BP914460
Clone id YMU001_000059_B08
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACGTGGACAGAAAGTCATTGCTTGCTGGGTGTCTCAACTTGAATTTCCAATACATCAATG
CCCTATCAAAGATGTTCGTGGGTGTCAAGCAGACCCTATTCTTCAAGTTCATCAGCTCCA
TACAAGCTATATAGCTCTACGCCGGTATTGACATCAGCACTACTTTTTGAAAATACGATT
CATCCTAGTCTTTCAAACAATATCCTACCATGCCTTTGAATGTGTGCATCTTGTGTTGTT
TCAACCCACGACACAAAACCATTCCCCCTGCGAGGCGTCGACTTAGCCCAACCCAAGTAT
GCTTTTATTTTCTTCTTGTTCACAACAATCAATGATGTTGCCCAAAGCCAGACAACCATT
TGCAAATGAAGATGCAAAAGCGCTCCTCCTCTTTCCAATGCGCACAAGCCATCTAGCGTC
TCCCTTTCAAGAAACAACTTCATGCAGCCCAGCAGGCCTATCTCTACATCATCAGCACCC
CTGAGACATAGTAACACTAACTTCCATCACTCTGGCCTCTGGCTTCCTTGCTTTTGATGA
G
■■Homology search results ■■ -
sp_hit_id Q1QY40
Definition sp|Q1QY40|ACCD_CHRSD Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)
Align length 50
Score (bit) 30.4
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914460|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B08.
(541 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1QY40|ACCD_CHRSD Acetyl-coenzyme A carboxylase carboxyl tran... 30 5.7
sp|Q64GL0|EVL_XENLA Ena/VASP-like protein OS=Xenopus laevis GN=e... 30 7.6
sp|Q62668|UT2_RAT Urea transporter, kidney OS=Rattus norvegicus ... 30 9.8
sp|Q9KTA3|ACCD_VIBCH Acetyl-coenzyme A carboxylase carboxyl tran... 30 9.8
sp|A5F2T5|ACCD_VIBC3 Acetyl-coenzyme A carboxylase carboxyl tran... 30 9.8
sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2 30 9.9

>sp|Q1QY40|ACCD_CHRSD Acetyl-coenzyme A carboxylase carboxyl
transferase subunit beta OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=accD
PE=3 SV=1
Length = 310

Score = 30.4 bits (67), Expect = 5.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3

Query: 249 RHKTIPPARRRLSPT-QVCFYFLLVHNNQ*CCPKPDNHLQMKMQKRSSSF 395
R K++P R P + Y + +Q CPK D+HL++ +KR + F
Sbjct: 19 RRKSVPDGLWRKCPNCEAVLYLPELERHQSVCPKCDHHLRLTARKRLNWF 68


>sp|Q64GL0|EVL_XENLA Ena/VASP-like protein OS=Xenopus laevis GN=evl
PE=2 SV=1
Length = 692

Score = 30.0 bits (66), Expect = 7.6
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Frame = +1

Query: 292 PKYAFIFFLFTTINDVAQSQTTICK*RCKSAPPLSNAHKPSSVSLSRNNFMQPSRP---- 459
P YA + +++ T R P L N+H S S S+++ P RP
Sbjct: 198 PSYAKVISSAAASPELSSKSTNKSSNRTSEPPELQNSHCGSEPSTSQSSAFSPIRPSNGT 257

Query: 460 ---------ISTSSAPLRHSNTNFHHS 513
+S AP HS + H S
Sbjct: 258 VSRSIKQISLSPPPAPGSHSPLSLHQS 284


>sp|Q62668|UT2_RAT Urea transporter, kidney OS=Rattus norvegicus
GN=Slc14a2 PE=1 SV=2
Length = 929

Score = 29.6 bits (65), Expect = 9.8
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -3

Query: 494 LLCLRGADDVEIGLLGCMKLFLERETLD-GLCALERGGALLHLHLQMVVWLWATSLIVVN 318
L+CL A IG+L + + +++ GLC A + + V W T L+ +
Sbjct: 786 LICLHAAIGSTIGMLAALSIATPFDSIYFGLCGFNSTLACIAIGGMFYVITWQTHLLAIA 845

Query: 317 KKKIKAYLGWA 285
AYLG A
Sbjct: 846 CALFAAYLGAA 856


>sp|Q9KTA3|ACCD_VIBCH Acetyl-coenzyme A carboxylase carboxyl
transferase subunit beta OS=Vibrio cholerae GN=accD PE=3
SV=1
Length = 308

Score = 29.6 bits (65), Expect = 9.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3

Query: 294 QVCFYFLLVHNNQ*CCPKPDNHLQMKMQKRSSSF 395
QV +Y L N + CPK D+H++MK ++R +F
Sbjct: 34 QVLYYAELERNLE-VCPKCDHHMRMKARRRLETF 66


>sp|A5F2T5|ACCD_VIBC3 Acetyl-coenzyme A carboxylase carboxyl
transferase subunit beta OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=accD PE=3 SV=1
Length = 308

Score = 29.6 bits (65), Expect = 9.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3

Query: 294 QVCFYFLLVHNNQ*CCPKPDNHLQMKMQKRSSSF 395
QV +Y L N + CPK D+H++MK ++R +F
Sbjct: 34 QVLYYAELERNLE-VCPKCDHHMRMKARRRLETF 66


>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2
Length = 2769

Score = 29.6 bits (65), Expect = 9.9
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = +1

Query: 385 PPLSNAHKP------SSVSLSRNNFMQPSRPISTSSAPLRHS 492
PPLS+AH P S SL+R NF S P S AP HS
Sbjct: 181 PPLSHAHTPNQHHAASINSLNRGNFTPRSNP---SPAPTDHS 219


tr_hit_id A4Q7L0
Definition tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula
Align length 72
Score (bit) 34.7
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914460|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B08.
(541 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula GN=MtrDRAFT_AC... 35 3.3
tr|B5YMD1|B5YMD1_THAPS Predicted protein OS=Thalassiosira pseudo... 34 5.7
tr|B0DHE3|B0DHE3_LACBS Predicted protein OS=Laccaria bicolor (st... 34 5.7
tr|A2QE11|A2QE11_ASPNC Remark: S. cerevisiae cells expressing Tp... 34 5.7
tr|A2FU95|A2FU95_TRIVA Putative uncharacterized protein OS=Trich... 33 7.4
tr|Q9W692|Q9W692_ACITR Proorphanin OS=Acipenser transmontanus PE... 33 9.5
tr|B3SP85|B3SP85_PIG Gamma-interferon-inducible-lysosomal thiol ... 33 9.5
tr|A6QPN6|A6QPN6_BOVIN IFI30 protein OS=Bos taurus GN=IFI30 PE=2... 33 9.5
tr|B6KHY9|B6KHY9_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.7

>tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula
GN=MtrDRAFT_AC182813g12v2 PE=4 SV=1
Length = 388

Score = 34.7 bits (78), Expect = 3.3
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2

Query: 23 CWVSQLEFPIHQCPIKDVRGCQADPILQVHQLHTSYIALRR----Y*HQHYFLKIRFILV 190
CW ++ FP+H + Q + L + QL ++ LR Y + F I F+L+
Sbjct: 147 CW-TEFPFPLHNADCS-LSNSQREHALAIEQLVPEFVTLRMNLCSYMNVEKFWMIYFLLI 204

Query: 191 FQTISYHAFECV 226
++ H FEC+
Sbjct: 205 LPRLNQHDFECL 216


>tr|B5YMD1|B5YMD1_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPS_23374 PE=4 SV=1
Length = 353

Score = 33.9 bits (76), Expect = 5.7
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1

Query: 334 DVAQSQTTICK*RCKSAPPLSNAHKPSSVSLSRNNFMQ---PSRPISTSSAPL-RHS 492
++ +S T R SAPP++ H S LSR++F PS ++T++ P+ RH+
Sbjct: 278 NIGRSSTAGVNTRSNSAPPINPVHNTSGNGLSRHSFSSAALPSSSLNTNATPITRHT 334


>tr|B0DHE3|B0DHE3_LACBS Predicted protein OS=Laccaria bicolor (strain
S238N-H82) GN=LACBIDRAFT_329213 PE=4 SV=1
Length = 2266

Score = 33.9 bits (76), Expect = 5.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1

Query: 382 APPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRHSNTN 501
APP KP S+S+S + RP + S+AP R ++TN
Sbjct: 1956 APPPVTVTKPGSLSMSNPEQLSRERPKAASAAPTRRTDTN 1995


>tr|A2QE11|A2QE11_ASPNC Remark: S. cerevisiae cells expressing Tpo1
become resistant to polyamine toxicity OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=An02g08970
PE=4 SV=1
Length = 646

Score = 33.9 bits (76), Expect = 5.7
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +1

Query: 151 TSALLFENTIHPSLSNNILPCL*MCASCV--VSTHDTKPFPLRGVDLAQPKYAFIFFLFT 324
++A + P + I+ L +C+S + + + T+PF + P + F+F+
Sbjct: 457 STATAYAMECFPGVGGEIVVILAICSSIINFIISETTQPF----YEATGPGWLFLFYGIC 512

Query: 325 TINDVAQSQTTIC---K*RCKSAPPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRH 489
I +A K R KS+PP ++ P ++ PS+P +S +P H
Sbjct: 513 VIISLAAGMAVYIWGKKWRRKSSPPTHPSNSPPLPQPPPSSPSPPSKPTQSSPSPPPH 570


>tr|A2FU95|A2FU95_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_472680 PE=4 SV=1
Length = 195

Score = 33.5 bits (75), Expect = 7.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2

Query: 206 YHAFECVHLVLFQPTTQNHSPCEAST*PNPSMLLFS-SCSQQSMMLPKARQPFANEDAKA 382
Y+AF +++ + +QN + AS PN M LFS C +Q + + ++DA
Sbjct: 84 YNAFHEMYINVRNDESQNKNVVFASKVPNDRMSLFSIECKEQGNLHQRDEFFLKSDDANC 143

Query: 383 LLLFPMRTSHLASPFQETTSCS 448
L H P+ +CS
Sbjct: 144 YLYTTFNAEHPEMPYAFLVNCS 165


>tr|Q9W692|Q9W692_ACITR Proorphanin OS=Acipenser transmontanus PE=2
SV=2
Length = 194

Score = 33.1 bits (74), Expect = 9.5
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3

Query: 506 WKLVLLCL--RGADDVEIGLLGCMKLFLERETLDGL-CALERGG 384
W L+LLCL G D ++ L C + + +T + L C +ERGG
Sbjct: 6 WTLLLLCLCVPGRSDCQMDCLSCSQRLFQHDTFNTLVCIVERGG 49


>tr|B3SP85|B3SP85_PIG Gamma-interferon-inducible-lysosomal thiol
reductase OS=Sus scrofa PE=2 SV=1
Length = 246

Score = 33.1 bits (74), Expect = 9.5
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = -3

Query: 500 LVLLCLRGADDVEIGLLGCMKLFLERETLDGL--CAL-ERGGALLHLHLQM 357
L ++C+ DD+E L C++++ + + D + CA+ +RG LLH++ Q+
Sbjct: 140 LTIVCIEELDDMEKNLEPCLQIYAPKVSPDSIMECAMGDRGMQLLHINAQL 190


>tr|A6QPN6|A6QPN6_BOVIN IFI30 protein OS=Bos taurus GN=IFI30 PE=2
SV=1
Length = 244

Score = 33.1 bits (74), Expect = 9.5
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = -3

Query: 500 LVLLCLRGADDVEIGLLGCMKLFLERETLDGL--CAL-ERGGALLHLHLQM 357
L ++CL DD+E L C++++ + + D + CA RG LLH++ Q+
Sbjct: 138 LTIVCLEEMDDMEQNLKPCLQIYAPKVSADSIMECATGNRGMQLLHINAQL 188


>tr|B6KHY9|B6KHY9_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_003520 PE=4 SV=1
Length = 2079

Score = 33.1 bits (74), Expect = 9.7
Identities = 29/104 (27%), Positives = 42/104 (40%)
Frame = +1

Query: 184 PSLSNNILPCL*MCASCVVSTHDTKPFPLRGVDLAQPKYAFIFFLFTTINDVAQSQTTIC 363
P LS +LPC S S+ + PFP R + F+F +T + + +T C
Sbjct: 35 PRLSPLVLPC-----SSESSSEWSAPFPRRHSKMP----TFVFSKNSTSSFLTSLKTRAC 85

Query: 364 K*RCKSAPPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRHSN 495
K SAPP+ N SS + P +S P H +
Sbjct: 86 KTYSPSAPPVGNLADTSSQTNDGAVSSSPPAGLSHCCTPAVHQS 129