BP914820
Clone id YMU001_000063_C02
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTAGCCAAATGGTACTTGAAAGCGCTTTGGAAAGCTGCCATGCGCAAATGTGAAGCA
CCACATACAATCATACAAATCTGGGCATTAGCCTGCCTGTGACAAGCTTTATTTTACAGT
GTGTGCCCGGCAGGCGGGCTAAGCAAAGAACTAACATATGAAACCATTAAAAACTCACCC
TTTCATCCAAAAGGATGTTCTCAACCGGGTGTAATTACAAGAGGCTTATAACCAGGAAAA
TTTACAAACATAAGCTGGCAATTAACTCCCTGCAAATTTCCATAACCCTTGGTGTGAGAG
AACCTGCTGAATCTCTCAAATCCAAGACGTAACCGTAAATCTGAACTTTCCAGTAGTGAG
TGTTGCCACAACACACAATGGCTGCATCAATCTTTCTCCTTTTGAGCTTTCCATGCAGTA
CCTCTTCTGATAACACAAATAGGTACACTTTCAAGAAGGGACCATCAG
■■Homology search results ■■ -
sp_hit_id Q8T158
Definition sp|Q8T158|FAM91_DICDI Protein FAM91 homolog OS=Dictyostelium discoideum
Align length 63
Score (bit) 30.8
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914820|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_C02.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8T158|FAM91_DICDI Protein FAM91 homolog OS=Dictyostelium dis... 31 3.1
sp|P53306|GPI1_YEAST Phosphatidylinositol N-acetylglucosaminyltr... 30 4.0
sp|O13817|SEC7C_SCHPO Protein transport protein sec73 OS=Schizos... 29 8.9
sp|Q8RAZ3|CHEB_THETN Chemotaxis response regulator protein-gluta... 29 8.9

>sp|Q8T158|FAM91_DICDI Protein FAM91 homolog OS=Dictyostelium
discoideum GN=fam91 PE=3 SV=2
Length = 930

Score = 30.8 bits (68), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -3

Query: 451 KVYLFVLSEEVLHGKLKRRKIDAAIVCCGNTHYWKVQIYGYVLDLRDSAGSLTPRVMEIC 272
K +LF ++V+ G L R ++ N YW + YGY + GSL +E+
Sbjct: 148 KGFLFKKKKDVIRGLLPTRSLEK------NIEYWWILRYGYPNQDEERQGSLPASELEVL 201

Query: 271 REL 263
+L
Sbjct: 202 DDL 204


>sp|P53306|GPI1_YEAST Phosphatidylinositol
N-acetylglucosaminyltransferase subunit GPI1
OS=Saccharomyces cerevisiae GN=GPI1 PE=1 SV=1
Length = 609

Score = 30.4 bits (67), Expect = 4.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2

Query: 230 NQENLQT*AGN*LPANFHNPWCERTC*ISQIQDVTVNLNFPVVSVATTHNGCINLSPFEL 409
+QENL+ N + A WC TC + + L F + S+A+ + +N S F+L
Sbjct: 159 SQENLRGTMLNSVAA-----WCSSTCIYKMVAKIGFYLTFVICSIASLVSSLLNYSHFQL 213


>sp|O13817|SEC7C_SCHPO Protein transport protein sec73
OS=Schizosaccharomyces pombe GN=sec73 PE=2 SV=2
Length = 1082

Score = 29.3 bits (64), Expect = 8.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2

Query: 314 RFSRFSHTKG-YGNLQGVNCQLMFVNFPGYKPLVITP 207
R+ F+ T + LQG++ + M FP PLV TP
Sbjct: 671 RYKNFTTTSSSFDTLQGIDTEAMEYEFPKIPPLVFTP 707


>sp|Q8RAZ3|CHEB_THETN Chemotaxis response regulator
protein-glutamate methylesterase OS=Thermoanaerobacter
tengcongensis GN=cheB PE=3 SV=1
Length = 367

Score = 29.3 bits (64), Expect = 8.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Frame = +3

Query: 180 LSSKRMFSTGCNYKRL-------ITRKIYKHKLAINSLQISITLGV 296
LS+K + S+ N+K+L +TRK+Y++K I+ +I + +GV
Sbjct: 133 LSNKELLSSSRNFKKLLKRRNQEVTRKVYENK--ISKKEIVVVIGV 176


tr_hit_id Q118Y7
Definition tr|Q118Y7|Q118Y7_TRIEI TPR repeat OS=Trichodesmium erythraeum (strain IMS101)
Align length 31
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914820|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_C02.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q118Y7|Q118Y7_TRIEI TPR repeat OS=Trichodesmium erythraeum (s... 34 4.2
tr|B5RTA3|B5RTA3_DEBHA DEHA2C12254p OS=Debaryomyces hansenii GN=... 33 7.1

>tr|Q118Y7|Q118Y7_TRIEI TPR repeat OS=Trichodesmium erythraeum (strain
IMS101) GN=Tery_0481 PE=4 SV=1
Length = 3145

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2

Query: 299 SHTKGYGNLQGVNCQLMFVNFPGYKPLVITP 207
+H G+G + G+N L + PGYKPL++TP
Sbjct: 2766 NHHTGWG-IYGINLTLQLLQTPGYKPLLLTP 2795


>tr|B5RTA3|B5RTA3_DEBHA DEHA2C12254p OS=Debaryomyces hansenii
GN=DEHA2C12254g PE=4 SV=1
Length = 782

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1

Query: 67 TIIQIWALACL*QALFYSVCPAGGLSKELTYETIKNSPFHPKGCSQPGVITRGL*PGKFT 246
+++ IW+L CL L S P G ++ + IKN+ +H + V G +F
Sbjct: 343 SLVDIWSLGCLVYVLLTSHLPFNGKTQAQMFTKIKNAEYHESPLNTYNVSADG---KEFL 399

Query: 247 NISWQLTP 270
N Q+ P
Sbjct: 400 NCCLQVNP 407