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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914926
Clone id YMU001_000064_E01
Library
Length 464
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCAAGGGGGAGCGTGAGGGAAGGTCTCCGTGTTGCAAGCAAAAATAAGCCAGATCTTCG
TCCCCAAGCGACTATCAAAGAAGAAAGAGATAGTTGGTTGCCCCCTCCACGACAAAACCT
ATCTCCATAGCCTTTTGCAACCCCTCAACAAGGGATGCAACGCCTATAAAACCCAATGCA
CCACCCGCCGCAAGGTCGATATGGTTCTCTAGAAAACTCTCCAATAGGGGCCCCCACCCA
ACAATAAGTTGTTGCAACTAGCTAGAGATGCACCTATGGTAGGCTTTGTGAGATCCCCAC
ACAGGTGACACATAGATAAATGTTATAAACTTTATGGTTCTTCCTTGACATGTTAAAGTG
CATTTTATGGTCACACTTTCTAAGCTTGCTCACTATATATATTAGTATGTGATTTGCGCA
TTGCTGCAGCCAAAGAAAATCCCCTCTCTCTCTCGCAGGTACTA
■■Homology search results ■■ -
sp_hit_id Q5KJI2
Definition sp|Q5KJI2|DHH1_CRYNE ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans
Align length 59
Score (bit) 34.3
E-value 0.27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914926|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_E01.
         (464 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5KJI2|DHH1_CRYNE ATP-dependent RNA helicase DHH1 OS=Cryptoco...    34   0.27 
sp|Q58Z64|DHH1_CRYNV ATP-dependent RNA helicase VAD1 OS=Cryptoco...    32   1.0  
sp|Q9WTP3|SPDEF_MOUSE SAM pointed domain-containing Ets transcri...    30   3.9  
sp|A2QBZ0|SEC31_ASPNC Protein transport protein sec31 OS=Aspergi...    30   6.7  
sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegic...    30   6.7  
sp|P16733|GM_HCMVA Glycoprotein M OS=Human cytomegalovirus (stra...    30   6.7  
sp|Q64317|DLX1_MOUSE Homeobox protein DLX-1 OS=Mus musculus GN=D...    30   6.7  
sp|P56177|DLX1_HUMAN Homeobox protein DLX-1 OS=Homo sapiens GN=D...    30   6.7  
sp|Q10203|YBX5_SCHPO Uncharacterized protein C17D1.05 OS=Schizos...    29   8.7  
sp|Q5ASA5|SET2_EMENI Histone-lysine N-methyltransferase, H3 lysi...    29   8.7  
sp|Q31GZ1|MURA_THICR UDP-N-acetylglucosamine 1-carboxyvinyltrans...    29   8.7  
sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-depen...    29   8.7  
sp|Q2UCB7|MCA1B_ASPOR Metacaspase-1B OS=Aspergillus oryzae GN=ca...    29   8.7  
sp|P01652|KV5AK_MOUSE Ig kappa chain V-V region J606 OS=Mus musc...    29   8.7  
sp|P01651|KV5AI_MOUSE Ig kappa chain V-V region EPC 109 OS=Mus m...    29   8.7  
sp|P01650|KV5AH_MOUSE Ig kappa chain V-V region UPC 61 OS=Mus mu...    29   8.7  
sp|Q92236|GGPPS_GIBFU Geranylgeranyl pyrophosphate synthetase OS...    29   8.7  

>sp|Q5KJI2|DHH1_CRYNE ATP-dependent RNA helicase DHH1
           OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1
          Length = 625

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 68  ATIKEERDSWLPPPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLENSPIGAPTQQ 244
           A ++EER+S  PPP+    P   A P    Q       HPP   + + + SP  AP QQ
Sbjct: 413 AMVEEERES--PPPK----PAAIAAPPAQQQPQQRQRQHPPVPSHQAAQQSPAAAPVQQ 465


>sp|Q58Z64|DHH1_CRYNV ATP-dependent RNA helicase VAD1
           OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1
          Length = 616

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = +2

Query: 68  ATIKEERDSWLPPPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLENSPIGAPTQQ 244
           A ++EER+S  PPP+    P   A P    Q       HPP   +    +SP  AP QQ
Sbjct: 413 AMVEEERES--PPPK----PAAIAAPPAQQQPQQRQRQHPPVPSHQVAHHSPAAAPIQQ 465


>sp|Q9WTP3|SPDEF_MOUSE SAM pointed domain-containing Ets
           transcription factor OS=Mus musculus GN=Spdef PE=2 SV=1
          Length = 325

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 50  PDLRPQATIKEERDSWLPPPRQNLSP*PFATPQQGM 157
           PD+ P+   ++     + P +Q  SP P ATP+QG+
Sbjct: 20  PDVAPRTGTEKAASGAMGPEKQEWSPSPPATPEQGL 55


>sp|A2QBZ0|SEC31_ASPNC Protein transport protein sec31 OS=Aspergillus
            niger (strain CBS 513.88 / FGSC A1513) GN=sec31 PE=3 SV=1
          Length = 1259

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 83   ERDSWLPPPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLENSPIGAPT 238
            +R   +PPP +  +P P  T     Q     M  PP   Y SL  SP  A T
Sbjct: 984  QRAPSVPPPPKGTAPPPRMTSPPAAQPASTTMPPPPANPYASLPQSPPMAST 1035


>sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegicus
           GN=Mmp9 PE=2 SV=1
          Length = 708

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +2

Query: 44  NKPDLRPQATIKEERDSWLPPPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLENSP 223
           +KPD RP AT   E     PP   + +P P A P  G      P   P  G  G     P
Sbjct: 448 SKPDPRPPATTAAEPQPTAPPTMCSTAP-PMAYPTGGPTVA--PTGAPSPGPTGPPTAGP 504

Query: 224 IGAPTQ 241
             APT+
Sbjct: 505 SEAPTE 510


>sp|P16733|GM_HCMVA Glycoprotein M OS=Human cytomegalovirus (strain
           AD169) GN=GM PE=1 SV=1
          Length = 372

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 345 LTC*SAFYGHTF*ACSLYILVCDLRIAAAKENPLSLSQ 458
           L C + F    F A ++Y LVC ++I+  K+  +SL+Q
Sbjct: 77  LVCYAVFMQLVFLAVTIYYLVCWIKISMRKDKGMSLNQ 114


>sp|Q64317|DLX1_MOUSE Homeobox protein DLX-1 OS=Mus musculus GN=Dlx1
           PE=2 SV=1
          Length = 255

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +2

Query: 104 PPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLE--NSPIGAP 235
           PP Q +SP P +     M  L +  H  P G Y S    + P+G P
Sbjct: 25  PPNQQMSPSPMSHGHYSMHCLHSAGHSQPDGAYSSASSFSRPLGYP 70


>sp|P56177|DLX1_HUMAN Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1
           PE=2 SV=3
          Length = 255

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +2

Query: 104 PPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLE--NSPIGAP 235
           PP Q +SP P +     M  L +  H  P G Y S    + P+G P
Sbjct: 25  PPNQQMSPSPMSHGHYSMHCLHSAGHSQPDGAYSSASSFSRPLGYP 70


>sp|Q10203|YBX5_SCHPO Uncharacterized protein C17D1.05
           OS=Schizosaccharomyces pombe GN=SPBC17D1.05 PE=2 SV=1
          Length = 368

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 49  ARSSSPSDYQRRKR*LVAPSTTKPI--SIAFCNPSTRDATPIKPNAPPAA 192
           A   S S   RR+   +AP  T+P    IAF N ST     ++P  PPAA
Sbjct: 234 ANMESLSIPSRRRPSSIAPIGTRPSRKEIAFSNSSTPTDQTLRPPNPPAA 283


>sp|Q5ASA5|SET2_EMENI Histone-lysine N-methyltransferase, H3
           lysine-36 specific OS=Emericella nidulans GN=set2 PE=3
           SV=1
          Length = 980

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 17  REGLRVASKNKPDLRPQATIKEERDSWLPPP 109
           R+ L V + N PD  P ++ K +R S  PPP
Sbjct: 863 RDELSVGNTNTPDDTPTSSTKRQRSSTPPPP 893
tr_hit_id Q9VPX2
Definition tr|Q9VPX2|Q9VPX2_DROME CG4726 OS=Drosophila melanogaster
Align length 54
Score (bit) 36.2
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914926|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_E01.
         (464 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VPX2|Q9VPX2_DROME CG4726 OS=Drosophila melanogaster GN=CG47...    36   0.83 
tr|B4P311|B4P311_DROYA GE17341 OS=Drosophila yakuba GN=GE17341 P...    36   0.83 
tr|B4ID58|B4ID58_DROSE GM16795 OS=Drosophila sechellia GN=GM1679...    36   0.83 
tr|B3N8C2|B3N8C2_DROER GG24768 OS=Drosophila erecta GN=GG24768 P...    36   0.83 
tr|Q9ZR47|Q9ZR47_DAUCA Neutral invertase OS=Daucus carota PE=2 SV=1    36   1.1  
tr|B4MZJ1|B4MZJ1_DROWI GK24669 OS=Drosophila willistoni GN=GK246...    36   1.1  
tr|B4LU37|B4LU37_DROVI GJ19520 OS=Drosophila virilis GN=GJ19520 ...    36   1.1  
tr|B4KEU3|B4KEU3_DROMO GI17977 OS=Drosophila mojavensis GN=GI179...    36   1.1  
tr|A2DM84|A2DM84_TRIVA Putative uncharacterized protein OS=Trich...    36   1.1  
tr|A6RTI0|A6RTI0_BOTFB Predicted protein OS=Botryotinia fuckelia...    36   1.1  
tr|Q29LH5|Q29LH5_DROPS GA18388 OS=Drosophila pseudoobscura pseud...    35   1.4  
tr|B4JDF0|B4JDF0_DROGR GH11174 OS=Drosophila grimshawi GN=GH1117...    35   1.4  
tr|B4GPY3|B4GPY3_DROPE GL15573 OS=Drosophila persimilis GN=GL155...    35   1.4  
tr|B4Q6N2|B4Q6N2_DROSI GD23071 OS=Drosophila simulans GN=GD23071...    35   1.8  
tr|B3MN94|B3MN94_DROAN GF15164 OS=Drosophila ananassae GN=GF1516...    35   1.8  
tr|A6RAH3|A6RAH3_AJECN Predicted protein OS=Ajellomyces capsulat...    35   1.8  
tr|Q5B319|Q5B319_EMENI Putative uncharacterized protein OS=Emeri...    34   4.1  
tr|A1CPM4|A1CPM4_ASPCL G2/M phase checkpoint control protein Sum...    33   5.4  
tr|Q5KMH1|Q5KMH1_CRYNE Serine/threonine protein phosphatase OS=C...    33   7.0  
tr|Q7RHP8|Q7RHP8_PLAYO Putative uncharacterized protein PY03936 ...    33   9.1  
tr|Q7RZ53|Q7RZ53_NEUCR Putative uncharacterized protein (Annexin...    33   9.1  
tr|O59907|O59907_NEUCR Annexin XIV OS=Neurospora crassa GN=anx14...    33   9.1  
tr|A7F5R6|A7F5R6_SCLS1 Putative uncharacterized protein OS=Scler...    33   9.1  

>tr|Q9VPX2|Q9VPX2_DROME CG4726 OS=Drosophila melanogaster GN=CG4726
           PE=2 SV=1
          Length = 512

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV +G  N
Sbjct: 401 IVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQN 454


>tr|B4P311|B4P311_DROYA GE17341 OS=Drosophila yakuba GN=GE17341 PE=4
           SV=1
          Length = 509

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV +G  N
Sbjct: 398 IVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQN 451


>tr|B4ID58|B4ID58_DROSE GM16795 OS=Drosophila sechellia GN=GM16795
           PE=4 SV=1
          Length = 512

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV +G  N
Sbjct: 401 IVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQN 454


>tr|B3N8C2|B3N8C2_DROER GG24768 OS=Drosophila erecta GN=GG24768 PE=4
           SV=1
          Length = 509

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV +G  N
Sbjct: 398 IVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQN 451


>tr|Q9ZR47|Q9ZR47_DAUCA Neutral invertase OS=Daucus carota PE=2 SV=1
          Length = 675

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 381 RKCDHKMHFNMSRKNHKVYNIYLCVTCVG 295
           RKCDH+M  N+S+K  KVY +   V+C G
Sbjct: 32  RKCDHRMGTNLSKKQFKVYGLRGYVSCRG 60


>tr|B4MZJ1|B4MZJ1_DROWI GK24669 OS=Drosophila willistoni GN=GK24669
           PE=4 SV=1
          Length = 514

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV  G  N
Sbjct: 401 IVAMGAMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTHGNQN 454


>tr|B4LU37|B4LU37_DROVI GJ19520 OS=Drosophila virilis GN=GJ19520
           PE=4 SV=1
          Length = 512

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV  G  N
Sbjct: 399 IVAMGAMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTHGNQN 452


>tr|B4KEU3|B4KEU3_DROMO GI17977 OS=Drosophila mojavensis GN=GI17977
           PE=4 SV=1
          Length = 512

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 245 IVGWGPLLESFLENHIDLA---AGGALGFIGVASLVEGLQKAMEIGFVVEGATN 93
           IV  G +   FL NHID+A   AG  +     A+ + G+   + +GFV  G  N
Sbjct: 399 IVAMGAMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTHGNQN 452


>tr|A2DM84|A2DM84_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_083570 PE=4 SV=1
          Length = 640

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +2

Query: 47  KPDLRPQATIKEERDSWLPPPRQNLSP*PFATPQQGMQRL*NPMHHPPQGRYGSLENSPI 226
           +P  +PQ    + + S++PP +Q   P P+  P +       P   P      + +  P 
Sbjct: 535 QPQQQPQPQYYQPQPSYVPPAQQQQQPTPYGAPPEQPYPYGAPTQQPYPYGAPTQQPYPY 594

Query: 227 GAPTQQ 244
           GAPTQQ
Sbjct: 595 GAPTQQ 600


>tr|A6RTI0|A6RTI0_BOTFB Predicted protein OS=Botryotinia fuckeliana
            (strain B05.10) GN=BC1G_03916 PE=4 SV=1
          Length = 1081

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = +1

Query: 94   LVAPSTTKPISIAFCNPSTRDATPIKPNAPPAARSI 201
            L +P TT P   AF N +T D  PI PN+P + RSI
Sbjct: 1011 LKSPQTTSP---AFLNTATEDTEPIPPNSPKSLRSI 1043