BP914837
Clone id YMU001_000063_D10
Library
Length 308
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTCATCAAAGATCGTATACCTGATGTAAAGCTAAAGGTTTTCAGAGTCATTGCCCAAAA
TGGAGAGGATATTCCAAAAATTGTTGAACAGATTTTGGAAGAGGTTGATGCTCGCGATGG
TGAGGGAGCAAAGAAAGGGAATGAAGCTATCAATGAGGAGGTACTACAAGAAGCCAAAGA
GAAAGCTGGAGATGTTGGTGAGTCGGCACAGGAAGTGCAGAGGGAAATACCCATCAGATT
GATTGTGGGTGGAACTCTACAGAGTGCATCAGATGATAAACTTCAAAAGGCTCCAATAAG
GAGGCGGG
■■Homology search results ■■ -
sp_hit_id P16356
Definition sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis elegans
Align length 65
Score (bit) 37.0
E-value 0.031
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914837|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D10.
(308 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1... 37 0.031
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1... 37 0.040
sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizos... 36 0.068
sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1... 36 0.068
sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1... 36 0.068
sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1... 35 0.089
sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1... 35 0.089
sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1... 35 0.089
sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1... 35 0.12
sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1... 35 0.12
sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit OS=Saccharom... 35 0.15
sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1... 34 0.20
sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1... 34 0.20
sp|P11414|RPB1_CRIGR DNA-directed RNA polymerase II subunit RPB1... 34 0.20
sp|Q8SW86|Y2F4_ENCCU UPF0329 protein ECU02_1540 OS=Encephalitozo... 33 0.34
sp|Q8R9D0|MUTS2_THETN MutS2 protein OS=Thermoanaerobacter tengco... 33 0.34
sp|Q8SUH9|Y8K7_ENCCU UPF0329 protein ECU08_2070 OS=Encephalitozo... 33 0.58
sp|P02547|NFL_PIG Neurofilament light polypeptide OS=Sus scrofa ... 33 0.58
sp|P34735|YLU2_PICAN Uncharacterized protein in LEU2 3'region (F... 32 0.99
sp|Q15RL2|RNFD_PSEA6 Electron transport complex protein rnfD OS=... 32 0.99
sp|A1C9L6|NTE1_ASPCL Lysophospholipase nte1 OS=Aspergillus clava... 32 0.99
sp|Q9HDY9|MAM3_SCHPO M cell-type agglutination protein mam3 OS=S... 32 0.99
sp|Q63FR0|ATKB_BACCZ Potassium-transporting ATPase B chain OS=Ba... 31 1.7
sp|Q5B1T9|ATG2_EMENI Autophagy-related protein 2 OS=Emericella n... 31 1.7
sp|P38739|WSC4_YEAST Cell wall integrity and stress response com... 31 2.2
sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom... 31 2.2
sp|O84312|VATE_CHLTR V-type ATP synthase subunit E OS=Chlamydia ... 31 2.2
sp|Q3KM52|VATE_CHLTA V-type ATP synthase subunit E OS=Chlamydia ... 31 2.2
sp|Q8CQU8|RL25_STAES 50S ribosomal protein L25 OS=Staphylococcus... 31 2.2
sp|Q8K9Q9|LEPA_BUCAP GTP-binding protein lepA OS=Buchnera aphidi... 31 2.2

>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2
Length = 1852

Score = 37.0 bits (84), Expect = 0.031
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ T T
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPT 1681

Query: 36 FSFTS 22
+S TS
Sbjct: 1682 YSPTS 1686



Score = 35.8 bits (81), Expect = 0.068
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S +S S S + +SP ++ T T
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPT 1688

Query: 36 FSFTS 22
+S TS
Sbjct: 1689 YSPTS 1693



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S +S S + +SP ++ T T
Sbjct: 1636 TSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT 1695

Query: 36 FSFTS 22
+S TS
Sbjct: 1696 YSPTS 1700



Score = 33.5 bits (75), Expect = 0.34
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKI---CSTIFGISSPFWAMT 46
TS + SPTSP++S +S S S S P ++PS R S +S S + +SP ++ T
Sbjct: 1643 TSPSYSPTSPSYSPSSPSYS---PSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1699

Query: 45 LKTFSFTS 22
T+S TS
Sbjct: 1700 SPTYSPTS 1707



Score = 33.1 bits (74), Expect = 0.44
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ +
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPR 1674

Query: 36 FSFTS 22
+S TS
Sbjct: 1675 YSPTS 1679



Score = 30.8 bits (68), Expect = 2.2
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSP++S S S S S+ +PS S S S S + SSP ++ + ++S +S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672



Score = 28.9 bits (63), Expect = 8.4
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3

Query: 216 TSCADSPTSPAFSLAS--CSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTL 43
TS SPTSP++S S S + S+ +PS S S S S + +SP ++ T
Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644

Query: 42 KTFSFTS 22
++S TS
Sbjct: 1645 PSYSPTS 1651


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
Length = 1853

Score = 36.6 bits (83), Expect = 0.040
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ T T
Sbjct: 1626 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPT 1685

Query: 36 FSFTS 22
+S TS
Sbjct: 1686 YSPTS 1690



Score = 35.4 bits (80), Expect = 0.089
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T T
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPT 1692

Query: 36 FSFTS 22
+S TS
Sbjct: 1693 YSPTS 1697



Score = 34.7 bits (78), Expect = 0.15
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S +S S + +SP ++ T T
Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT 1699

Query: 36 FSFTS 22
+S TS
Sbjct: 1700 YSPTS 1704



Score = 33.1 bits (74), Expect = 0.44
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +P S S + S + +SP ++ T T
Sbjct: 1647 TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPT 1706

Query: 36 FSFTS 22
+S TS
Sbjct: 1707 YSPTS 1711



Score = 31.2 bits (69), Expect = 1.7
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S +S
Sbjct: 1617 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1676



Score = 30.8 bits (68), Expect = 2.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SP SP++S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669



Score = 30.8 bits (68), Expect = 2.2
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SPTSP +S S + S S+ ++PS + S SS S +SP ++ T
Sbjct: 1689 TSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSP----TSPSYSPTSPQ 1744

Query: 36 FSFTS 22
+S TS
Sbjct: 1745 YSPTS 1749


>sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c
OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1
Length = 1236

Score = 35.8 bits (81), Expect = 0.068
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -3

Query: 255 VPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIF 76
+P T + + S+ +S SP+S + S++S STSS +S SPS S+S STI
Sbjct: 569 IPSTFSSVS-SILSSSTSSPSSTSLSISSSSTSSTFSSAS--TSSPSSISSSISSSSTIL 625

Query: 75 GISSPFW-AMTLKTFSFTSGIRSLM 4
+P ++ + + S SG S++
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSIL 650


>sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1
(Fragments) OS=Pichia guilliermondii GN=RPB1 PE=3 SV=2
Length = 1579

Score = 35.8 bits (81), Expect = 0.068
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S ++ +SP ++ T +
Sbjct: 1458 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPS 1517

Query: 36 FSFTS 22
+S TS
Sbjct: 1518 YSPTS 1522



Score = 35.0 bits (79), Expect = 0.12
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1437 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1496

Query: 36 FSFTSGIRS 10
+S TS + S
Sbjct: 1497 YSPTSPLYS 1505



Score = 35.0 bits (79), Expect = 0.12
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1451 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPS 1510

Query: 36 FSFTS 22
+S TS
Sbjct: 1511 YSPTS 1515



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1388 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1447

Query: 36 FSFTS 22
+S TS
Sbjct: 1448 YSPTS 1452



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1395 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1454

Query: 36 FSFTS 22
+S TS
Sbjct: 1455 YSPTS 1459



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1402 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1461

Query: 36 FSFTS 22
+S TS
Sbjct: 1462 YSPTS 1466



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1409 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1468

Query: 36 FSFTS 22
+S TS
Sbjct: 1469 YSPTS 1473



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1416 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1475

Query: 36 FSFTS 22
+S TS
Sbjct: 1476 YSPTS 1480



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1423 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1482

Query: 36 FSFTS 22
+S TS
Sbjct: 1483 YSPTS 1487



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1430 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1489

Query: 36 FSFTS 22
+S TS
Sbjct: 1490 YSPTS 1494



Score = 33.9 bits (76), Expect = 0.26
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1381 TSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1440

Query: 36 FSFTS 22
+S TS
Sbjct: 1441 YSPTS 1445



Score = 33.5 bits (75), Expect = 0.34
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1444 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPL 1503

Query: 36 FSFTS 22
+S TS
Sbjct: 1504 YSPTS 1508



Score = 32.0 bits (71), Expect = 0.99
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S + +SP ++ T +
Sbjct: 1465 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPS 1524

Query: 36 FSFTS 22
+S TS
Sbjct: 1525 YSPTS 1529



Score = 32.0 bits (71), Expect = 0.99
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +P S S S S + +SP ++ T +
Sbjct: 1472 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1531

Query: 36 FSFTS 22
+S TS
Sbjct: 1532 YSPTS 1536



Score = 31.2 bits (69), Expect = 1.7
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S + +PS S S S S + +SP ++ T
Sbjct: 1479 TSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1538

Query: 36 FSFTS 22
+S TS
Sbjct: 1539 YSPTS 1543



Score = 31.2 bits (69), Expect = 1.7
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1486 TSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPA 1545

Query: 36 FSFTS 22
+S TS
Sbjct: 1546 YSPTS 1550



Score = 30.4 bits (67), Expect = 2.9
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1493 TSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQ 1552

Query: 36 FS 31
+S
Sbjct: 1553 YS 1554


>sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1
OS=Dictyostelium discoideum GN=polr2a PE=2 SV=2
Length = 1727

Score = 35.8 bits (81), Expect = 0.068
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSP++S S S S S+ +PS S S S S + +SPF++ T ++S TS
Sbjct: 1554 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTS 1613



Score = 35.0 bits (79), Expect = 0.12
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1556 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPS 1615

Query: 36 FSFTS 22
+S TS
Sbjct: 1616 YSPTS 1620



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1605 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1664

Query: 36 FSFTS 22
+S TS
Sbjct: 1665 YSPTS 1669



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1612 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1671

Query: 36 FSFTS 22
+S TS
Sbjct: 1672 YSPTS 1676



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1619 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1678

Query: 36 FSFTS 22
+S TS
Sbjct: 1679 YSPTS 1683



Score = 33.9 bits (76), Expect = 0.26
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASF----PFFAP-SPSRASTSSKICST--IFGISSPF 58
TS + SPTSP++S S S S S+ PF++P SPS + TS T + +SP
Sbjct: 1570 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1629

Query: 57 WAMTLKTFSFTS 22
++ T ++S TS
Sbjct: 1630 YSPTSPSYSPTS 1641



Score = 33.9 bits (76), Expect = 0.26
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ + T
Sbjct: 1654 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPT 1713

Query: 36 FS 31
F+
Sbjct: 1714 FT 1715



Score = 33.1 bits (74), Expect = 0.44
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1591 TSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1650

Query: 36 FSFTS 22
+S TS
Sbjct: 1651 YSPTS 1655



Score = 33.1 bits (74), Expect = 0.44
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1598 TSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1657

Query: 36 FSFTS 22
+S TS
Sbjct: 1658 YSPTS 1662



Score = 32.7 bits (73), Expect = 0.58
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1626 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1685

Query: 36 FSFTS 22
+S +S
Sbjct: 1686 YSPSS 1690



Score = 32.3 bits (72), Expect = 0.76
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + +
Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1699

Query: 36 FSFTS 22
+S +S
Sbjct: 1700 YSPSS 1704



Score = 32.3 bits (72), Expect = 0.76
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + +
Sbjct: 1647 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPS 1706

Query: 36 FSFTS 22
+S +S
Sbjct: 1707 YSPSS 1711



Score = 32.0 bits (71), Expect = 0.99
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S + +SP ++ T +
Sbjct: 1563 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPS 1622

Query: 36 FSFTS 22
+S TS
Sbjct: 1623 YSPTS 1627



Score = 32.0 bits (71), Expect = 0.99
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1584 TSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1643

Query: 36 FSFTS 22
+S TS
Sbjct: 1644 YSPTS 1648



Score = 31.2 bits (69), Expect = 1.7
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ + +
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS 1692

Query: 36 FSFTS 22
+S +S
Sbjct: 1693 YSPSS 1697


>sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1
OS=Saccharomyces cerevisiae GN=RPB1 PE=1 SV=2
Length = 1733

Score = 35.4 bits (80), Expect = 0.089
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1552 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1611

Query: 36 FSFTS 22
+S TS
Sbjct: 1612 YSPTS 1616



Score = 35.0 bits (79), Expect = 0.12
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SPTSPA+S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1545 TSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1604

Query: 36 FSFTS 22
+S TS
Sbjct: 1605 YSPTS 1609



Score = 34.7 bits (78), Expect = 0.15
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1674

Query: 36 FSFTS 22
+S TS
Sbjct: 1675 YSPTS 1679



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1618

Query: 36 FSFTS 22
+S TS
Sbjct: 1619 YSPTS 1623



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1566 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1625

Query: 36 FSFTS 22
+S TS
Sbjct: 1626 YSPTS 1630



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1573 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1632

Query: 36 FSFTS 22
+S TS
Sbjct: 1633 YSPTS 1637



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639

Query: 36 FSFTS 22
+S TS
Sbjct: 1640 YSPTS 1644



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1587 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1646

Query: 36 FSFTS 22
+S TS
Sbjct: 1647 YSPTS 1651



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1594 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1653

Query: 36 FSFTS 22
+S TS
Sbjct: 1654 YSPTS 1658



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1608 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS 1667

Query: 36 FSFTS 22
+S TS
Sbjct: 1668 YSPTS 1672



Score = 33.9 bits (76), Expect = 0.26
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1601 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1660

Query: 36 FSFTS 22
+S TS
Sbjct: 1661 YSPTS 1665



Score = 33.1 bits (74), Expect = 0.44
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T +
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1681

Query: 36 FSFTS 22
+S TS
Sbjct: 1682 YSPTS 1686



Score = 33.1 bits (74), Expect = 0.44
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +P+ S S S S + +SP ++ T +
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1688

Query: 36 FSFTS 22
+S TS
Sbjct: 1689 YSPTS 1693



Score = 32.7 bits (73), Expect = 0.58
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S ++ +PS S S S S + +SP ++ T
Sbjct: 1636 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN 1695

Query: 36 FSFTS 22
+S TS
Sbjct: 1696 YSPTS 1700



Score = 32.7 bits (73), Expect = 0.58
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S + S S+ +PS S S S S + +SP ++ T +
Sbjct: 1643 TSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS 1702

Query: 36 FSFTS 22
+S TS
Sbjct: 1703 YSPTS 1707



Score = 32.0 bits (71), Expect = 0.99
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSPA+S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1650 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

Query: 36 FS 31
+S
Sbjct: 1710 YS 1711



Score = 31.6 bits (70), Expect = 1.3
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = -3

Query: 249 PTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGI 70
PT G+S S SPTSP +S S + S S+ +PS S S S S +
Sbjct: 1530 PTSPGFGVS---SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1586

Query: 69 SSPFWAMTLKTFSFTS 22
+SP ++ T ++S TS
Sbjct: 1587 TSPSYSPTSPSYSPTS 1602



Score = 29.6 bits (65), Expect = 4.9
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3

Query: 204 DSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFT 25
++PTSP F ++S S ++ +P+ S S S S + +SP ++ T ++S T
Sbjct: 1528 EAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 24 S 22
S
Sbjct: 1588 S 1588


>sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1
OS=Ashbya gossypii GN=RPB1 PE=3 SV=1
Length = 1745

Score = 35.4 bits (80), Expect = 0.089
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1548 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1607

Query: 36 FSFTS 22
+S TS
Sbjct: 1608 YSPTS 1612



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1555 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1614

Query: 36 FSFTS 22
+S TS
Sbjct: 1615 YSPTS 1619



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1562 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621

Query: 36 FSFTS 22
+S TS
Sbjct: 1622 YSPTS 1626



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1569 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1628

Query: 36 FSFTS 22
+S TS
Sbjct: 1629 YSPTS 1633



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1576 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635

Query: 36 FSFTS 22
+S TS
Sbjct: 1636 YSPTS 1640



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1583 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1642

Query: 36 FSFTS 22
+S TS
Sbjct: 1643 YSPTS 1647



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1590 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1649

Query: 36 FSFTS 22
+S TS
Sbjct: 1650 YSPTS 1654



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1597 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1656

Query: 36 FSFTS 22
+S TS
Sbjct: 1657 YSPTS 1661



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663

Query: 36 FSFTS 22
+S TS
Sbjct: 1664 YSPTS 1668



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670

Query: 36 FSFTS 22
+S TS
Sbjct: 1671 YSPTS 1675



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677

Query: 36 FSFTS 22
+S TS
Sbjct: 1678 YSPTS 1682



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1625 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684

Query: 36 FSFTS 22
+S TS
Sbjct: 1685 YSPTS 1689



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1632 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691

Query: 36 FSFTS 22
+S TS
Sbjct: 1692 YSPTS 1696



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698

Query: 36 FSFTS 22
+S TS
Sbjct: 1699 YSPTS 1703



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1646 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1705

Query: 36 FSFTS 22
+S TS
Sbjct: 1706 YSPTS 1710



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712

Query: 36 FSFTS 22
+S TS
Sbjct: 1713 YSPTS 1717



Score = 33.9 bits (76), Expect = 0.26
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSPA+S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1546 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605



Score = 31.6 bits (70), Expect = 1.3
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1719

Query: 36 FS 31
+S
Sbjct: 1720 YS 1721



Score = 29.6 bits (65), Expect = 4.9
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ +
Sbjct: 1667 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSPS 1726

Query: 36 FS 31
+S
Sbjct: 1727 YS 1728


>sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1
OS=Arabidopsis thaliana GN=RPB205 PE=1 SV=2
Length = 1840

Score = 35.4 bits (80), Expect = 0.089
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSPA+S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1646 TSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPG 1705

Query: 36 FSFTS 22
+S TS
Sbjct: 1706 YSPTS 1710



Score = 35.4 bits (80), Expect = 0.089
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1653 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS 1712

Query: 36 FSFTS 22
+S TS
Sbjct: 1713 YSPTS 1717



Score = 35.0 bits (79), Expect = 0.12
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1590 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA 1649

Query: 36 FSFTS 22
+S TS
Sbjct: 1650 YSPTS 1654



Score = 35.0 bits (79), Expect = 0.12
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A SPTSPA+S S + S S+ +PS S S S S + +SP ++ T
Sbjct: 1639 TSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1698

Query: 36 FSFTS 22
+S TS
Sbjct: 1699 YSPTS 1703



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1597 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA 1656

Query: 36 FSFTS 22
+S TS
Sbjct: 1657 YSPTS 1661



Score = 33.5 bits (75), Expect = 0.34
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSPA+S S S S S+ +PS S S S S + +SP ++ T +S TS
Sbjct: 1588 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1647



Score = 33.5 bits (75), Expect = 0.34
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T +
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS 1663

Query: 36 FSFTS 22
+S TS
Sbjct: 1664 YSPTS 1668



Score = 33.1 bits (74), Expect = 0.44
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSPA+S S + S ++ +PS S S S S + +SP ++ T +
Sbjct: 1632 TSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691

Query: 36 FSFTS 22
+S TS
Sbjct: 1692 YSPTS 1696



Score = 32.3 bits (72), Expect = 0.76
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +P+ S S + S + +SP ++ T +
Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPS 1670

Query: 36 FSFTS 22
+S TS
Sbjct: 1671 YSPTS 1675



Score = 31.2 bits (69), Expect = 1.7
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SPTSP +S +S S ++ +PS S S S S + +SP ++ T +
Sbjct: 1569 TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1628

Query: 36 FSFTS 22
+S TS
Sbjct: 1629 YSPTS 1633



Score = 30.8 bits (68), Expect = 2.2
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS SP+SP +S S + S S+ +PS S S S S + +SP ++ T +
Sbjct: 1576 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635

Query: 36 FSFTS 22
+S TS
Sbjct: 1636 YSPTS 1640



Score = 30.8 bits (68), Expect = 2.2
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S ++ +P+ S S + S + +SP ++ T +
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1677

Query: 36 FSFTS 22
+S TS
Sbjct: 1678 YSPTS 1682



Score = 30.8 bits (68), Expect = 2.2
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S + S ++ +P+ S S S S + +SP ++ T +
Sbjct: 1625 TSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684

Query: 36 FSFTS 22
+S TS
Sbjct: 1685 YSPTS 1689



Score = 30.8 bits (68), Expect = 2.2
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T +
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS 1719

Query: 36 FSFTS 22
+ TS
Sbjct: 1720 YGPTS 1724


>sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1
OS=Schizosaccharomyces pombe GN=rpb1 PE=1 SV=1
Length = 1752

Score = 35.0 bits (79), Expect = 0.12
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1640

Query: 36 FSFTS 22
+S TS
Sbjct: 1641 YSPTS 1645



Score = 35.0 bits (79), Expect = 0.12
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S+ S+ +PS S S S S + +SP ++ T +
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1647

Query: 36 FSFTS 22
+S TS
Sbjct: 1648 YSPTS 1652



Score = 35.0 bits (79), Expect = 0.12
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1595 TSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654

Query: 36 FSFTS 22
+S TS
Sbjct: 1655 YSPTS 1659



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1609 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1668

Query: 36 FSFTS 22
+S TS
Sbjct: 1669 YSPTS 1673



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1675

Query: 36 FSFTS 22
+S TS
Sbjct: 1676 YSPTS 1680



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1623 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1682

Query: 36 FSFTS 22
+S TS
Sbjct: 1683 YSPTS 1687



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1630 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1689

Query: 36 FSFTS 22
+S TS
Sbjct: 1690 YSPTS 1694



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1637 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1696

Query: 36 FSFTS 22
+S TS
Sbjct: 1697 YSPTS 1701



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1644 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1703

Query: 36 FSFTS 22
+S TS
Sbjct: 1704 YSPTS 1708



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1710

Query: 36 FSFTS 22
+S TS
Sbjct: 1711 YSPTS 1715



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1658 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1717

Query: 36 FSFTS 22
+S TS
Sbjct: 1718 YSPTS 1722



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1724

Query: 36 FSFTS 22
+S TS
Sbjct: 1725 YSPTS 1729



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1672 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1731

Query: 36 FSFTS 22
+S TS
Sbjct: 1732 YSPTS 1736



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1738

Query: 36 FSFTS 22
+S TS
Sbjct: 1739 YSPTS 1743



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1686 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1745

Query: 36 FSFTS 22
+S TS
Sbjct: 1746 YSPTS 1750



Score = 33.1 bits (74), Expect = 0.44
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1579 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638



Score = 32.7 bits (73), Expect = 0.58
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS A P+SP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPS 1626

Query: 36 FSFTS 22
+S TS
Sbjct: 1627 YSPTS 1631



Score = 31.2 bits (69), Expect = 1.7
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + S TSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1602 TSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1661

Query: 36 FSFTS 22
+S TS
Sbjct: 1662 YSPTS 1666



Score = 30.0 bits (66), Expect = 3.8
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -3

Query: 249 PTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGI 70
P L S S TSPA+ +S S S S+ +PS S S S S +
Sbjct: 1549 PGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSA 1608

Query: 69 SSPFWAMTLKTFSFTS 22
+SP ++ T ++S TS
Sbjct: 1609 TSPSYSPTSPSYSPTS 1624



Score = 28.9 bits (63), Expect = 8.4
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSP 61
TS + SPTSP++S S S S S+ +PS S S S S + +SP
Sbjct: 1700 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751


>sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1
OS=Encephalitozoon cuniculi GN=RPB1 PE=3 SV=1
Length = 1599

Score = 35.0 bits (79), Expect = 0.12
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP +++++ +
Sbjct: 1518 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMSS 1577

Query: 36 FS 31
FS
Sbjct: 1578 FS 1579



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1469 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1528

Query: 36 FSFTS 22
+S TS
Sbjct: 1529 YSPTS 1533



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1476 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1535

Query: 36 FSFTS 22
+S TS
Sbjct: 1536 YSPTS 1540



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1483 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1542

Query: 36 FSFTS 22
+S TS
Sbjct: 1543 YSPTS 1547



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1490 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1549

Query: 36 FSFTS 22
+S TS
Sbjct: 1550 YSPTS 1554



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1497 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1556

Query: 36 FSFTS 22
+S TS
Sbjct: 1557 YSPTS 1561



Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1504 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1563

Query: 36 FSFTS 22
+S TS
Sbjct: 1564 YSPTS 1568



Score = 32.7 bits (73), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -3

Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22
SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1526



Score = 32.3 bits (72), Expect = 0.76
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -3

Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1511 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1570

Query: 36 FS 31
+S
Sbjct: 1571 YS 1572


tr_hit_id A9SDF6
Definition tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 116
Score (bit) 75.1
E-value 2.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914837|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D10.
(308 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella paten... 75 2e-12
tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella paten... 65 1e-09
tr|A9S7T0|A9S7T0_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 4e-04
tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis... 43 0.007
tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g2751... 43 0.007
tr|Q8IIG7|Q8IIG7_PLAF7 Putative uncharacterized protein OS=Plasm... 42 0.015
tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genom... 41 0.034
tr|A7RVA8|A7RVA8_NEMVE Predicted protein OS=Nematostella vectens... 38 0.29
tr|B6KJK2|B6KJK2_TOXGO Chromatin assembly factor 1 subunit, puta... 37 0.38
tr|A7EZ35|A7EZ35_SCLS1 Putative uncharacterized protein OS=Scler... 37 0.50
tr|Q99368|Q99368_SOYBN DNA-directed RNA polymerase (Fragment) OS... 37 0.65
tr|Q4QZ03|Q4QZ03_SOLTU DNA-directed RNA polymerase (Fragment) OS... 37 0.65
tr|A3BPR9|A3BPR9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati... 37 0.65
tr|B6KGX2|B6KGX2_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.65
tr|B3LH31|B3LH31_YEAS1 RNA polymerase II core subunit OS=Sacchar... 37 0.65
tr|B0E277|B0E277_LACBS Predicted protein OS=Laccaria bicolor (st... 37 0.65
tr|A6ZSB8|A6ZSB8_YEAS7 A-agglutinin anchorage subunit OS=Sacchar... 37 0.65
tr|Q0D054|Q0D054_ASPTN DNA-directed RNA polymerase OS=Aspergillu... 36 0.85
tr|A0P3B5|A0P3B5_9RHOB ATP-dependent metalloprotease FtsH OS=Lab... 36 1.1
tr|Q99367|Q99367_SOYBN DNA-directed RNA polymerase (Fragment) OS... 36 1.1
tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis vini... 36 1.1
tr|B6MSZ4|B6MSZ4_BRAFL Putative uncharacterized protein OS=Branc... 36 1.1
tr|B6KTW2|B6KTW2_TOXGO Putative uncharacterized protein OS=Toxop... 36 1.1
tr|Q9KD34|Q9KD34_BACHD ATP-dependent RNA helicase OS=Bacillus ha... 35 1.4
tr|Q99366|Q99366_SOYBN DNA-directed RNA polymerase (Fragment) OS... 35 1.4
tr|A9U396|A9U396_PHYPA DNA-directed RNA polymerase OS=Physcomitr... 35 1.4
tr|B6K8V0|B6K8V0_TOXGO tRNA delta(2)-isopentenylpyrophosphate tr... 35 1.4
tr|Q9HGZ5|Q9HGZ5_ASPOR DNA-directed RNA polymerase OS=Aspergillu... 35 1.4
tr|Q6FQS9|Q6FQS9_CANGA DNA-directed RNA polymerase OS=Candida gl... 35 1.4
tr|Q5BF71|Q5BF71_EMENI DNA-directed RNA polymerase OS=Emericella... 35 1.4

>tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_183711 PE=4 SV=1
Length = 638

Score = 75.1 bits (183), Expect = 2e-12
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 16/116 (13%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRVIAQNGED--IPKIVEQILEEVDA-----RDGEGAKKGNEAINEE 160
F+KDRIPDVKLKVF+VIA G D +PKIVEQ++E+ D+ +D A N IN
Sbjct: 273 FLKDRIPDVKLKVFKVIAPEGADAELPKIVEQLMEQEDSSSSKQQDLSEASTSNTNINSA 332

Query: 161 VLQ---------EAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIR 301
+ + K G +GE ++E+ IRL+VGG LQ+ D + K P+R
Sbjct: 333 TEKKGLGSKFPLDGKIPVGGIGED----EKEMSIRLVVGGVLQNNIDSEPSKLPVR 384


>tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_121059 PE=4 SV=1
Length = 588

Score = 65.5 bits (158), Expect = 1e-09
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINEEVLQEAKE 181
F+KDR+PDVKLKVF+ DIPKIVEQ++ + D+ + + N E
Sbjct: 230 FLKDRMPDVKLKVFK-------DIPKIVEQLMGQEDSISSKQQDLPEASTNNTNSNNTSE 282

Query: 182 KAG-----------DVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIR 301
K G VG EV++E PIRL+VGG LQ+ D + K P+R
Sbjct: 283 KKGLSSKFPLDGKIPVG-GIGEVEKETPIRLVVGGILQNNVDSEPPKLPVR 332


>tr|A9S7T0|A9S7T0_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_182118 PE=4 SV=1
Length = 348

Score = 47.4 bits (111), Expect = 4e-04
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRVIAQNGE---DIPKIVEQILEEVD---ARDGEGAKKGNEAINEEV 163
F++DR+PDVK+KVF+VI NG+ D+P IVEQ++E+ + RD E A GN +
Sbjct: 239 FLEDRMPDVKMKVFQVIV-NGKIEADLPSIVEQLMEDAEDELLRDEELAGAGNSNSGLQF 297

Query: 164 LQ 169
+Q
Sbjct: 298 IQ 299


>tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis
thaliana GN=T17H3.1 PE=4 SV=1
Length = 568

Score = 43.1 bits (100), Expect = 0.007
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARD---GEGAKKGNEAINEEVLQE 172
F+KD+IP +KLKV VI IP+ E+I+ DA + GEG ++ N + +EE ++E
Sbjct: 302 FLKDKIPGLKLKVMDVI-----KIPE--EEIVGSDDATEELVGEGTEETNSSDDEEEVEE 354

Query: 173 AKEKAGDVGES--AQEVQREIPIRLIVGGTLQSASDDKLQKAPIR 301
+ + + S + + + +L++GG L + D + +R
Sbjct: 355 EENDSIEAISSMDSADYGKHSNTKLVIGGVLHNIEDSSIDDEIVR 399


>tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g27510
OS=Arabidopsis thaliana GN=At1g27510 PE=2 SV=1
Length = 651

Score = 43.1 bits (100), Expect = 0.007
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARD---GEGAKKGNEAINEEVLQE 172
F+KD+IP +KLKV VI IP+ E+I+ DA + GEG ++ N + +EE ++E
Sbjct: 302 FLKDKIPGLKLKVMDVI-----KIPE--EEIVGSDDATEELVGEGTEETNSSDDEEEVEE 354

Query: 173 AKEKAGDVGES--AQEVQREIPIRLIVGGTLQSASDDKLQKAPIR 301
+ + + S + + + +L++GG L + D + +R
Sbjct: 355 EENDSIEAISSMDSADYGKHSNTKLVIGGVLHNIEDSSIDDEIVR 399


>tr|Q8IIG7|Q8IIG7_PLAF7 Putative uncharacterized protein
OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0207 PE=4
SV=1
Length = 964

Score = 42.0 bits (97), Expect = 0.015
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +2

Query: 5 IKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINEEVLQEAKEK 184
+K+ I +VK ++ V + E+I ++ E+I EE+ E K+ E I EEV +E KE
Sbjct: 551 VKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEIK----EEIKEVKEEIKEEVKEEIKEV 606

Query: 185 AGDVGESAQEVQREI 229
++ E +E++ E+
Sbjct: 607 KEEIKEVKEEIKEEV 621



Score = 35.4 bits (80), Expect = 1.4
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2

Query: 5 IKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINEEVLQ---EA 175
I++R ++K + + + ++I + ++++ EE+ E K+ E I EE+ + E
Sbjct: 485 IQERKEEIKEEFKEEVKEEIKEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEV 544

Query: 176 KEKAGDVGESAQEVQREI 229
KE+ +V E +EV+ EI
Sbjct: 545 KEEIKEVKEEIKEVKEEI 562


>tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016102001
PE=4 SV=1
Length = 656

Score = 40.8 bits (94), Expect = 0.034
Identities = 25/106 (23%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Frame = +2

Query: 2 FIKDRIPDVKLKVFRV-----IAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINEEVL 166
F+KD+IP++K+KV ++ + ++G+ V+Q ++E D + +EA + + +
Sbjct: 304 FLKDKIPELKVKVMKINVPDEVIEDGDS----VKQFMQEDDEKTQSSEDSEDEADDLDKI 359

Query: 167 QEAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIRR 304
Q + G +A++ Q + ++L +GG L + D + +R+
Sbjct: 360 QPDEVALGGGSNTAEDGQ-NLDMKLFIGGVLHNKEDTSSKDDYVRQ 404


>tr|A7RVA8|A7RVA8_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g202671 PE=4 SV=1
Length = 560

Score = 37.7 bits (86), Expect = 0.29
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3

Query: 267 ALCRVPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPF--FAPSPSRASTSSK 94
A +P + + IS S + +PT+P+F+ + + +S+ AS P P+PS++ S
Sbjct: 321 AATTIPASATVSSISTTASASTAPTNPSFATTTVTATSICASTPVTQITPAPSKSLASVS 380

Query: 93 ICSTI 79
ST+
Sbjct: 381 TLSTV 385


>tr|B6KJK2|B6KJK2_TOXGO Chromatin assembly factor 1 subunit,
putative OS=Toxoplasma gondii ME49 GN=TGME49_031240 PE=4
SV=1
Length = 787

Score = 37.4 bits (85), Expect = 0.38
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = -3

Query: 282 SLSSDALCRVPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRAST 103
+L+S + P ++ +L +SC+ SP+S + +S S+SS +S P +PS + AS+
Sbjct: 360 TLNSTSETSPPSALSSPPSALASSCSSSPSSSSSPSSSSSSSSSCSSSPHPSPSSASASS 419

Query: 102 SSKICSTIFGISS 64
+S S+ G+SS
Sbjct: 420 ASSSASS-SGVSS 431


>tr|A7EZ35|A7EZ35_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_10601 PE=4 SV=1
Length = 234

Score = 37.0 bits (84), Expect = 0.50
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2

Query: 68 DIPKIVEQILEEVDARDGEG-AKKGNEAINEEVLQEAKEKAGDVGESAQEVQ 220
D+ I EQIL+EVD +GE G++ + +L+E K+ AG+ GE ++V+
Sbjct: 160 DLSYIREQILDEVDEDEGEAVGSAGSKKDVQAMLEEGKDGAGEKGEKKRKVK 211