BP914463 |
Clone id |
YMU001_000059_B11 |
Library |
YMU01 |
Length |
587 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000059_B11. |
Accession |
BP914463 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3104Contig1 |
Sequence |
TTTTTTTTTTTTTTTTTTGTAATGTAAAATCTTTTCTAGCATTTGGAACCCGCATTAATT GTTATTTGTGCAAGTGCCTGTACTTTTTTGTCTCTGCTTCTATTGGGAACCCCATACAAC CCTTGTTCCCTACAGCTATTCACAAGGTATTCAAGAAGCATCATTAGACAAGAAATCATT GTTCTGCAGTTCACACCTGCTAATCCTCCCTAACTACACGAAAGGTAAGTTACTCTTCCT CATCTTCCTCTTCTACATTCTGCTCTTGAACTTCACTGGTTGGATTAGAGGACAGTTCCT TGGCAAAATTTGCCTGCAAGTCCTCCAGCTGAAGTGCTAGTTTTTTCTCTTCATCAATAG CCACTCTCAAGTCAATTTCTGCTACCATTTGCTCCAACTCCGCATCCGCAAAGTCCTTTG CAGCGTTTTCATTCTTTGTCTTGTAATCCTTGCATTTCATTGTTTCAAAAGCTACCTTCT TGGCAGCCACAAGCCATTGTTGGGCAAGATATCCTATAGGTGCTTCCTCTGAAAGCTGCA TTTCAGTTAGACCATCCAAGAAAATATCAGATAGGTCCCACTTTTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Y2L6 |
Definition |
sp|Q9Y2L6|FRM4B_HUMAN FERM domain-containing protein 4B OS=Homo sapiens |
Align length |
90 |
Score (bit) |
35.0 |
E-value |
0.26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7AWZ5 |
Definition |
tr|B7AWZ5|B7AWZ5_9BACE Putative uncharacterized protein OS=Bacteroides pectinophilus ATCC 43243 |
Align length |
82 |
Score (bit) |
35.0 |
E-value |
2.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914463|Adiantum capillus-veneris mRNA, clone: YMU001_000059_B11. (569 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7AWZ5|B7AWZ5_9BACE Putative uncharacterized protein OS=Bacte... 35 2.9 tr|A2FVQ8|A2FVQ8_TRIVA Putative uncharacterized protein OS=Trich... 35 2.9 tr|Q2TB00|Q2TB00_HUMAN FRMD4B protein (Fragment) OS=Homo sapiens... 35 2.9 tr|Q9NG19|Q9NG19_CRAGI Metallothionein OS=Crassostrea gigas GN=m... 35 3.8 tr|B0E7I5|B0E7I5_ENTDI Putative uncharacterized protein OS=Entam... 34 5.0 tr|Q661N9|Q661N9_BORGA Mg2+ transport protein OS=Borrelia garini... 34 6.5 tr|Q0SND3|Q0SND3_BORAP Mg2+ transport protein OS=Borrelia afzeli... 34 6.5 tr|O50166|O50166_BORBU Mg2+ transport protein (MgtE) OS=Borrelia... 34 6.5 tr|P94251|P94251_BORBU Magnesium ion transporter MgtE OS=Borreli... 34 6.5 tr|B7XUW1|B7XUW1_BORGA Magnesium transporter OS=Borrelia garinii... 34 6.5 tr|B7XT49|B7XT49_BORGA Magnesium transporter OS=Borrelia garinii... 34 6.5 tr|B7J1V2|B7J1V2_BORBU Magnesium transporter OS=Borrelia burgdor... 34 6.5 tr|B4DHD5|B4DHD5_HUMAN cDNA FLJ57979, highly similar to FERM dom... 34 6.5 tr|B0M0M2|B0M0M2_CAEEL Uncoordinated protein 82, isoform b OS=Ca... 33 8.5 tr|B0M0M1|B0M0M1_CAEEL Uncoordinated protein 82, isoform a OS=Ca... 33 8.5
>tr|B7AWZ5|B7AWZ5_9BACE Putative uncharacterized protein OS=Bacteroides pectinophilus ATCC 43243 GN=BACPEC_03245 PE=4 SV=1 Length = 153
Score = 35.0 bits (79), Expect = 2.9 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -2
Query: 559 DLSDIFLDGLTEMQLSEEAPIGYLAQQWLVAAKKVAFETMKCKDYKTKNENAAKDFADAE 380 +L+D+ L E +L++E +A + ++ +KK+ KD +T + K+ A+A Sbjct: 48 NLNDLKLTKAHEAKLAKEELDAAIALKEVIESKKIVLSIKGGKDGRTFGSVSGKEIAEAA 107
Query: 379 LEQMVAEID-LRVAIDEEKKLA 317 EQ E+D ++ IDE ++A Sbjct: 108 KEQAGLELDKKKIKIDEPIRMA 129
>tr|A2FVQ8|A2FVQ8_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_479180 PE=4 SV=1 Length = 1297
Score = 35.0 bits (79), Expect = 2.9 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = -2
Query: 460 KVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFAK 281 KV+ + K ++ K +N+N + FA+A+ E + + + L + E+K++ ++ D K Sbjct: 541 KVSELSQKLENEKLENKNLTEKFAEAKSESLASVLQLNQSQSEKKQIEKEISDYHKKIEK 600
Query: 280 EL 275 E+ Sbjct: 601 EI 602
>tr|Q2TB00|Q2TB00_HUMAN FRMD4B protein (Fragment) OS=Homo sapiens GN=FRMD4B PE=2 SV=1 Length = 546
Score = 35.0 bits (79), Expect = 2.9 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Frame = -2
Query: 511 EEAPIGYLAQQWLV-AAKKVAFETMKCKDYKTKNENAAKDFADA-----ELEQMVAEIDL 350 +E +L QQ LV AAKK+A E CK K K + +D+ DA E+E + E + Sbjct: 13 QELESNFLIQQKLVEAAKKLANEPDLCKTVKKKRK---QDYTDAMKKLQEIENAINEYRI 69
Query: 349 RVAIDEEKKLALQLEDLQANFAKELSSNPT 260 R +K + ED+ + + LS T Sbjct: 70 RCGKKPSQKATVLPEDIIPSESSSLSDTTT 99
>tr|Q9NG19|Q9NG19_CRAGI Metallothionein OS=Crassostrea gigas GN=mt PE=4 SV=1 Length = 107
Score = 34.7 bits (78), Expect = 3.8 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Frame = -1
Query: 491 SCPTMACGCQEGSF*NNEMQGLQDKE*KRCKGLCGCGVGANGSRN*L---ESGY**REKT 321 SCP C C G + + K C G CGCG G G N +SG + K Sbjct: 18 SCPATGCKCGPGCKCGDGCKCSGCKVKCNCSGSCGCGKGCTGPENCKCANDSGCGCKVKC 77
Query: 320 STSAGGLAGKFCQG 279 + S GK C G Sbjct: 78 NCSGSCGCGKGCTG 91
>tr|B0E7I5|B0E7I5_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760 GN=EDI_349420 PE=4 SV=1 Length = 1279
Score = 34.3 bits (77), Expect = 5.0 Identities = 14/37 (37%), Positives = 25/37 (67%) Frame = -1
Query: 146 MMLLEYLVNSCREQGLYGVPNRSRDKKVQALAQITIN 36 MML+EY +N G++ +PN S + K++AL+ + I+ Sbjct: 547 MMLIEYYINMNYLDGIFNIPNISTELKLKALSAVAID 583
>tr|Q661N9|Q661N9_BORGA Mg2+ transport protein OS=Borrelia garinii GN=mgtE PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.5 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -2
Query: 463 KKVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFA 284 KK+A ET D TKN+ A F + E+ +M+ E++L ID LE++ AN Sbjct: 52 KKIAVETFSNFDQSTKNK-LANSFTNKEISEMIDELNLDDVID-------LLEEVPANVV 103
Query: 283 KELSSNPT 260 + ++ T Sbjct: 104 QRFLASST 111
>tr|Q0SND3|Q0SND3_BORAP Mg2+ transport protein OS=Borrelia afzelii (strain PKo) GN=mgtE PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.5 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -2
Query: 463 KKVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFA 284 KK+A ET D TKN+ A F + E+ +M+ E++L ID LE++ AN Sbjct: 52 KKIAVETFSNFDQSTKNK-LANSFTNKEISEMIDELNLDDVID-------LLEEVPANVV 103
Query: 283 KELSSNPT 260 + ++ T Sbjct: 104 QRFLASST 111
>tr|O50166|O50166_BORBU Mg2+ transport protein (MgtE) OS=Borrelia burgdorferi GN=BB_0380 PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.5 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -2
Query: 463 KKVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFA 284 KK+A ET D TKN+ A F + E+ +M+ E++L ID LE++ AN Sbjct: 52 KKIAVETFSNFDQSTKNK-LANSFTNKEISEMIDELNLDDVID-------LLEEVPANVV 103
Query: 283 KELSSNPT 260 + ++ T Sbjct: 104 QRFLASST 111
>tr|P94251|P94251_BORBU Magnesium ion transporter MgtE OS=Borrelia burgdorferi GN=mgtE PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.5 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -2
Query: 463 KKVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFA 284 KK+A ET D TKN+ A F + E+ +M+ E++L ID LE++ AN Sbjct: 52 KKIAVETFSNFDQSTKNK-LANSFTNKEISEMIDELNLDDVID-------LLEEVPANVV 103
Query: 283 KELSSNPT 260 + ++ T Sbjct: 104 QRFLASST 111
>tr|B7XUW1|B7XUW1_BORGA Magnesium transporter OS=Borrelia garinii Far04 GN=mgtE PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.5 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -2
Query: 463 KKVAFETMKCKDYKTKNENAAKDFADAELEQMVAEIDLRVAIDEEKKLALQLEDLQANFA 284 KK+A ET D TKN+ A F + E+ +M+ E++L ID LE++ AN Sbjct: 52 KKIAVETFSNFDQSTKNK-LANSFTNKEISEMIDELNLDDVID-------LLEEVPANVV 103
Query: 283 KELSSNPT 260 + ++ T Sbjct: 104 QRFLASST 111
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