BP914924 |
Clone id |
YMU001_000064_D10 |
Library |
YMU01 |
Length |
436 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_D10. |
Accession |
BP914924 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGATCCTTCTTCACATCCTTTAACTGGTAGATCATCAATGAAAGGCATAGTAACATGTGG GATAAAGTCCCATTAATACTTTATTCATGCTGTTCATCATATGAGCTACATAATTAGTAG CACCCTGTAGCAGAGTGCACATCCTTACCAAACCAAGAGGAGTACGCATTGTAGTAAGAT CCCTTGTAGTAAGATCCCTGCTCTCCAAAGCTAACTATTGATCATATCCAGAAAAAGACC ACCCATGGAGTAAATAGATCTACCTACAAAGGCCTCACAAATTCATCCACAATTGGGTCA CTACCCACATTGCGGATTGTTACCTTATTAACCGGCTGCATATCCTGAATAAACCTTAAC ATACCTTTTTTCTTCGGAACAGTAAACCATCGATTAGAATATGGTGCACATGATGGCTCC AAAATTCCCATTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P03364 |
Definition |
sp|P03364|POL_SMRVH Pol polyprotein OS=Squirrel monkey retrovirus |
Align length |
38 |
Score (bit) |
36.2 |
E-value |
0.06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3GGB9 |
Definition |
tr|B3GGB9|B3GGB9_PODAN Gag-pol polyprotein OS=Podospora anserina |
Align length |
65 |
Score (bit) |
49.3 |
E-value |
4.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914924|Adiantum capillus-veneris mRNA, clone: YMU001_000064_D10. (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3GGB9|B3GGB9_PODAN Gag-pol polyprotein OS=Podospora anserina... 49 4e-14 tr|A6SHV6|A6SHV6_BOTFB Putative uncharacterized protein OS=Botry... 41 2e-08 tr|A6RNZ8|A6RNZ8_BOTFB Putative uncharacterized protein OS=Botry... 41 2e-08 tr|A9RFA7|A9RFA7_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 3e-07 tr|A9RN49|A9RN49_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|A8ND48|A8ND48_COPC7 Putative uncharacterized protein OS=Copri... 52 2e-05 tr|A9RFA8|A9RFA8_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05 tr|Q9C0U1|Q9C0U1_YARLI YALI0A10395p OS=Yarrowia lipolytica GN=ta... 48 2e-04 tr|Q6CHG3|Q6CHG3_YARLI YALI0A08932p OS=Yarrowia lipolytica GN=YA... 48 2e-04 tr|Q6CFJ9|Q6CFJ9_YARLI YALI0B06303p OS=Yarrowia lipolytica GN=YA... 48 2e-04 tr|Q6CFJ4|Q6CFJ4_YARLI YALI0B06446p OS=Yarrowia lipolytica GN=YA... 48 2e-04 tr|Q6C613|Q6C613_YARLI YALI0E13376p OS=Yarrowia lipolytica GN=YA... 48 2e-04 tr|Q6C3G7|Q6C3G7_YARLI YALI0E34980p OS=Yarrowia lipolytica GN=YA... 48 2e-04 tr|A8PDI4|A8PDI4_COPC7 Putative uncharacterized protein OS=Copri... 47 5e-04 tr|A8NIN8|A8NIN8_COPC7 Putative uncharacterized protein OS=Copri... 47 5e-04 tr|A8NJK9|A8NJK9_COPC7 Putative uncharacterized protein OS=Copri... 45 5e-04 tr|A8PI98|A8PI98_COPC7 Putative uncharacterized protein OS=Copri... 47 6e-04 tr|A8NSX6|A8NSX6_COPC7 Putative uncharacterized protein OS=Copri... 47 6e-04 tr|A8NMR3|A8NMR3_COPC7 Putative uncharacterized protein OS=Copri... 47 6e-04 tr|Q75LZ2|Q75LZ2_ORYSJ Putative polyprotein OS=Oryza sativa subs... 46 8e-04 tr|Q65XD2|Q65XD2_ORYSJ Putative polyprotein OS=Oryza sativa subs... 46 8e-04 tr|A8P9J5|A8P9J5_COPC7 Putative uncharacterized protein OS=Copri... 46 8e-04 tr|A8P1P4|A8P1P4_COPC7 Putative uncharacterized protein OS=Copri... 46 8e-04 tr|A8NM19|A8NM19_COPC7 Putative uncharacterized protein OS=Copri... 46 8e-04 tr|A8ND31|A8ND31_COPC7 Putative uncharacterized protein OS=Copri... 46 8e-04 tr|A8NAL5|A8NAL5_COPC7 Putative uncharacterized protein OS=Copri... 46 8e-04 tr|A8PHI0|A8PHI0_COPC7 Putative uncharacterized protein OS=Copri... 46 0.001 tr|A8PD50|A8PD50_COPC7 Putative uncharacterized protein OS=Copri... 46 0.001 tr|A8P8V2|A8P8V2_COPC7 Putative uncharacterized protein OS=Copri... 46 0.001 tr|A8P0M8|A8P0M8_COPC7 Putative uncharacterized protein OS=Copri... 46 0.001
>tr|B3GGB9|B3GGB9_PODAN Gag-pol polyprotein OS=Podospora anserina PE=4 SV=1 Length = 2603
Score = 49.3 bits (116), Expect(3) = 4e-14 Identities = 28/65 (43%), Positives = 33/65 (50%) Frame = -3
Query: 425 ILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTIRNVGSDPIVDEFVRPL*VDLFTP 246 I+E + PY N WF V KK G LR I D Q NKVT R+ P +EF L T Sbjct: 1600 IIEEAHGPYRNNWFLVKKKDGGLRLINDAQRYNKVTQRDAFIPPSTEEFSEDFAGCLITS 1659
Query: 245 WVVFF 231 + FF Sbjct: 1660 LLDFF 1664
Score = 43.5 bits (101), Expect(3) = 4e-14 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -1
Query: 235 FSGYDQ*-LALESXXXXXXXXXXXXTPLGLVRMCTLLQGATNYVAHMMNSMNKVLMGLYP 59 FSGYDQ LAL S P+GL RMCTL QGATN VA ++ +V L P Sbjct: 1664 FSGYDQVKLALTSRDLTTFAT-----PIGLFRMCTLPQGATNSVAQFQRAVTRVFQDLIP 1718
Score = 27.3 bits (59), Expect(3) = 4e-14 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2
Query: 69 DFIPHVTMPFIDDLPVKG 16 D IP V P++DD+ VKG Sbjct: 1715 DLIPQVCRPYLDDIAVKG 1732
>tr|A6SHV6|A6SHV6_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_12337 PE=4 SV=1 Length = 1114
Score = 41.2 bits (95), Expect(2) = 2e-08 Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -1
Query: 235 FSGYDQ*-LALESXXXXXXXXXXXXTPLGLVRMCTLLQGATNYVAHMMNSMNKVLMGLYP 59 FSGYDQ LALES PLGL+R TL QGATN VA + K+L L P Sbjct: 216 FSGYDQIPLALESRDLTAFQT-----PLGLLRYTTLPQGATNSVAQFCRIIMKILGDLTP 270
Query: 58 TCYYAF 41 + +F Sbjct: 271 SVAISF 276
Score = 40.4 bits (93), Expect(2) = 2e-08 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3
Query: 434 QMGILEPSCAPYSNRWFTVPKK-KGMLRFIQDMQPVNKVTIRNVGSDPIVDEF 279 + G+ EP PY N WF V KK G R I + +N+ TIR+ P D F Sbjct: 148 KQGVFEPCDGPYRNPWFLVKKKTPGAYRIINAVVELNRHTIRDANLPPDADAF 200
>tr|A6RNZ8|A6RNZ8_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_02171 PE=4 SV=1 Length = 1114
Score = 41.2 bits (95), Expect(2) = 2e-08 Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -1
Query: 235 FSGYDQ*-LALESXXXXXXXXXXXXTPLGLVRMCTLLQGATNYVAHMMNSMNKVLMGLYP 59 FSGYDQ LALES PLGL+R TL QGATN VA + K+L L P Sbjct: 216 FSGYDQIPLALESRDLTAFQT-----PLGLLRYTTLPQGATNSVAQFCRIIMKILGDLTP 270
Query: 58 TCYYAF 41 + +F Sbjct: 271 SVAISF 276
Score = 40.4 bits (93), Expect(2) = 2e-08 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3
Query: 434 QMGILEPSCAPYSNRWFTVPKK-KGMLRFIQDMQPVNKVTIRNVGSDPIVDEF 279 + G+ EP PY N WF V KK G R I + +N+ TIR+ P D F Sbjct: 148 KQGVFEPCDGPYRNPWFLVKKKTPGAYRIINAVVELNRHTIRDANLPPDADAF 200
>tr|A9RFA7|A9RFA7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113296 PE=4 SV=1 Length = 52
Score = 52.4 bits (124), Expect(2) = 3e-07 Identities = 24/29 (82%), Positives = 25/29 (86%) Frame = -1
Query: 160 PLGLVRMCTLLQGATNYVAHMMNSMNKVL 74 PLGLVRMCTL QGATN + HMMN MNKVL Sbjct: 7 PLGLVRMCTLPQGATNSIMHMMNEMNKVL 35
Score = 25.0 bits (53), Expect(2) = 3e-07 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -2
Query: 69 DFIPHVTMPFIDDLPV 22 DFI TMPF++D+P+ Sbjct: 37 DFILKKTMPFLNDVPI 52
>tr|A9RN49|A9RN49_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_68331 PE=4 SV=1 Length = 401
Score = 55.1 bits (131), Expect = 2e-06 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = -3
Query: 434 QMGILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTI 315 +M ILE S YSN+WF VPKK +LRFIQDMQ VN+V I Sbjct: 362 KMDILESSITSYSNKWFIVPKKSWILRFIQDMQRVNRVII 401
>tr|A8ND48|A8ND48_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_08526 PE=4 SV=1 Length = 1312
Score = 51.6 bits (122), Expect = 2e-05 Identities = 20/51 (39%), Positives = 35/51 (68%) Frame = -3
Query: 431 MGILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTIRNVGSDPIVDEF 279 +G EP + Y ++WF VPKK G +R + ++ P+N+VT+++ G P+V+ F Sbjct: 500 IGTYEPLSSSYRHQWFCVPKKDGGIRIVHNLGPLNQVTVKDAGQMPMVELF 550
>tr|A9RFA8|A9RFA8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113139 PE=4 SV=1 Length = 63
Score = 51.2 bits (121), Expect = 3e-05 Identities = 22/29 (75%), Positives = 25/29 (86%) Frame = -3
Query: 434 QMGILEPSCAPYSNRWFTVPKKKGMLRFI 348 +M ILEPS APYS+RWFT+PKK G LRFI Sbjct: 35 KMKILEPSIAPYSSRWFTIPKKNGSLRFI 63
>tr|Q9C0U1|Q9C0U1_YARLI YALI0A10395p OS=Yarrowia lipolytica GN=ta PE=4 SV=2 Length = 2621
Score = 48.1 bits (113), Expect = 2e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = -3
Query: 428 GILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTIRNVGSDPIVD 285 G +EPS +P+ N WF V KK RFI D Q +NK+T+R+ P D Sbjct: 1614 GQMEPSSSPHRNAWFLVSKKSSGYRFILDCQGLNKITLRDAFHPPNAD 1661
>tr|Q6CHG3|Q6CHG3_YARLI YALI0A08932p OS=Yarrowia lipolytica GN=YALI0A08932g PE=4 SV=1 Length = 2621
Score = 48.1 bits (113), Expect = 2e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = -3
Query: 428 GILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTIRNVGSDPIVD 285 G +EPS +P+ N WF V KK RFI D Q +NK+T+R+ P D Sbjct: 1614 GQMEPSSSPHRNAWFLVSKKSSGYRFILDCQGLNKITLRDAFHPPNAD 1661
>tr|Q6CFJ9|Q6CFJ9_YARLI YALI0B06303p OS=Yarrowia lipolytica GN=YALI0B06303g PE=4 SV=1 Length = 2621
Score = 48.1 bits (113), Expect = 2e-04 Identities = 22/48 (45%), Positives = 29/48 (60%) Frame = -3
Query: 428 GILEPSCAPYSNRWFTVPKKKGMLRFIQDMQPVNKVTIRNVGSDPIVD 285 G +EPS +P+ N WF V KK RFI D Q +NK+T+R+ P D Sbjct: 1614 GQMEPSSSPHRNAWFLVSKKSSGYRFILDCQGLNKITLRDAFHPPNAD 1661
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