BP914495
Clone id YMU001_000059_E08
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTAGGATATGATCCCCAAGGTTATCTTGCATGCTACGATAGGAGATGACAAGC
CGAGGTGTACCTGAGGACCAAATGAATTTGGCTTTTGGACAGTTTGTGGATTTGAATTTG
AAACAAGTGTACCAAGAGGTAGCAGAGTGTTCTTTCCAACGGTGGAGTGAATTTGCAGAC
GCTTTGATCCATGCAAGCTTTGCGGTACTAGACCTTGAGATTGAACAACTTACATCCAAA
AAACAAAGGCAATGTGAAGATGATTTAAGCGATAAATCGAGGGCTTTTACATCGGTATGT
ACCCAGCAAGAGGCTCTTCTAAATTTGAGTGATTTGAAGGATAACGCATTATTGGATATT
GAAGACGTGGACATAGTTGAAACTGGATAAGCTAGTTTCCGATTGTATGATGGAAAAAGT
GAGCCTGAGAGTTTGCAAAGTAGTGATCAGGATTCTTTTAAGAAACCTACGGAGATTTCC
ACGGATGAATCGTGTGAGTATAAATTAATTTGGTTATTTGAAGCTCACGATGAAGCTGAT
ATCGAGGATCTACAAGATGATGCCA
■■Homology search results ■■ -
sp_hit_id Q118P4
Definition sp|Q118P4|TIG_TRIEI Trigger factor OS=Trichodesmium erythraeum (strain IMS101)
Align length 84
Score (bit) 34.3
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914495|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E08.
(565 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q118P4|TIG_TRIEI Trigger factor OS=Trichodesmium erythraeum (... 34 0.44
sp|Q6TGC4|PADI6_HUMAN Protein-arginine deiminase type-6 OS=Homo ... 32 1.7
sp|Q10059|CDC12_SCHPO Cell division control protein 12 OS=Schizo... 32 2.9
sp|Q6YXR1|CEMA_PHYPA Chloroplast envelope membrane protein OS=Ph... 31 4.8
sp|A2T345|CEMA_ANGEV Chloroplast envelope membrane protein OS=An... 31 4.8
sp|Q9JL35|NSBP1_MOUSE Nucleosome-binding protein 1 OS=Mus muscul... 31 4.9
sp|Q7V9T7|HEM6_PROMA Coproporphyrinogen 3 oxidase, aerobic OS=Pr... 31 4.9
sp|Q6AY04|CB047_RAT Uncharacterized protein C2orf47 homolog, mit... 31 4.9
sp|P43611|YFK9_YEAST Uncharacterized protein YFR039C OS=Saccharo... 30 6.4
sp|Q9VIS1|CDGAP_DROME GTPase-activating protein CdGAPr OS=Drosop... 30 6.4
sp|Q8BHE8|CB047_MOUSE Uncharacterized protein C2orf47 homolog, m... 30 6.4
sp|P21981|TGM2_MOUSE Protein-glutamine gamma-glutamyltransferase... 30 8.2
sp|P12211|CEMA_MARPO Chloroplast envelope membrane protein OS=Ma... 30 8.2
sp|Q85AP4|CEMA_ANTFO Chloroplast envelope membrane protein OS=An... 30 8.2
sp|A4UGR9|XIRP2_HUMAN Xin actin-binding repeat-containing protei... 30 8.3
sp|O95786|DDX58_HUMAN Probable ATP-dependent RNA helicase DDX58 ... 30 8.3

>sp|Q118P4|TIG_TRIEI Trigger factor OS=Trichodesmium erythraeum
(strain IMS101) GN=tig PE=3 SV=1
Length = 485

Score = 34.3 bits (77), Expect = 0.44
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1

Query: 79 QMNLAFGQFVDLNLKQVY----QEVAECSFQRWSEFADALIHASFAVLDLEIEQLTSKKQ 246
QM+L GQF+ ++ + QE E S Q SE+++A + V + +++L K+
Sbjct: 201 QMDLKEGQFIPGFIEGIVGMKLQETKEISAQFPSEYSEANLAGKPVVFTVTLKELKEKEL 260

Query: 247 RQCEDDLSDKSRAFTSVCTQQEAL 318
+ +DDL+ + F ++ +E L
Sbjct: 261 PELDDDLAQEISEFETIDKLREFL 284


>sp|Q6TGC4|PADI6_HUMAN Protein-arginine deiminase type-6 OS=Homo
sapiens GN=PADI6 PE=2 SV=2
Length = 686

Score = 32.3 bits (72), Expect = 1.7
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = -3

Query: 416 FPS--YNRKLAYPVSTMSTS---SISNNALSFKSLKFRRASC-WVHTDVKALDLSLKSSS 255
FPS ++ ++Y VS + S SI L ++ FR A C ++ L++ L
Sbjct: 256 FPSAEFSGLISYSVSLVEESQDPSIPETVLYKDTVVFRVAPCVFIPCTQVPLEVYLCREL 315

Query: 254 HCLCFLDVSCSISRSSTAKLAWIKASANSLHRWKEHSATSWYTCFKFKSTN 102
F+D +S S +++A + N L RW + YT K+T+
Sbjct: 316 QLQGFVDTVTKLSEKSNSQVASVYEDPNRLGRWLQDEMAFCYTQAPHKTTS 366


>sp|Q10059|CDC12_SCHPO Cell division control protein 12
OS=Schizosaccharomyces pombe GN=cdc12 PE=1 SV=1
Length = 1841

Score = 31.6 bits (70), Expect = 2.9
Identities = 26/118 (22%), Positives = 48/118 (40%)
Frame = +1

Query: 109 DLNLKQVYQEVAECSFQRWSEFADALIHASFAVLDLEIEQLTSKKQRQCEDDLSDKSRAF 288
++ L+++Y + SFQ + + +I LDL +++ ++ D + DK R
Sbjct: 723 EVELRELYLLINSDSFQGSTNSKERIIEYLLDKLDLRKKEIAAESTLWSNDGIDDKLRDL 782

Query: 289 TSVCTQQEALLNLSDLKDNALLDIEDVDIVETG*ASFRLYDGKSEPESLQSSDQDSFK 462
++Q + + +L I D Y G+S ESL S +S K
Sbjct: 783 REQMSRQSS----QPSTVSTILQIPDKKFHRPFPRHLHRYVGRSASESLTSEKDESIK 836


>sp|Q6YXR1|CEMA_PHYPA Chloroplast envelope membrane protein
OS=Physcomitrella patens GN=cemA PE=3 SV=1
Length = 439

Score = 30.8 bits (68), Expect = 4.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3

Query: 200 KLAWIKASANSLHRWKEHSATSWYTCFKFKS 108
KLAWI+AS N L WK + + S+++ K K+
Sbjct: 124 KLAWIEASLNDLDMWKYYYSFSFFSKEKQKT 154


>sp|A2T345|CEMA_ANGEV Chloroplast envelope membrane protein
OS=Angiopteris evecta GN=cemA PE=3 SV=1
Length = 448

Score = 30.8 bits (68), Expect = 4.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3

Query: 200 KLAWIKASANSLHRWKEHSATSWYTCFKFKSTNCPKAKFIWSSGTPRLVISYRSM 36
KLAWI+A+ N L W+ HS + + + K ++ + + S TP +++Y S+
Sbjct: 134 KLAWIEATLNDLDIWR-HSYSVFSSSTKMENNLEQQFSVLESKDTPITMMAYESI 187


>sp|Q9JL35|NSBP1_MOUSE Nucleosome-binding protein 1 OS=Mus musculus
GN=Nsbp1 PE=1 SV=2
Length = 406

Score = 30.8 bits (68), Expect = 4.9
Identities = 22/92 (23%), Positives = 37/92 (40%)
Frame = +1

Query: 214 LEIEQLTSKKQRQCEDDLSDKSRAFTSVCTQQEALLNLSDLKDNALLDIEDVDIVETG*A 393
+E E++ + E+D +K A + E N+ D++ +D D E
Sbjct: 92 MEAEEVKEQINEDTEEDGGEKKEAVAAEAKDDELKANIQDVE-------KDEDGKEHKDT 144

Query: 394 SFRLYDGKSEPESLQSSDQDSFKKPTEISTDE 489
+ DGK E E L + + E+S DE
Sbjct: 145 GEEVEDGKIEEEGLNEKPGTAKSEDAEVSKDE 176


>sp|Q7V9T7|HEM6_PROMA Coproporphyrinogen 3 oxidase, aerobic
OS=Prochlorococcus marinus GN=hemF PE=3 SV=1
Length = 343

Score = 30.8 bits (68), Expect = 4.9
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1

Query: 406 YDGKSEPESLQSSDQDSFKKPTEISTDESCEYK 504
Y K+ PES +S D F KP E TDES E K
Sbjct: 303 YGFKAPPESRESLLTDVFTKPQEWFTDESLEEK 335


>sp|Q6AY04|CB047_RAT Uncharacterized protein C2orf47 homolog,
mitochondrial OS=Rattus norvegicus PE=2 SV=1
Length = 291

Score = 30.8 bits (68), Expect = 4.9
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1

Query: 151 SFQRWSEFADALIHASFAVLDLEIEQLTSKKQRQCEDDLSDKSRAFTSVCTQQEALLNLS 330
+F W+ F A F+ + SK QC+ DL ++ A + +E + +LS
Sbjct: 128 AFLIWAYFDKEFSIAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQVLKEKVASLS 187

Query: 331 DLKDNAL-LDIEDVDIVETG*ASFRLYDGK 417
D NAL DI+D+ TG S YD K
Sbjct: 188 DNHKNALAADIDDIVYTSTGDISI-YYDEK 216


>sp|P43611|YFK9_YEAST Uncharacterized protein YFR039C
OS=Saccharomyces cerevisiae GN=YFR039C PE=1 SV=1
Length = 510

Score = 30.4 bits (67), Expect = 6.4
Identities = 18/98 (18%), Positives = 44/98 (44%)
Frame = +1

Query: 49 EMTSRGVPEDQMNLAFGQFVDLNLKQVYQEVAECSFQRWSEFADALIHASFAVLDLEIEQ 228
++ + + +D + G L+ E + ++ W + D+ IH++ A+LD EI+
Sbjct: 217 QLVTAAILQDLSKIIIGSNSHAELETYEAESLKMEYEAWIKAIDSKIHSAMALLDSEIQS 276

Query: 229 LTSKKQRQCEDDLSDKSRAFTSVCTQQEALLNLSDLKD 342
+ + + +++ + +Q L+ S +KD
Sbjct: 277 VFEAEVQNKSIEITRNLDDLNTTVNEQLVFLD-SKIKD 313


>sp|Q9VIS1|CDGAP_DROME GTPase-activating protein CdGAPr
OS=Drosophila melanogaster GN=CdGAPr PE=1 SV=2
Length = 1843

Score = 30.4 bits (67), Expect = 6.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2

Query: 204 RKACMDQSVCKFTPPLERTLCYLLVHLFQIQIH 106
R M ++V K PP RTL YL HL+++ H
Sbjct: 532 RLRLMKETVLKLPPPHYRTLKYLAEHLYKVSQH 564


tr_hit_id B7BW70
Definition tr|B7BW70|B7BW70_9FIRM Putative uncharacterized protein (Fragment) OS=Roseburia intestinalis L1-82
Align length 81
Score (bit) 35.8
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914495|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E08.
(565 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7BW70|B7BW70_9FIRM Putative uncharacterized protein (Fragmen... 36 1.7
tr|A7K921|A7K921_9PHYC Putative uncharacterized protein z411L OS... 34 6.3
tr|Q6ZUB8|Q6ZUB8_HUMAN cDNA FLJ43836 fis, clone TESTI4005857 OS=... 34 6.3
tr|Q6ZRL6|Q6ZRL6_HUMAN cDNA FLJ46261 fis, clone TESTI4025062 OS=... 34 6.3
tr|B6PT74|B6PT74_BRAFL Putative uncharacterized protein OS=Branc... 34 6.4
tr|B4JGY5|B4JGY5_DROGR GH18112 OS=Drosophila grimshawi GN=GH1811... 33 8.3
tr|Q12VX0|Q12VX0_METBU Condensin subunit Smc OS=Methanococcoides... 33 8.3

>tr|B7BW70|B7BW70_9FIRM Putative uncharacterized protein (Fragment)
OS=Roseburia intestinalis L1-82 GN=ROSINTL182_01000 PE=4
SV=1
Length = 395

Score = 35.8 bits (81), Expect = 1.7
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1

Query: 139 VAECSFQRWSEFADALIHASFAVLD--LEIEQLTSKKQRQCEDDLSDKSRAFTSVCTQQE 312
+A+ + R E DAL+H++ V++ LE+E+ S+ +Q D + TQ +
Sbjct: 132 IAKLTLARNKENTDALMHSNEQVIEKTLEVEEKLSENSQQIMDMQRNLMDEKLQELTQSQ 191

Query: 313 ALL--NLSDLKDNALLDIEDV 369
L+ NL+D+K++ D++DV
Sbjct: 192 KLVLDNLNDVKESLQSDMQDV 212


>tr|A7K921|A7K921_9PHYC Putative uncharacterized protein z411L
OS=Acanthocystis turfacea Chlorella virus 1 GN=z411L
PE=4 SV=1
Length = 156

Score = 33.9 bits (76), Expect = 6.3
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -3

Query: 353 NNALSFKSLKFRRASCWVHTDVKALDLSLKSSSHCLCFLDVSCSISRSSTAKLAWIKASA 174
N+A S A+ KA+ + + C +SC+ +++ + A +A A
Sbjct: 41 NSANKTTSASCSSANSRASASAKAISCASAKAISCASAKAISCASAKAISCASAKTRAEA 100

Query: 173 NSLHRWKEHSATSWYTCFKFKSTNCPKAK 87
N+ TS TC K+T CPKAK
Sbjct: 101 NT--------RTSAKTCASSKTTACPKAK 121


>tr|Q6ZUB8|Q6ZUB8_HUMAN cDNA FLJ43836 fis, clone TESTI4005857
OS=Homo sapiens PE=2 SV=1
Length = 280

Score = 33.9 bits (76), Expect = 6.3
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Frame = -3

Query: 275 LSLKSSSHCLC------FLDVSCSISRSSTAKLAWIKA--SANSLHRWKEHSATSWYTCF 120
+ L SS+ C C F SC S +S+ +W + S+ S W +++++ +C+
Sbjct: 8 MHLTSSTSCSCQSSGTSFTSCSCRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCW 67

Query: 119 K----FKSTNCPKAKFIWSSGTPRLVISYRS 39
F S +C WSSGT S RS
Sbjct: 68 SSGTSFTSCSC------WSSGTSSTPCSCRS 92


>tr|Q6ZRL6|Q6ZRL6_HUMAN cDNA FLJ46261 fis, clone TESTI4025062
OS=Homo sapiens PE=2 SV=1
Length = 280

Score = 33.9 bits (76), Expect = 6.3
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Frame = -3

Query: 275 LSLKSSSHCLC------FLDVSCSISRSSTAKLAWIKA--SANSLHRWKEHSATSWYTCF 120
+ L SS+ C C F SC S +S+ +W + S+ S W +++++ +C+
Sbjct: 8 MHLTSSTSCSCQSSGTSFTSCSCRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCW 67

Query: 119 K----FKSTNCPKAKFIWSSGTPRLVISYRS 39
F S +C WSSGT S RS
Sbjct: 68 SSGTSFTSCSC------WSSGTSSTPCSCRS 92


>tr|B6PT74|B6PT74_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_110671 PE=4 SV=1
Length = 485

Score = 33.9 bits (76), Expect = 6.4
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Frame = -1

Query: 274 YRLNHLHIAFVFWM*VVQSQGLVPQSLHG-----SKRLQIHSTVGKNTLLPLGTL----- 125
+RL+ + F + V + + PQSLH + L STV +LL L T+
Sbjct: 267 FRLSAVSPQFPLSLYPVSAAAVSPQSLHSLPSVSPQSLLSLSTVSPQSLLSLSTVSPQFP 326

Query: 124 --VSNSNPQTVQKPNSFGPQVHLGLSSPIVA 38
+ + +PQ+ P S PQ L LSSP A
Sbjct: 327 LSLPSVSPQSTLSPPSVSPQSPLCLSSPSAA 357


>tr|B4JGY5|B4JGY5_DROGR GH18112 OS=Drosophila grimshawi GN=GH18112
PE=4 SV=1
Length = 426

Score = 33.5 bits (75), Expect = 8.3
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1

Query: 217 EIEQLTSKKQRQCEDDLSD---KSRAFTSVCTQQEAL-LNLSDLKDNALLDIEDVDIVET 384
E+ +S+ ++ E++ SD A + T + L + + L++N + D+ED +++E
Sbjct: 78 ELLSCSSRLEQPFEEEYSDIGYDDEAKQELDTDYDELPIAIDKLEENEVSDVEDDELIEF 137

Query: 385 G*ASFRLYDGKSEPESLQSSDQDSFKKPTEISTDESCEYKLIWLFEAHDEADIEDLQDD 561
+ D +S+ S D DS K + D C Y D ++ D DD
Sbjct: 138 EEDNNNPTDMESDLNEDTSEDVDSLIKSVQNEIDNICRYSSDSQETLEDFRELSDNDDD 196


>tr|Q12VX0|Q12VX0_METBU Condensin subunit Smc OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1499 PE=4 SV=1
Length = 1174

Score = 33.5 bits (75), Expect = 8.3
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1

Query: 109 DLNLKQVYQEVAECSFQRWSEFADALIHASFAVLDLEIEQLTSKKQRQCEDDLSDKSRAF 288
D++ K+ QE + S + E A ++ E+ +LTS+ QR ED+ R
Sbjct: 249 DISFKKEVQEKLQLSIEERKE--------KLAGIEKELTELTSEIQRMGEDEQIQVKRDI 300

Query: 289 TSVCTQQEALLNLSDLKDNALLDIEDVD 372
+ + +N +L DN +IED+D
Sbjct: 301 EEIKGEVSRCVNSIELADN---EIEDID 325