BP914956
Clone id YMU001_000064_H02
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCAACCCATGCTCACGCCGAGCAGATTTGATACATGTACAACTTCATGGGAATAAAATTC
TCCACCCAATCAGCAAAACAGAAACATCTTTCATACTCAATGTTAGTCAGATCATAACAT
CGGTACTTAACCTCTACCATTCCCCTGTATAGGCTCCGATTTTGCCAAATTTGTAGCAAA
TATATCCAAAAGCCTATACTGGGAATGGGCGTGTCAATCCATAATAGAGACAGCTTATGC
CACAATCCTTTCAATATAGTACATTGGACCTGGCCTACCTGTTTGGCCACATTTACACCA
ACATTAGTTCCCCAACGATGGAGGCAGAAGAGGAGGACGTCCATCCTTGAATTGCCCTGA
AGATCTTCTAAATGACCCTGAGAAATGTGGCACCTCCATTTGCCCAAACCTTCTACTGTG
TATGCGACCACCATTCCTAACAATACCCACTAAATTATCCC
■■Homology search results ■■ -
sp_hit_id Q5XIN6
Definition sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Rattus norvegicus
Align length 89
Score (bit) 32.0
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914956|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_H02.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein ... 32 1.3
sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protei... 32 1.3
sp|P38172|YBJ5_YEAST Uncharacterized protein YBL095W OS=Saccharo... 32 1.7
sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protei... 31 2.2
sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis thal... 31 2.9
sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=T... 30 3.8
sp|P34114|PHS2_DICDI Glycogen phosphorylase 2 OS=Dictyostelium d... 30 6.5
sp|Q980L7|ATGT_SULSO 7-cyano-7-deazaguanine tRNA-ribosyltransfer... 29 8.5

>sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1,
mitochondrial OS=Rattus norvegicus GN=Letm1 PE=1 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 1.3
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = -1

Query: 296 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 117
V V K +GQ LK +H LLWIDT I + W L R R + + C
Sbjct: 146 VVVKKSLGQKILDELKHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRI---C 202

Query: 116 YDLTNIEYERCFCFADWVENFIPMKLYMY 30
DL + F ++E +P+ + ++
Sbjct: 203 ADLFRLVPFLVFVVVPFMEFLLPVVVKLF 231


>sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protein
1, mitochondrial OS=Homo sapiens GN=LETM1 PE=1 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 1.3
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = -1

Query: 296 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 117
V V K +GQ LK +H LLWIDT I + W L R R + + C
Sbjct: 147 VVVKKSLGQRVLDELKHYYHGFRLLWIDTKIAARMLWRILNGHSLTRRERRQFLRI---C 203

Query: 116 YDLTNIEYERCFCFADWVENFIPMKLYMY 30
DL + F ++E +P+ + ++
Sbjct: 204 ADLFRLVPFLVFVVVPFMEFLLPVAVKLF 232


>sp|P38172|YBJ5_YEAST Uncharacterized protein YBL095W
OS=Saccharomyces cerevisiae GN=YBL095W PE=1 SV=1
Length = 270

Score = 31.6 bits (70), Expect = 1.7
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1

Query: 401 KWRCHISQGHLED--LQGNSRMDVLLFCL-HRWGTNVGVNVAKQVGQVQCTILKGLWHKL 231
K R I +GHLE L+ +SR + L H WG N +AK+ + C +++ W K
Sbjct: 204 KGRKCIIEGHLEQFPLEVSSRNGTRSWNLPHIWGFNHKQEMAKKFAKANCILVEPTWFKY 263

Query: 230 SLLWID 213
W+D
Sbjct: 264 -FKWLD 268


>sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protein
1, mitochondrial OS=Mus musculus GN=Letm1 PE=2 SV=1
Length = 738

Score = 31.2 bits (69), Expect = 2.2
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -1

Query: 296 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 117
V V K +GQ L+ +H LLWIDT I + W L R R + + C
Sbjct: 146 VVVRKSLGQKVLDELRHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRI---C 202

Query: 116 YDLTNIEYERCFCFADWVENFIPMKLYMY 30
DL + F ++E +P+ + ++
Sbjct: 203 ADLFRLVPFLVFVVVPFMEFLLPVVVKLF 231


>sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis
thaliana GN=ATH4 PE=3 SV=1
Length = 664

Score = 30.8 bits (68), Expect = 2.9
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -1

Query: 386 ISQGHLEDLQGNSRMDVLLFC--LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWID 213
+S +LE LQG+ + F + + T + + +A +G + T + L L +
Sbjct: 206 VSNAYLEFLQGSGTKMLFDFVKEMPKQETRLRLEMASLIGPIFFTWVILLLFPFLLEGLS 265

Query: 212 TPIPSIGFWIYLLQIWQNRSLYRGMVE 132
P WIY+++++ SLYRG+ E
Sbjct: 266 FPRS----WIYIMELYPGFSLYRGLYE 288


>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens
GN=TLR10 PE=1 SV=2
Length = 811

Score = 30.4 bits (67), Expect = 3.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2

Query: 77 NRNIFHTQC*SDHNIGT*--PLPFPCIGSDFAKFVANISKSLYWEW 208
+ N+FH SDH I P+PF CI + + K A + K Y EW
Sbjct: 714 HHNLFHEN--SDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEW 757


>sp|P34114|PHS2_DICDI Glycogen phosphorylase 2 OS=Dictyostelium
discoideum GN=glpD PE=1 SV=2
Length = 993

Score = 29.6 bits (65), Expect = 6.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1

Query: 208 GVSIHNRDSLCHNPFNIVHWTWPTCLATFTPTLVPQRWRQKRRTSILELP*RS 366
GV+ + + + H+ F + + WP T + P+RW Q+ + EL RS
Sbjct: 538 GVAYLHSELVKHDVFPLFYEIWPNKFQNKTNGVTPRRWIQQSNPQLAELITRS 590


>sp|Q980L7|ATGT_SULSO 7-cyano-7-deazaguanine tRNA-ribosyltransferase
OS=Sulfolobus solfataricus GN=tgtA PE=3 SV=1
Length = 503

Score = 29.3 bits (64), Expect = 8.5
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1

Query: 91 SYSMLVRS*HRYLTSTIPLYRLR-------FCQICSKYIQKPILGMGVSIHNRDSLCHNP 249
SY + R +RY+T T +Y+L C ICSKY K +L M + HN
Sbjct: 251 SYIIYARD-NRYITRT-RVYKLEDLEYFPCSCPICSKYTPKDLLEMNEKERTKALAIHNL 308

Query: 250 FNIV 261
+ I+
Sbjct: 309 YTIL 312


tr_hit_id Q187D4
Definition tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase OS=Clostridium difficile (strain 630)
Align length 38
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914956|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_H02.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase... 35 1.9
tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallu... 34 4.1
tr|Q29JX1|Q29JX1_DROPS GA10298 OS=Drosophila pseudoobscura pseud... 34 4.1
tr|B4GJ06|B4GJ06_DROPE GL26197 OS=Drosophila persimilis GN=GL261... 34 4.1
tr|A9V9N1|A9V9N1_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.1
tr|Q12QB1|Q12QB1_SHEDO Putative uncharacterized protein OS=Shewa... 33 7.0
tr|B7SMC2|B7SMC2_9HEMI NADH dehydrogenase subunit 4 OS=Geocoris ... 33 7.0
tr|B8MHC1|B8MHC1_9EURO Cell cycle control protein (Cwf22), putat... 33 7.0
tr|B6QMR1|B6QMR1_PENMA Cell cycle control protein (Cwf22), putat... 33 7.0
tr|B2IUC4|B2IUC4_NOSP7 Serine/threonine protein kinase OS=Nostoc... 33 9.2
tr|A7Q7P3|A7Q7P3_VITVI Chromosome chr18 scaffold_61, whole genom... 33 9.2
tr|A5BYN5|A5BYN5_VITVI Putative uncharacterized protein OS=Vitis... 33 9.2
tr|B4LRF1|B4LRF1_DROVI GJ17557 OS=Drosophila virilis GN=GJ17557 ... 33 9.2
tr|B4KJT9|B4KJT9_DROMO GI17729 OS=Drosophila mojavensis GN=GI177... 33 9.2
tr|Q8SRI2|Q8SRI2_ENCCU GLUCOSAMINE FRUCTOSE-6-PHOSPHATE AMINOTRA... 33 9.2

>tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase
OS=Clostridium difficile (strain 630) GN=cysD PE=3 SV=1
Length = 421

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 6/38 (15%)
Frame = +3

Query: 246 SFQYSTLD-LAYLF-----GHIYTNISSPTMEAEEEDV 341
+F+YS++D LA LF GHIY+ IS+PT++A EE +
Sbjct: 30 TFKYSSIDQLAELFDLKVDGHIYSRISNPTIQAFEEKI 67


>tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallus
gallus GN=RCJMB04_13i11 PE=2 SV=1
Length = 752

Score = 33.9 bits (76), Expect = 4.1
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = -1

Query: 290 VAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRCYD 111
V K +GQ LK +H LLWIDT I + W L +R R + + C D
Sbjct: 146 VKKSIGQRIVDELKHYYHGFRLLWIDTKIAARMLWRILHGNTLSRRERRQFLRI---CAD 202

Query: 110 LTNIEYERCFCFADWVENFIPMKLYMY 30
L + F ++E +P+ L ++
Sbjct: 203 LFRLVPFLVFLVVPFMEFLLPVALKLF 229


>tr|Q29JX1|Q29JX1_DROPS GA10298 OS=Drosophila pseudoobscura
pseudoobscura GN=GA10298 PE=4 SV=1
Length = 327

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -1

Query: 431 VVAYTVEGLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAK--QVGQVQCT 258
VV +V GLG C ++G GN+ + +++ LH G N GVN+ K QVG+ CT
Sbjct: 253 VVDSSVSGLGG--CPYARG----ASGNAATEDVVYMLHGMGLNTGVNLDKLIQVGRYICT 306

Query: 257 IL 252
L
Sbjct: 307 EL 308


>tr|B4GJ06|B4GJ06_DROPE GL26197 OS=Drosophila persimilis GN=GL26197
PE=4 SV=1
Length = 327

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -1

Query: 431 VVAYTVEGLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAK--QVGQVQCT 258
VV +V GLG C ++G GN+ + +++ LH G N GVN+ K QVG+ CT
Sbjct: 253 VVDSSVSGLGG--CPYARG----ASGNAATEDVVYMLHGMGLNTGVNLDKLIQVGRYICT 306

Query: 257 IL 252
L
Sbjct: 307 EL 308


>tr|A9V9N1|A9V9N1_MONBE Predicted protein OS=Monosiga brevicollis
GN=MBCDH15 PE=4 SV=1
Length = 2014

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = +2

Query: 332 GGRPSLNCPEDLLN-----DPEKCGTSICPNLLLCM 424
G P +CP DL + D EKCGT CP CM
Sbjct: 1374 GDAPVCSCPSDLTSRLCDTDYEKCGTDFCPEGSFCM 1409


>tr|Q12QB1|Q12QB1_SHEDO Putative uncharacterized protein
OS=Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013) GN=Sden_1077 PE=3 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = -1

Query: 428 VAYTVE---GLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAKQVGQVQCT 258
V YT+E G+G H+ +E + + +N+G+N++ + ++
Sbjct: 192 VTYTIESVSGVGALLAHLEAEVVERFPAQAGV-----------SNIGINISDETREINTF 240

Query: 257 ILKGLWHKLSLLWIDTPIPSIGFWIYLL 174
+ +GL LS LW P+ I F ++L
Sbjct: 241 VWQGLEPTLSHLWGGMPLVVISFGCFML 268


>tr|B7SMC2|B7SMC2_9HEMI NADH dehydrogenase subunit 4 OS=Geocoris
pallidipennis GN=ND4 PE=4 SV=1
Length = 438

Score = 33.1 bits (74), Expect = 7.0
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -1

Query: 242 WHKLSLLWID-TPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRCYDLTNIEYERCFCFADW 66
W LS +++ T S G+ IYL I Q+ SLY G+ K+ CY N+ F W
Sbjct: 368 WSNLSFVFLGLTSFFSCGYSIYLYSITQHGSLYSGL---KFNCYG--NVREFNLIMF-HW 421

Query: 65 VE-NFIPMKLYMYQI 24
+ NF+ MK ++ +
Sbjct: 422 IPLNFLFMKSEIFSL 436


>tr|B8MHC1|B8MHC1_9EURO Cell cycle control protein (Cwf22), putative
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_021570 PE=4
SV=1
Length = 798

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = -1

Query: 323 LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYR 144
+HR+ TN N+A+ G + G WH LSL+ ++ + I++ ++Q+ + +
Sbjct: 509 IHRYETNRLRNIARFFGHILSNDAIG-WHVLSLIHLNEEETTSSSRIFIKILFQDLAEHM 567

Query: 143 GMVEVKYRCYD 111
GM ++K R D
Sbjct: 568 GMAKLKERLTD 578


>tr|B6QMR1|B6QMR1_PENMA Cell cycle control protein (Cwf22), putative
OS=Penicillium marneffei ATCC 18224 GN=PMAA_051280 PE=4
SV=1
Length = 801

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = -1

Query: 323 LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYR 144
+HR+ TN N+A+ G + G WH LSL+ ++ + I++ ++Q+ + +
Sbjct: 509 IHRYETNRLRNIARFFGHILSNDAIG-WHVLSLIHLNEEETTSSSRIFIKILFQDLAEHM 567

Query: 143 GMVEVKYRCYD 111
GM ++K R D
Sbjct: 568 GMAKLKERLTD 578


>tr|B2IUC4|B2IUC4_NOSP7 Serine/threonine protein kinase OS=Nostoc
punctiforme (strain ATCC 29133 / PCC 73102)
GN=Npun_F0964 PE=4 SV=1
Length = 586

Score = 32.7 bits (73), Expect = 9.2
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Frame = -1

Query: 443 LLGMVVAYTVEGLGKWRCHISQGHLEDLQGNSRM----DVLLFCLHRWGTNVGVNVAKQV 276
+ G ++AY LG+W L L N++ D+L+F WGT G+ +
Sbjct: 397 IAGFILAYHTN-LGRWVVEFISSQLNQLVPNTQTVFGADILVFIAAGWGTAWGLTASGCF 455

Query: 275 GQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEV 129
GQ + ++ L + S GF ++LQ+ + G+V V
Sbjct: 456 GQRRRFLVASLMGMI----------SYGFGWFILQLITPKDSGEGLVAV 494