BP914956 |
Clone id |
YMU001_000064_H02 |
Library |
YMU01 |
Length |
461 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_H02. |
Accession |
BP914956 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL794Contig1 |
Sequence |
CCAACCCATGCTCACGCCGAGCAGATTTGATACATGTACAACTTCATGGGAATAAAATTC TCCACCCAATCAGCAAAACAGAAACATCTTTCATACTCAATGTTAGTCAGATCATAACAT CGGTACTTAACCTCTACCATTCCCCTGTATAGGCTCCGATTTTGCCAAATTTGTAGCAAA TATATCCAAAAGCCTATACTGGGAATGGGCGTGTCAATCCATAATAGAGACAGCTTATGC CACAATCCTTTCAATATAGTACATTGGACCTGGCCTACCTGTTTGGCCACATTTACACCA ACATTAGTTCCCCAACGATGGAGGCAGAAGAGGAGGACGTCCATCCTTGAATTGCCCTGA AGATCTTCTAAATGACCCTGAGAAATGTGGCACCTCCATTTGCCCAAACCTTCTACTGTG TATGCGACCACCATTCCTAACAATACCCACTAAATTATCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XIN6 |
Definition |
sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Rattus norvegicus |
Align length |
89 |
Score (bit) |
32.0 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q187D4 |
Definition |
tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase OS=Clostridium difficile (strain 630) |
Align length |
38 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914956|Adiantum capillus-veneris mRNA, clone: YMU001_000064_H02. (461 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase... 35 1.9 tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallu... 34 4.1 tr|Q29JX1|Q29JX1_DROPS GA10298 OS=Drosophila pseudoobscura pseud... 34 4.1 tr|B4GJ06|B4GJ06_DROPE GL26197 OS=Drosophila persimilis GN=GL261... 34 4.1 tr|A9V9N1|A9V9N1_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.1 tr|Q12QB1|Q12QB1_SHEDO Putative uncharacterized protein OS=Shewa... 33 7.0 tr|B7SMC2|B7SMC2_9HEMI NADH dehydrogenase subunit 4 OS=Geocoris ... 33 7.0 tr|B8MHC1|B8MHC1_9EURO Cell cycle control protein (Cwf22), putat... 33 7.0 tr|B6QMR1|B6QMR1_PENMA Cell cycle control protein (Cwf22), putat... 33 7.0 tr|B2IUC4|B2IUC4_NOSP7 Serine/threonine protein kinase OS=Nostoc... 33 9.2 tr|A7Q7P3|A7Q7P3_VITVI Chromosome chr18 scaffold_61, whole genom... 33 9.2 tr|A5BYN5|A5BYN5_VITVI Putative uncharacterized protein OS=Vitis... 33 9.2 tr|B4LRF1|B4LRF1_DROVI GJ17557 OS=Drosophila virilis GN=GJ17557 ... 33 9.2 tr|B4KJT9|B4KJT9_DROMO GI17729 OS=Drosophila mojavensis GN=GI177... 33 9.2 tr|Q8SRI2|Q8SRI2_ENCCU GLUCOSAMINE FRUCTOSE-6-PHOSPHATE AMINOTRA... 33 9.2
>tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase OS=Clostridium difficile (strain 630) GN=cysD PE=3 SV=1 Length = 421
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 6/38 (15%) Frame = +3
Query: 246 SFQYSTLD-LAYLF-----GHIYTNISSPTMEAEEEDV 341 +F+YS++D LA LF GHIY+ IS+PT++A EE + Sbjct: 30 TFKYSSIDQLAELFDLKVDGHIYSRISNPTIQAFEEKI 67
>tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_13i11 PE=2 SV=1 Length = 752
Score = 33.9 bits (76), Expect = 4.1 Identities = 25/87 (28%), Positives = 38/87 (43%) Frame = -1
Query: 290 VAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRCYD 111 V K +GQ LK +H LLWIDT I + W L +R R + + C D Sbjct: 146 VKKSIGQRIVDELKHYYHGFRLLWIDTKIAARMLWRILHGNTLSRRERRQFLRI---CAD 202
Query: 110 LTNIEYERCFCFADWVENFIPMKLYMY 30 L + F ++E +P+ L ++ Sbjct: 203 LFRLVPFLVFLVVPFMEFLLPVALKLF 229
>tr|Q29JX1|Q29JX1_DROPS GA10298 OS=Drosophila pseudoobscura pseudoobscura GN=GA10298 PE=4 SV=1 Length = 327
Score = 33.9 bits (76), Expect = 4.1 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -1
Query: 431 VVAYTVEGLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAK--QVGQVQCT 258 VV +V GLG C ++G GN+ + +++ LH G N GVN+ K QVG+ CT Sbjct: 253 VVDSSVSGLGG--CPYARG----ASGNAATEDVVYMLHGMGLNTGVNLDKLIQVGRYICT 306
Query: 257 IL 252 L Sbjct: 307 EL 308
>tr|B4GJ06|B4GJ06_DROPE GL26197 OS=Drosophila persimilis GN=GL26197 PE=4 SV=1 Length = 327
Score = 33.9 bits (76), Expect = 4.1 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -1
Query: 431 VVAYTVEGLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAK--QVGQVQCT 258 VV +V GLG C ++G GN+ + +++ LH G N GVN+ K QVG+ CT Sbjct: 253 VVDSSVSGLGG--CPYARG----ASGNAATEDVVYMLHGMGLNTGVNLDKLIQVGRYICT 306
Query: 257 IL 252 L Sbjct: 307 EL 308
>tr|A9V9N1|A9V9N1_MONBE Predicted protein OS=Monosiga brevicollis GN=MBCDH15 PE=4 SV=1 Length = 2014
Score = 33.9 bits (76), Expect = 4.1 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +2
Query: 332 GGRPSLNCPEDLLN-----DPEKCGTSICPNLLLCM 424 G P +CP DL + D EKCGT CP CM Sbjct: 1374 GDAPVCSCPSDLTSRLCDTDYEKCGTDFCPEGSFCM 1409
>tr|Q12QB1|Q12QB1_SHEDO Putative uncharacterized protein OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_1077 PE=3 SV=1 Length = 513
Score = 33.1 bits (74), Expect = 7.0 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = -1
Query: 428 VAYTVE---GLGKWRCHISQGHLEDLQGNSRMDVLLFCLHRWGTNVGVNVAKQVGQVQCT 258 V YT+E G+G H+ +E + + +N+G+N++ + ++ Sbjct: 192 VTYTIESVSGVGALLAHLEAEVVERFPAQAGV-----------SNIGINISDETREINTF 240
Query: 257 ILKGLWHKLSLLWIDTPIPSIGFWIYLL 174 + +GL LS LW P+ I F ++L Sbjct: 241 VWQGLEPTLSHLWGGMPLVVISFGCFML 268
>tr|B7SMC2|B7SMC2_9HEMI NADH dehydrogenase subunit 4 OS=Geocoris pallidipennis GN=ND4 PE=4 SV=1 Length = 438
Score = 33.1 bits (74), Expect = 7.0 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = -1
Query: 242 WHKLSLLWID-TPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRCYDLTNIEYERCFCFADW 66 W LS +++ T S G+ IYL I Q+ SLY G+ K+ CY N+ F W Sbjct: 368 WSNLSFVFLGLTSFFSCGYSIYLYSITQHGSLYSGL---KFNCYG--NVREFNLIMF-HW 421
Query: 65 VE-NFIPMKLYMYQI 24 + NF+ MK ++ + Sbjct: 422 IPLNFLFMKSEIFSL 436
>tr|B8MHC1|B8MHC1_9EURO Cell cycle control protein (Cwf22), putative OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_021570 PE=4 SV=1 Length = 798
Score = 33.1 bits (74), Expect = 7.0 Identities = 20/71 (28%), Positives = 38/71 (53%) Frame = -1
Query: 323 LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYR 144 +HR+ TN N+A+ G + G WH LSL+ ++ + I++ ++Q+ + + Sbjct: 509 IHRYETNRLRNIARFFGHILSNDAIG-WHVLSLIHLNEEETTSSSRIFIKILFQDLAEHM 567
Query: 143 GMVEVKYRCYD 111 GM ++K R D Sbjct: 568 GMAKLKERLTD 578
>tr|B6QMR1|B6QMR1_PENMA Cell cycle control protein (Cwf22), putative OS=Penicillium marneffei ATCC 18224 GN=PMAA_051280 PE=4 SV=1 Length = 801
Score = 33.1 bits (74), Expect = 7.0 Identities = 20/71 (28%), Positives = 38/71 (53%) Frame = -1
Query: 323 LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYR 144 +HR+ TN N+A+ G + G WH LSL+ ++ + I++ ++Q+ + + Sbjct: 509 IHRYETNRLRNIARFFGHILSNDAIG-WHVLSLIHLNEEETTSSSRIFIKILFQDLAEHM 567
Query: 143 GMVEVKYRCYD 111 GM ++K R D Sbjct: 568 GMAKLKERLTD 578
>tr|B2IUC4|B2IUC4_NOSP7 Serine/threonine protein kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F0964 PE=4 SV=1 Length = 586
Score = 32.7 bits (73), Expect = 9.2 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 4/109 (3%) Frame = -1
Query: 443 LLGMVVAYTVEGLGKWRCHISQGHLEDLQGNSRM----DVLLFCLHRWGTNVGVNVAKQV 276 + G ++AY LG+W L L N++ D+L+F WGT G+ + Sbjct: 397 IAGFILAYHTN-LGRWVVEFISSQLNQLVPNTQTVFGADILVFIAAGWGTAWGLTASGCF 455
Query: 275 GQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEV 129 GQ + ++ L + S GF ++LQ+ + G+V V Sbjct: 456 GQRRRFLVASLMGMI----------SYGFGWFILQLITPKDSGEGLVAV 494
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