BP914524 |
Clone id |
YMU001_000059_H02 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000059_H02. |
Accession |
BP914524 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGATGCAGGTGCCTCCTATAAGGATGCGGAGTGCAGTGAGGCAATCGAGGGTCGAAAGC CACGGAAGAGAGGGAGGAAGCCTGCTAATGGAAGGGAGGAGCCATTGAATCATGTGGAGG CAGAGCGCCAAAGAAGGGAGAAGCTCAACCAGCGTTTCTATGCCTTGAGAGCTGTGGTGC CACATGTGTCAAAAATGGACAAGGCTTCACTCCTCAATGATGCTGCCTTGTACATTCAGG AGCTCAAACGCAAGCTGAATGAGCTAGAGACGGAGAAGAAGGAATTGGCTTCTCAATTGG AGGTGGCCAAGATGGAGACCCTTGTTCACAGGAAGTGCTCTGCGTACCGTCCGAGCTTAC ATGATGTTCACAAGAGGATGGGTGTTAAAATCCACTTTCTAGGTGGTAGAGAAGCAATGA TCCAGGTGGATGGCCCCAAAGAGTTATACCCTGTGGCCAAGGTTATGGCGGCCTTGCAAG ACCTGCAGCTTGAAGTCCACCATGCTAGTCTGTCTACAGGTCAAGATCGTGTACATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39204 |
Definition |
sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana |
Align length |
152 |
Score (bit) |
133.0 |
E-value |
6.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1N8M0 |
Definition |
tr|B1N8M0|B1N8M0_BRAOG MYC OS=Brassica oleracea var. gemmifera |
Align length |
154 |
Score (bit) |
133.0 |
E-value |
7.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914524|Adiantum capillus-veneris mRNA, clone: YMU001_000059_H02. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B1N8M0|B1N8M0_BRAOG MYC OS=Brassica oleracea var. gemmifera P... 133 7e-30 tr|Q700B9|Q700B9_SOLTU MYC transcription factor (Fragment) OS=So... 129 7e-29 tr|B8LLA6|B8LLA6_PICSI Putative uncharacterized protein OS=Picea... 128 2e-28 tr|B8LLU3|B8LLU3_PICSI Putative uncharacterized protein OS=Picea... 127 4e-28 tr|Q400L2|Q400L2_CATRO MYC2 OS=Catharanthus roseus GN=myc2 PE=2 ... 126 6e-28 tr|Q4JKA7|Q4JKA7_RHEAU Basic helix-loop-helix transcription fact... 122 1e-26 tr|Q700C0|Q700C0_SOLTU MYC transcription factor (Fragment) OS=So... 121 2e-26 tr|Q41102|Q41102_PHAVU Phaseolin G-box binding protein PG2 (Frag... 121 2e-26 tr|Q41101|Q41101_PHAVU Phaseolin G-box binding protein PG1 OS=Ph... 121 2e-26 tr|Q9ZPN6|Q9ZPN6_MAIZE Transcription factor MYC7E (Fragment) OS=... 121 3e-26 tr|Q9AYK0|Q9AYK0_ORYSA Putative MYC transcription factor OS=Oryz... 121 3e-26 tr|Q6QJB9|Q6QJB9_ORYSA MYC protein OS=Oryza sativa PE=2 SV=1 121 3e-26 tr|Q336P5|Q336P5_ORYSJ Os10g0575000 protein OS=Oryza sativa subs... 121 3e-26 tr|B8BIE0|B8BIE0_ORYSI Putative uncharacterized protein OS=Oryza... 121 3e-26 tr|Q27IK8|Q27IK8_PEA G-box element binding protein OS=Pisum sati... 120 6e-26 tr|Q25BJ5|Q25BJ5_BRAOL Basic helix-loop-helix (BHLH) family tran... 116 6e-25 tr|A9PF26|A9PF26_POPTR Putative uncharacterized protein OS=Popul... 112 1e-23 tr|A9REZ0|A9REZ0_PHYPA Predicted protein OS=Physcomitrella paten... 106 9e-22 tr|B3VI60|B3VI60_HEVBR MYC1 OS=Hevea brasiliensis GN=MYC1 PE=2 SV=1 105 1e-21 tr|A7QJ56|A7QJ56_VITVI Chromosome chr2 scaffold_105, whole genom... 105 1e-21 tr|A9SFN9|A9SFN9_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21 tr|A9SFN7|A9SFN7_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21 tr|B7ZXC6|B7ZXC6_MAIZE Putative uncharacterized protein OS=Zea m... 103 6e-21 tr|A7PXR3|A7PXR3_VITVI Chromosome chr15 scaffold_37, whole genom... 103 6e-21 tr|B6TSQ0|B6TSQ0_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 102 1e-20 tr|A6NAB4|A6NAB4_VITVI Myc2 bHLH protein OS=Vitis vinifera GN=My... 102 1e-20 tr|Q5DM34|Q5DM34_WHEAT BHLH transcription factor (Fragment) OS=T... 102 2e-20 tr|B8A061|B8A061_MAIZE Putative uncharacterized protein OS=Zea m... 102 2e-20 tr|A7QWE9|A7QWE9_VITVI Chromosome undetermined scaffold_203, who... 100 4e-20 tr|Q5NB91|Q5NB91_ORYSJ BHLH protein-like (Putative uncharacteriz... 100 6e-20
>tr|B1N8M0|B1N8M0_BRAOG MYC OS=Brassica oleracea var. gemmifera PE=2 SV=1 Length = 610
Score = 133 bits (334), Expect = 7e-30 Identities = 84/154 (54%), Positives = 101/154 (65%), Gaps = 6/154 (3%) Frame = +3
Query: 84 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXX 263 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA YI Sbjct: 430 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVTK 489
Query: 264 XXXXXXXXASQLEVAKMETLVHRKCSA-----YRPSLHDVHKRMGVKIHF-LGGREAMIQ 425 +QLE KME L RK SA SL + K +G++I + G +AMI+ Sbjct: 490 TESEKTQIKTQLEEVKME-LAGRKASAGGDLSSSCSLTAI-KPVGMEIEVKIIGWDAMIR 547
Query: 426 VDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 V+ K +P A++M+AL DL+LEV+HAS+S D Sbjct: 548 VESSKRNHPAARLMSALMDLELEVNHASMSVVND 581
>tr|Q700B9|Q700B9_SOLTU MYC transcription factor (Fragment) OS=Solanum tuberosum GN=jamyc10 PE=2 SV=1 Length = 646
Score = 129 bits (325), Expect = 7e-29 Identities = 79/152 (51%), Positives = 98/152 (64%), Gaps = 4/152 (2%) Frame = +3
Query: 84 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXX 263 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA YI Sbjct: 465 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVQN 524
Query: 264 XXXXXXXXASQLEVAKMETLVHRKCSAYR---PSLHDVH-KRMGVKIHFLGGREAMIQVD 431 SQ+E + E L ++ S Y PS D+ M + + +G +AMI++ Sbjct: 525 SDLDKEELRSQIESLRKE-LANKGSSNYSSSPPSNQDLKIVDMDIDVKVIGW-DAMIRIQ 582
Query: 432 GPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 K+ +P A++MAAL+DL L+VHHAS+S D Sbjct: 583 CSKKNHPAARLMAALKDLDLDVHHASVSVVND 614
>tr|B8LLA6|B8LLA6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 590
Score = 128 bits (321), Expect = 2e-28 Identities = 82/186 (44%), Positives = 101/186 (54%), Gaps = 14/186 (7%) Frame = +3
Query: 18 YKDAECSE----AIEXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPH 185 + D E SE +E ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+ Sbjct: 393 HSDVEASERRPVVVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPN 452
Query: 186 VSKMDKASLLNDAALYIQXXXXXXXXXXXXXXXXASQLEVAKMETLVHRKCSAYRPSLHD 365 +SKMDKASLL DA YIQ Q +V MET K +P L Sbjct: 453 ISKMDKASLLGDAISYIQEL----------------QNKVKDMET---EKEKQQQPQLQQ 493
Query: 366 VHKRM----------GVKIHFLGGREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASLS 515 + + + + G EA ++V PKE +PV +VM ALQ LQL+VHHA++S Sbjct: 494 AKSNIQDGRIVDPISDIDVQMMSG-EATVRVSCPKESHPVGRVMLALQRLQLDVHHANIS 552
Query: 516 TGQDRV 533 + + Sbjct: 553 AANENI 558
>tr|B8LLU3|B8LLU3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 582
Score = 127 bits (319), Expect = 4e-28 Identities = 82/185 (44%), Positives = 106/185 (57%), Gaps = 10/185 (5%) Frame = +3
Query: 3 DAGASYKDAECSEAIEXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVP 182 + AS KD+ + A+ ANGREEPLNHVEAERQRREKLNQ+FY LRAVVP Sbjct: 367 EPSASIKDS--TSAVVERKPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYELRAVVP 424
Query: 183 HVSKMDKASLLNDAALYIQXXXXXXXXXXXXXXXXASQLEVAKMETLVH--RKCSAYRPS 356 +VSKMDKASLL DAA YI+ Q+E K E L++ + + Sbjct: 425 NVSKMDKASLLGDAAAYIKDLCSKQQDLESERVELQDQIESVKKELLMNSLKLAAKEATD 484
Query: 357 LHDVHKRMGVKIHFLG--------GREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASL 512 L + + + F G GREA+I++ K +PVA++M ALQ+L LEV HAS+ Sbjct: 485 LSSIDLKGFSQGKFPGLNSEVRILGREAIIRIQCTKHNHPVARLMTALQELDLEVLHASI 544
Query: 513 STGQD 527 ST +D Sbjct: 545 STVKD 549
>tr|Q400L2|Q400L2_CATRO MYC2 OS=Catharanthus roseus GN=myc2 PE=2 SV=1 Length = 699
Score = 126 bits (317), Expect = 6e-28 Identities = 83/178 (46%), Positives = 102/178 (57%), Gaps = 9/178 (5%) Frame = +3
Query: 21 KDAECSEAIEXXXXXXXXXXX-ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKM 197 K+AE S ++ ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKM Sbjct: 486 KEAESSRVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKM 545
Query: 198 DKASLLNDAALYIQXXXXXXXXXXXXXXXXASQLEVAKME--TLVHRKCSAYRPSLHDVH 371 DKASLL DA YI +QL+ K E + R S+ L + Sbjct: 546 DKASLLGDAISYINELKAKLQTTETDKDELKNQLDSLKKELASKESRLLSSPDQDLKSSN 605
Query: 372 KR------MGVKIHFLGGREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 K+ M + + + GREAMI+V K +P A+VM AL+DL LE+ HAS+S D Sbjct: 606 KQSVGNLDMDIDVKII-GREAMIRVQSSKNNHPAARVMGALKDLDLELLHASVSVVND 662
>tr|Q4JKA7|Q4JKA7_RHEAU Basic helix-loop-helix transcription factor protein OS=Rheum australe PE=2 SV=1 Length = 720
Score = 122 bits (306), Expect = 1e-26 Identities = 79/169 (46%), Positives = 98/169 (57%), Gaps = 21/169 (12%) Frame = +3
Query: 84 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXX 263 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA +I Sbjct: 520 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISFINELKSKLQN 579
Query: 264 XXXXXXXXASQLEVAKMETLVHRKCSA------------YRPSL-HDVHKRMG------- 383 SQ+E K E L R + + PSL D++ G Sbjct: 580 VESEKETLLSQVECLKTEVLASRDHQSRSSNGGGGVQNHHHPSLEQDMNMLNGSCKQSDL 639
Query: 384 -VKIHFLGGREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 V + + GR+AM++V+ K +P A++M AL++L LEV HAS+S D Sbjct: 640 DVDVKII-GRDAMVRVNCSKSNHPAARLMVALKELDLEVTHASVSVVND 687
>tr|Q700C0|Q700C0_SOLTU MYC transcription factor (Fragment) OS=Solanum tuberosum GN=jamyc2 PE=2 SV=1 Length = 692
Score = 121 bits (304), Expect = 2e-26 Identities = 82/173 (47%), Positives = 101/173 (58%), Gaps = 4/173 (2%) Frame = +3
Query: 21 KDAECSEAIEXXXXXXXXXXX-ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKM 197 K+A+ S +E ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKM Sbjct: 487 KEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKM 546
Query: 198 DKASLLNDAALYIQXXXXXXXXXXXXXXXXASQLEVAKMETLVHRKCSAYRPS--LHDVH 371 DKASLL DA YI SQ+E K E+ R+ P+ L Sbjct: 547 DKASLLGDAISYINELKSKLQNTESDKEDLKSQIEDLKKES---RRPGPPPPNQDLKIGG 603
Query: 372 KRMGVKIHF-LGGREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 K + V I + G +AMI + K+ +P A++MAAL +L L+VHHAS+S D Sbjct: 604 KIVDVDIDVKIIGWDAMIGIQCNKKNHPAARLMAALMELDLDVHHASVSVVND 656
>tr|Q41102|Q41102_PHAVU Phaseolin G-box binding protein PG2 (Fragment) OS=Phaseolus vulgaris GN=PG2 PE=2 SV=1 Length = 614
Score = 121 bits (304), Expect = 2e-26 Identities = 77/161 (47%), Positives = 92/161 (57%), Gaps = 13/161 (8%) Frame = +3
Query: 84 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXX 263 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA YI Sbjct: 426 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQN 485
Query: 264 XXXXXXXXASQLEVAKMETLVHRKCSAYRPSLHDVHK-------------RMGVKIHFLG 404 QLE K E K S S H H + + + +G Sbjct: 486 LESDKDGLQKQLEGVKKEL---EKSSDNVSSNHTKHGGNSNIKSSNQALIDLDIDVKIIG 542
Query: 405 GREAMIQVDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 +AMI++ K+ +P A++MAAL +L L+VHHAS+S D Sbjct: 543 W-DAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVND 582
>tr|Q41101|Q41101_PHAVU Phaseolin G-box binding protein PG1 OS=Phaseolus vulgaris GN=PG1 PE=2 SV=1 Length = 642
Score = 121 bits (304), Expect = 2e-26 Identities = 73/157 (46%), Positives = 95/157 (60%), Gaps = 10/157 (6%) Frame = +3
Query: 87 NGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXXX 266 NGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA YI Sbjct: 455 NGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLSEL 514
Query: 267 XXXXXXXASQLEVAKMETLVHRKCSAYRPSLHDVHKR----------MGVKIHFLGGREA 416 QLE+ K E + K + P +K + +++ +G +A Sbjct: 515 ESEKGELEKQLELVKKELELATKSPSPPPGPPPSNKEAKETTSKLIDLELEVKIIGW-DA 573
Query: 417 MIQVDGPKELYPVAKVMAALQDLQLEVHHASLSTGQD 527 MI++ K+ +P A++MAAL++L L+V+HAS+S D Sbjct: 574 MIRIQCSKKNHPAARLMAALKELDLDVNHASVSVVND 610
>tr|Q9ZPN6|Q9ZPN6_MAIZE Transcription factor MYC7E (Fragment) OS=Zea mays PE=2 SV=1 Length = 702
Score = 121 bits (303), Expect = 3e-26 Identities = 76/150 (50%), Positives = 92/150 (61%), Gaps = 2/150 (1%) Frame = +3
Query: 84 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPHVSKMDKASLLNDAALYIQXXXXXXXX 263 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP+VSKMDKASLL DA YI Sbjct: 516 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTS 575
Query: 264 XXXXXXXXASQLEVAKMETLVHRKCSAYRPSLHDVHKRM-GVKIHF-LGGREAMIQVDGP 437 +Q+E K E + HD R V+I + G EAMI+V Sbjct: 576 LETDKETLQTQVEALKKERDARPPSHSAGLGGHDGGPRCHAVEIDAKILGLEAMIRVQCH 635
Query: 438 KELYPVAKVMAALQDLQLEVHHASLSTGQD 527 K +P A++M AL++L L+V+HAS+S +D Sbjct: 636 KRNHPSARLMTALRELDLDVYHASVSVVKD 665
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