLADAARELMVEEVMLYCLPSSVMDGGLDCR 236