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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914779
Clone id YMU001_000062_G08
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCAGAGTCTGTGAAACAGCCTGTTTACCAAGAAACTGCAGTTTTTTTACGAACAGATGAA
GCAAAAATTGACATTTGCAAGAAAGGGATTGTTGATGAGGGAGGAGTAGCAATAAATGCA
GAGGATTTGTTATATAAAGAAGTTAACAACACTGTTGGGCAACGTGAACATGAACAGATA
CTTCATGTCAATTATGAGCAAGATGCAGTAGAGCTAGAGTCAAGTCTGGTAATGGAAAGT
GACCGGACTATTGAGAGCTCAAGACTGGAAGTTGAAGAAGAGGATGTATTCAGCTCTACA
ATGGATAGACCAATGAATGCTGCAGCCATTGCTGAGGCTGAAGCCATAGCCCGAGGTTTG
CAGACAATAAGAAATTTTGACTTGGAAGAGCTGCGAGAAGCTGGGATCCTGGGNGCNAAN
TCNAAAANNCTTTGGCACCGTCTATCATGGAAAATGGAGAAGGTCAATTGGTATCAAAGA
ATAAAGTCAGCTGCTTCACAGGAAGACCATCTGAACG
■■Homology search results ■■ -
sp_hit_id Q9V2T8
Definition sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus
Align length 45
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914779|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_G08.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfa...    33   1.0  
sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shiba...    33   1.0  
sp|A6QAX8|PDXJ_SULNB Pyridoxine 5'-phosphate synthase OS=Sulfuro...    30   8.8  
sp|Q55DU7|GDT4_DICDI Probable serine/threonine-protein kinase gd...    30   8.8  

>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus
           solfataricus GN=thsB PE=3 SV=2
          Length = 554

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +1

Query: 55  DEAKIDICKKGIVDEGGVAINAEDLLYKEVNNTV---GQREHEQI 180
           DE   D  K  ++  G +A  AEDLLYKE++ T+   G ++ E+I
Sbjct: 96  DEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEI 140


>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae
           GN=thsB PE=1 SV=1
          Length = 552

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +1

Query: 55  DEAKIDICKKGIVDEGGVAINAEDLLYKEVNNTV---GQREHEQI 180
           DE   D  K  ++  G +A  AEDLLYKE++ T+   G ++ E+I
Sbjct: 96  DEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEI 140


>sp|A6QAX8|PDXJ_SULNB Pyridoxine 5'-phosphate synthase OS=Sulfurovum
           sp. (strain NBC37-1) GN=pdxJ PE=3 SV=1
          Length = 258

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +1

Query: 79  KKGIVDEGGVAINAEDLLYKEVNNTVGQREHEQILHVNYEQDAVELESSLVME 237
           ++ +  EGG+A+  E    +E    + ++E E  L ++   DAV+  S L +E
Sbjct: 95  REEVTTEGGLAVTGEQTRLQEAIKRLQEKEIEVSLFIDPASDAVKASSDLGVE 147


>sp|Q55DU7|GDT4_DICDI Probable serine/threonine-protein kinase gdt4
           OS=Dictyostelium discoideum GN=gdt4 PE=3 SV=2
          Length = 1620

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
 Frame = +1

Query: 70  DICKKGIVDEGGVA---INAEDLLYKEVNN---------TVGQREHEQILHVNYEQDAVE 213
           D+C K + ++ GV    +++  L  KE  N         T+G  E+ QI ++N   + V 
Sbjct: 59  DVCSKAVKNKEGVKSFILSSFPLSTKEYANVIVTKGSHMTLGDGEYHQIFNINRFLNIVC 118

Query: 214 LESSLVMESDRTIESSRLEV 273
           +E SLV  +   +  S L +
Sbjct: 119 VEGSLVFSTKDVVYMSALVI 138
tr_hit_id Q9FKL3
Definition tr|Q9FKL3|Q9FKL3_ARATH Similarity to protein kinase OS=Arabidopsis thaliana
Align length 54
Score (bit) 35.8
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914779|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_G08.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FKL3|Q9FKL3_ARATH Similarity to protein kinase OS=Arabidops...    36   3e-04
tr|A5AQB4|A5AQB4_VITVI Putative uncharacterized protein OS=Vitis...    33   8e-04
tr|A7Q6K4|A7Q6K4_VITVI Chromosome chr11 scaffold_56, whole genom...    33   0.001
tr|B8AE14|B8AE14_ORYSI Putative uncharacterized protein OS=Oryza...    31   0.004
tr|A3AC30|A3AC30_ORYSJ Putative uncharacterized protein OS=Oryza...    31   0.004
tr|Q9SA26|Q9SA26_ARATH F3O9.7 protein OS=Arabidopsis thaliana GN...    32   0.016
tr|Q0WN08|Q0WN08_ARATH Putative Ser/Thr protein kinase (Fragment...    32   0.016
tr|A3BJ75|A3BJ75_ORYSJ Putative uncharacterized protein OS=Oryza...    30   0.018
tr|B8B5N5|B8B5N5_ORYSI Putative uncharacterized protein OS=Oryza...    30   0.018
tr|Q5XTZ4|Q5XTZ4_MAIZE Salt-inducible protein kinase OS=Zea mays...    30   0.021
tr|A7P2P9|A7P2P9_VITVI Chromosome chr1 scaffold_5, whole genome ...    29   0.040
tr|A9SX50|A9SX50_PHYPA Predicted protein (Fragment) OS=Physcomit...    29   0.056
tr|A5B005|A5B005_VITVI Putative uncharacterized protein OS=Vitis...    30   0.059
tr|A3CJ16|A3CJ16_ORYSJ Putative uncharacterized protein OS=Oryza...    30   0.071
tr|B8BMT2|B8BMT2_ORYSI Putative uncharacterized protein OS=Oryza...    30   0.071
tr|Q0IM68|Q0IM68_ORYSJ Os12g0594300 protein OS=Oryza sativa subs...    30   0.076
tr|Q9SAJ2|Q9SAJ2_ARATH T8K14.1 protein OS=Arabidopsis thaliana G...    30   0.13 
tr|A7QMH3|A7QMH3_VITVI Chromosome chr19 scaffold_126, whole geno...    30   0.16 
tr|A5ANC3|A5ANC3_VITVI Putative uncharacterized protein OS=Vitis...    29   0.21 
tr|A7NXT1|A7NXT1_VITVI Chromosome chr5 scaffold_2, whole genome ...    29   0.21 
tr|Q6K9J0|Q6K9J0_ORYSJ Protein kinase-like OS=Oryza sativa subsp...    31   0.28 
tr|Q0DWZ1|Q0DWZ1_ORYSJ Os02g0786200 protein OS=Oryza sativa subs...    31   0.28 
tr|O64768|O64768_ARATH Putative uncharacterized protein At2g3505...    29   0.45 
tr|Q1RSI5|Q1RSI5_MEDTR Octicosapeptide/Phox/Bem1p; Protein kinas...    29   0.45 
tr|Q0WMT5|Q0WMT5_ARATH Putative uncharacterized protein At1g7957...    30   0.76 
tr|A9SCX4|A9SCX4_PHYPA Predicted protein OS=Physcomitrella paten...    29   3.8  
tr|Q5AB43|Q5AB43_CANAL Putative uncharacterized protein MEF2 OS=...    34   5.0  
tr|Q5AAV3|Q5AAV3_CANAL Putative uncharacterized protein MEF2 OS=...    34   5.0  
tr|O23015|O23015_ARATH T1G11.5 protein OS=Arabidopsis thaliana G...    27   5.7  
tr|A4J0Q4|A4J0Q4_DESRM PRC-barrel domain protein OS=Desulfotomac...    33   6.5  

>tr|Q9FKL3|Q9FKL3_ARATH Similarity to protein kinase OS=Arabidopsis
           thaliana GN=At5g57610 PE=4 SV=1
          Length = 1054

 Score = 35.8 bits (81), Expect(3) = 3e-04
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +1

Query: 253 ESSRLEVEEEDVFSSTMDRPMNXXXXXXXXXXX---RGLQTIRNFDLEELREAG 405
           ES  +  ++E    S  D P N              RGLQ+IRN DLEE+RE G
Sbjct: 735 ESEHMNAQDEPEIDSDSDNPNNFKIEQTKAEAEAKSRGLQSIRNDDLEEIRELG 788



 Score = 25.8 bits (55), Expect(3) = 3e-04
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           +G+VYHGKW+ S
Sbjct: 792 YGSVYHGKWKGS 803



 Score = 24.6 bits (52), Expect(3) = 3e-04
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 GEGQLVSKNKVSCFTGRPSE 515
           G    + + K SCF G+PSE
Sbjct: 802 GSDVAIKRIKASCFAGKPSE 821


>tr|A5AQB4|A5AQB4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_010028 PE=4 SV=1
          Length = 4128

 Score = 33.1 bits (74), Expect(3) = 8e-04
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
 Frame = +1

Query: 4    ESVKQPVYQETAVFLRTDEAKIDICKKGIVDEGGVAINAEDLLYKEVNNTVGQREHEQIL 183
            ++V +PV  + A     ++AK+D+     + E          L   V     +   E   
Sbjct: 857  DNVFKPVVNDCAPL--EEDAKLDVSNLSFLPE----------LIASVKRAALESAEEVKA 904

Query: 184  HVNYEQDAVEL----ESSLVMESDRTIESSRLEVEEEDVFSSTMDRPMNXXXXXXXXXXX 351
             V    DAV      E+S  +E+   +    L+ + ++V +  ++               
Sbjct: 905  KVQENADAVHASSTKEASNELETANALGDLELDSDNDNVNTFKIE-----PTKAEEEALS 959

Query: 352  RGLQTIRNFDLEELRE--AGILGAXSKXLW 435
            RGLQTI+N DLEE+RE  +G  GA     W
Sbjct: 960  RGLQTIKNDDLEEIRELGSGTYGAVYHGKW 989



 Score = 25.8 bits (55), Expect(3) = 8e-04
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 456  GEGQLVSKNKVSCFTGRPSE 515
            G    + + K SCF GRPSE
Sbjct: 991  GSDVAIKRIKASCFAGRPSE 1010



 Score = 25.4 bits (54), Expect(3) = 8e-04
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 431  FGTVYHGKWRRS 466
            +G VYHGKW+ S
Sbjct: 981  YGAVYHGKWKGS 992


>tr|A7Q6K4|A7Q6K4_VITVI Chromosome chr11 scaffold_56, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00031430001
            PE=4 SV=1
          Length = 1063

 Score = 33.1 bits (74), Expect(3) = 0.001
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
 Frame = +1

Query: 4    ESVKQPVYQETAVFLRTDEAKIDICKKGIVDEGGVAINAEDLLYKEVNNTVGQREHEQIL 183
            ++V +PV  + A     ++AK+D+     + E          L   V     +   E   
Sbjct: 677  DNVFKPVVNDCAPL--EEDAKLDVSNLSFLPE----------LIASVKRAALESAEEVKA 724

Query: 184  HVNYEQDAVEL----ESSLVMESDRTIESSRLEVEEEDVFSSTMDRPMNXXXXXXXXXXX 351
             V    DAV      E+S  +E+   +    L+ + ++V +  ++               
Sbjct: 725  KVQENADAVHASSTKEASNELETANALGDLELDSDNDNVNTFKIE-----PTKAEEEALS 779

Query: 352  RGLQTIRNFDLEELRE--AGILGAXSKXLW 435
            RGLQTI+N DLEE+RE  +G  GA     W
Sbjct: 780  RGLQTIKNDDLEEIRELGSGTYGAVYHGKW 809



 Score = 25.8 bits (55), Expect(3) = 0.001
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 GEGQLVSKNKVSCFTGRPSE 515
           G    + + K SCF GRPSE
Sbjct: 811 GSDVAIKRIKASCFAGRPSE 830



 Score = 25.4 bits (54), Expect(3) = 0.001
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           +G VYHGKW+ S
Sbjct: 801 YGAVYHGKWKGS 812


>tr|B8AE14|B8AE14_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09208 PE=4 SV=1
          Length = 1083

 Score = 31.2 bits (69), Expect(3) = 0.004
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +1

Query: 352 RGLQTIRNFDLEELRE--AGILGAXSKXLW 435
           +GLQTI+N DLEE+RE  +G  GA     W
Sbjct: 800 KGLQTIKNDDLEEIRELGSGTYGAVYHGKW 829



 Score = 25.8 bits (55), Expect(3) = 0.004
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 431 FGTVYHGKWR 460
           +G VYHGKWR
Sbjct: 821 YGAVYHGKWR 830



 Score = 25.0 bits (53), Expect(3) = 0.004
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 471 VSKNKVSCFTGRPSE 515
           + + K SCF GRPSE
Sbjct: 836 IKRIKASCFAGRPSE 850


>tr|A3AC30|A3AC30_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008352 PE=3 SV=1
          Length = 1041

 Score = 31.2 bits (69), Expect(3) = 0.004
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +1

Query: 352 RGLQTIRNFDLEELRE--AGILGAXSKXLW 435
           +GLQTI+N DLEE+RE  +G  GA     W
Sbjct: 756 KGLQTIKNDDLEEIRELGSGTYGAVYHGKW 785



 Score = 25.8 bits (55), Expect(3) = 0.004
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 431 FGTVYHGKWR 460
           +G VYHGKWR
Sbjct: 777 YGAVYHGKWR 786



 Score = 25.0 bits (53), Expect(3) = 0.004
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 471 VSKNKVSCFTGRPSE 515
           + + K SCF GRPSE
Sbjct: 792 IKRIKASCFAGRPSE 806


>tr|Q9SA26|Q9SA26_ARATH F3O9.7 protein OS=Arabidopsis thaliana
           GN=At1g16270 PE=4 SV=1
          Length = 1147

 Score = 31.6 bits (70), Expect(2) = 0.016
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 ESDRTIESSRL-EVEEEDVFSSTMDRPMNXXXXXXXXXXXRGLQTIRNFDLEELREAG 405
           E D  +E+ R  + E+ED  S T +  +             GLQ I N DLEEL+E G
Sbjct: 813 EFDAMVENLRTSDCEQEDEKSETRNAGLPPVGPSLADYDTSGLQIIMNDDLEELKELG 870



 Score = 29.6 bits (65), Expect(2) = 0.016
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           FGTVYHGKWR S
Sbjct: 874 FGTVYHGKWRGS 885


>tr|Q0WN08|Q0WN08_ARATH Putative Ser/Thr protein kinase (Fragment)
           OS=Arabidopsis thaliana GN=At1g16270 PE=2 SV=1
          Length = 1025

 Score = 31.6 bits (70), Expect(2) = 0.016
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 ESDRTIESSRL-EVEEEDVFSSTMDRPMNXXXXXXXXXXXRGLQTIRNFDLEELREAG 405
           E D  +E+ R  + E+ED  S T +  +             GLQ I N DLEEL+E G
Sbjct: 691 EFDAMVENLRTSDCEQEDEKSETRNAGLPPVGPSLADYDTSGLQIIMNDDLEELKELG 748



 Score = 29.6 bits (65), Expect(2) = 0.016
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           FGTVYHGKWR S
Sbjct: 752 FGTVYHGKWRGS 763


>tr|A3BJ75|A3BJ75_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023097 PE=4 SV=1
          Length = 1174

 Score = 29.6 bits (65), Expect(3) = 0.018
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           FGTVYHGKWR S
Sbjct: 907 FGTVYHGKWRGS 918



 Score = 26.2 bits (56), Expect(3) = 0.018
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 358 LQTIRNFDLEELREAG 405
           LQ I+N DLEELRE G
Sbjct: 888 LQIIKNEDLEELRELG 903



 Score = 23.9 bits (50), Expect(3) = 0.018
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 GEGQLVSKNKVSCFTGRPSE 515
           G    + + K SCFTGR SE
Sbjct: 917 GSDVAIKRIKKSCFTGRSSE 936


>tr|B8B5N5|B8B5N5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25817 PE=4 SV=1
          Length = 1068

 Score = 29.6 bits (65), Expect(3) = 0.018
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           FGTVYHGKWR S
Sbjct: 801 FGTVYHGKWRGS 812



 Score = 26.2 bits (56), Expect(3) = 0.018
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 358 LQTIRNFDLEELREAG 405
           LQ I+N DLEELRE G
Sbjct: 782 LQIIKNEDLEELRELG 797



 Score = 23.9 bits (50), Expect(3) = 0.018
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 GEGQLVSKNKVSCFTGRPSE 515
           G    + + K SCFTGR SE
Sbjct: 811 GSDVAIKRIKKSCFTGRSSE 830


>tr|Q5XTZ4|Q5XTZ4_MAIZE Salt-inducible protein kinase OS=Zea mays
           PE=2 SV=1
          Length = 323

 Score = 29.6 bits (65), Expect(3) = 0.021
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 431 FGTVYHGKWRRS 466
           FGTVYHGKWR S
Sbjct: 57  FGTVYHGKWRGS 68



 Score = 26.2 bits (56), Expect(3) = 0.021
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 358 LQTIRNFDLEELREAG 405
           LQ I+N DLEELRE G
Sbjct: 38  LQIIKNEDLEELRELG 53



 Score = 23.9 bits (50), Expect(3) = 0.021
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 GEGQLVSKNKVSCFTGRPSE 515
           G    + + K SCFTGR SE
Sbjct: 67  GSDVAIKRIKKSCFTGRSSE 86