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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914443
Clone id YMU001_000059_A02
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATATTACCTGCAGGTACTCACAACTCTGCTTTCCCGGACACGAAGTCCTTACTTGGGAA
TCCCAACTTCCATATCACAACTTGAGAGACTACCTCTCTCCGATCCATGGATCTACTTCC
CAAACTCGGGTACGAAACCCTTGGGCTGATCTGGCTCTAGTTCCTCAGAGCGCTTTTCTC
CTGCAGAGGCTCATGCCTTCCTCTGCTCCTACTCCCTCACGAAGAGGAAGTACACCTGCA
ATCAAATACTCAAAGATCAGAACATGAAAATCGTTACCTTCAAAGTCTCGACGCTCGAAA
CGCAACTCGATTCTCGAAAAGCAATTCCTCAGAAGAGATCTCTCCATAGAAAATCCTCTC
TTCCAATCCTACACACAAAAGAGGTGTGTTCTCTCGTAAATCAGCCCCGTCTACGACATT
TATGGGCTGAAAACAGAGAAAAACAGCAACTTGTCGCGATGGAAACACGCTTCGTAGGCA
CTTCTTCGCCAGCGAACTCGCGCACTGGGTCTTTGCGACATCTGGTACA
■■Homology search results ■■ -
sp_hit_id P48725
Definition sp|P48725|PCNT_MOUSE Pericentrin OS=Mus musculus
Align length 134
Score (bit) 35.4
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914443|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A02.
         (529 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48725|PCNT_MOUSE Pericentrin OS=Mus musculus GN=Pcnt PE=2 SV=1     35   0.17 
sp|A6LFD0|DDL_PARD8 D-alanine--D-alanine ligase OS=Parabacteroid...    31   3.2  
sp|Q8PET9|UXAC_XANAC Uronate isomerase OS=Xanthomonas axonopodis...    31   4.2  
sp|Q32LD3|LYPD4_BOVIN Ly6/PLAUR domain-containing protein 4 OS=B...    30   7.1  
sp|Q7VKB3|HSLU_HAEDU ATP-dependent hsl protease ATP-binding subu...    30   7.1  
sp|Q55FT5|COG4_DICDI Conserved oligomeric Golgi complex subunit ...    30   7.1  
sp|Q9AM27|UXAC_XANOR Uronate isomerase OS=Xanthomonas oryzae pv....    30   7.2  
sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein ...    30   9.2  
sp|P18168|SERR_DROME Serrate protein OS=Drosophila melanogaster ...    30   9.4  
sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogas...    30   9.4  

>sp|P48725|PCNT_MOUSE Pericentrin OS=Mus musculus GN=Pcnt PE=2 SV=1
          Length = 1920

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 5/134 (3%)
 Frame = +3

Query: 66   TSISQLERLPLSDPWIYFPNSGTKPLXXXXXXXXERFSPAEAHAFLCSYSLTKRKYT--C 239
            TS ++L   PL D W    + G   +        E  S  E  + +C     + + T  C
Sbjct: 971  TSDARLAAAPLGDMW---SDEGLLEIDRTLPEGAETSSVCEISSHVCESFFIRPENTLDC 1027

Query: 240  NQILKDQNMKIVTFKVSTLETQLDSRKAIPQKRSLHRKSSLPILHTKEVCSLVNQPR--- 410
             Q ++     + T     LE  LDS K + + R LHR       H  E  +   Q +   
Sbjct: 1028 EQPIRRVYQSLSTAVEGLLEMALDSSKQLEEARQLHRCVEREFRHRNEEMAQAMQKQQEL 1087

Query: 411  LRHLWAENREKQQL 452
            L  L  E+  K +L
Sbjct: 1088 LERLREESAAKDRL 1101


>sp|A6LFD0|DDL_PARD8 D-alanine--D-alanine ligase OS=Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
           GN=ddl PE=3 SV=1
          Length = 330

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +3

Query: 213 SLTKRKYTCNQILKDQNMKIVT----FKVSTL-ETQLDSRKAIP-QKRSLHRKSSLPILH 374
           +LT  KY CN  LKD  +KI      FK  T+ + ++ +R  +P   +     SS  +  
Sbjct: 112 ALTFNKYVCNHYLKDFGVKIAASIHLFKGETITDEEVVTRLGLPIFVKPNDGGSSFGVTK 171

Query: 375 TKEVCSLVNQPRLRHLWAENRE 440
            KEV ++  QP +   + E RE
Sbjct: 172 VKEVSAI--QPAIAKAFGEGRE 191


>sp|Q8PET9|UXAC_XANAC Uronate isomerase OS=Xanthomonas axonopodis
           pv. citri GN=uxaC PE=3 SV=1
          Length = 472

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +1

Query: 37  GHEVLTWESQLPYHNLRDYLSPIHGSTSQTRVRNPWADLALVPQSAFLLQRLMPSSAPTP 216
           G +VLTW+  L  H  R      HG+TS        A   L P  A  L   +   A TP
Sbjct: 222 GEDVLTWDGYLRAHRQRRAFFAAHGATSTDHGHPSAATADLSPAEAQRLFDTVVRGAATP 281

Query: 217 SR 222
            +
Sbjct: 282 EQ 283


>sp|Q32LD3|LYPD4_BOVIN Ly6/PLAUR domain-containing protein 4 OS=Bos
           taurus GN=LYPD4 PE=2 SV=1
          Length = 246

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +3

Query: 201 LCSYSLTKRKYTCNQILKDQNMK-IVTFKVSTLETQLDSRKAIPQKRSLHRKSSLPILHT 377
           + SYS   R Y CN +    NM  I+  K  T +T   S  + P     H KS LP   +
Sbjct: 103 IASYSRVCRTYLCNNLT---NMNAILHLKARTPKTLKSSSHSCPTCVGEHSKSCLPNFVS 159

Query: 378 KEVC 389
            E C
Sbjct: 160 SESC 163


>sp|Q7VKB3|HSLU_HAEDU ATP-dependent hsl protease ATP-binding subunit
           hslU OS=Haemophilus ducreyi GN=hslU PE=3 SV=2
          Length = 440

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
 Frame = +3

Query: 243 QILKDQNMKIVTFKVSTLETQLDSRKAIPQKRSLHRKSSLPILHTKEVCSLVNQPRLRHL 422
           +I+    M+ +T ++ +L   +   K   QKR +  K +L ++  +E   LVNQ  L+  
Sbjct: 182 EIMTPPGMEEMTSQLQSLFEGMSPNKT--QKRKMKIKDALKVMLDEEAAKLVNQEELKQQ 239

Query: 423 WAENREKQQLVAME-----TRFVGTSSPANSRTGSLRHLV 527
             E  E+  +V ++      +  G S    SR G  R L+
Sbjct: 240 AIEAVEQHGIVFIDEIDKICKKSGNSGGDVSREGVQRDLL 279


>sp|Q55FT5|COG4_DICDI Conserved oligomeric Golgi complex subunit 4
           OS=Dictyostelium discoideum GN=cog4 PE=3 SV=1
          Length = 911

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 332 LRNCFSRIELRFERRDFEGNDFHVLIFEYLIAGVLPLREGVGAEEGMSLCRRKAL 168
           L+NC   +++  E+ D+EG  FH+  +  +   VL       + E +S+  +K L
Sbjct: 114 LKNCIEGVQISIEKEDYEGAAFHINRYLSIDKSVLE----DNSSEKLSIAEKKLL 164


>sp|Q9AM27|UXAC_XANOR Uronate isomerase OS=Xanthomonas oryzae pv.
           oryzae GN=uxaC PE=3 SV=2
          Length = 472

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/62 (32%), Positives = 24/62 (38%)
 Frame = +1

Query: 37  GHEVLTWESQLPYHNLRDYLSPIHGSTSQTRVRNPWADLALVPQSAFLLQRLMPSSAPTP 216
           G +VLTW   L  H  R      HG+TS        A   L P  A  L   +   A TP
Sbjct: 222 GEDVLTWNGYLRAHRQRRAFFAAHGATSTDHGHPSAATADLSPAQAQRLFDTVVRGAATP 281

Query: 217 SR 222
            +
Sbjct: 282 EQ 283


>sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein 1
           OS=Candida glabrata GN=AMN1 PE=3 SV=1
          Length = 511

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = +3

Query: 234 TCNQILKDQNMKIVTFKVSTLET----QLDSRKAIPQKRSLHRKSSLPILHTKEVCSLVN 401
           T N++ K   M+ + F  ST  T    Q  ++K  PQ   LH+ S +   +++ +  +++
Sbjct: 218 TWNKVSKGYLMRDLKFTKSTSLTNFLSQCSTKKTTPQSLILHKMSDINNNNSRGLEIIID 277

Query: 402 QPRLRHL 422
             +LRHL
Sbjct: 278 PKQLRHL 284


>sp|P18168|SERR_DROME Serrate protein OS=Drosophila melanogaster
            GN=Ser PE=1 SV=3
          Length = 1404

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = +1

Query: 79   NLRDYLSPIHGSTSQTRVR-------NPWADLALVPQSAFLLQRLMPSSAPTPSRR 225
            NLR Y +P+ GSTS  R         NP  +LA    S+  L R  P   P    R
Sbjct: 1278 NLRRYTNPLKGSTSSLRAATGMELSLNPAPELAASAASSSALHRSQPLFPPCDFER 1333


>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster
           GN=Hmx PE=2 SV=3
          Length = 592

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  RYSQLCFPGHEVLTWESQ-LPYHNLRDYLSPIHGSTSQTRVRNPWADLALVPQS 171
           RY+ LC PG     W  Q LP+H      SP H S+S     NP +  ++ P +
Sbjct: 290 RYAALCPPGWP---WAPQRLPFH------SPTHDSSSTNTTENPPSPTSMSPNN 334
tr_hit_id Q4L785
Definition tr|Q4L785|Q4L785_STAHJ Similar to DNA translocase stage III sporulation protein OS=Staphylococcus haemolyticus (strain JCSC1435)
Align length 75
Score (bit) 35.0
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914443|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A02.
         (529 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4L785|Q4L785_STAHJ Similar to DNA translocase stage III spor...    35   2.4  
tr|A4I9D9|A4I9D9_LEIIN Putative uncharacterized protein OS=Leish...    33   6.7  
tr|A8BMK9|A8BMK9_9ROSA Kinase-like protein (Fragment) OS=Prunus ...    33   8.8  
tr|Q4JV41|Q4JV41_CORJK Putative uncharacterized protein OS=Coryn...    33   9.0  

>tr|Q4L785|Q4L785_STAHJ Similar to DNA translocase stage III
           sporulation protein OS=Staphylococcus haemolyticus
           (strain JCSC1435) GN=SH1181 PE=4 SV=1
          Length = 1297

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
 Frame = +2

Query: 245 NTQRSEHENRYLQSLDARNATRFSKSNS---------SEEISP*KILSSNPTHKRGVFSR 397
           +T+ S+  N++  +  + N + +SK+NS         SE       LSS PT+ R  F  
Sbjct: 147 DTRESQRFNKHQNNYSSTNVSNYSKANSNHQSRVKLQSERFKSNYHLSSEPTYHRSSFKT 206

Query: 398 KSAPSTTFMG*KQRK 442
              PS  F G K+R+
Sbjct: 207 SEVPSAIF-GTKKRR 220


>tr|A4I9D9|A4I9D9_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ33.2770 PE=4 SV=1
          Length = 1577

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 21/95 (22%), Positives = 39/95 (41%)
 Frame = +3

Query: 123 NSGTKPLXXXXXXXXERFSPAEAHAFLCSYSLTKRKYTCNQILKDQNMKIVTFKVSTLET 302
           NSG   +          F      AF+ + SL+    TC   L   +  ++ F V  +  
Sbjct: 536 NSGESKMHTVTSSISNGFLGGHRPAFVTTASLS----TCPAALVPDHAPLLAFGVHPIRK 591

Query: 303 QLDSRKAIPQKRSLHRKSSLPILHTKEVCSLVNQP 407
            +DSR  +P   +    +++P+L + +  +   QP
Sbjct: 592 DVDSRSCVPSPAASTASTAMPLLLSPQALATAGQP 626


>tr|A8BMK9|A8BMK9_9ROSA Kinase-like protein (Fragment) OS=Prunus
           cerasus var. caproniana PE=4 SV=1
          Length = 168

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -3

Query: 359 RGFSMERSLLRNCFSR----IELRFERRDFEGNDFHVLIFEYLIAGVL 228
           + F  E   LRN   R    I   F   DF+GNDF  LI+EY+  G L
Sbjct: 24  KSFVAECEALRNIRHRNLVKILTAFSSLDFQGNDFEALIYEYMPNGSL 71


>tr|Q4JV41|Q4JV41_CORJK Putative uncharacterized protein
           OS=Corynebacterium jeikeium (strain K411) GN=jk1152 PE=4
           SV=1
          Length = 347

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 37  GHEVLTWESQLPYHNLRDYLSPIHGSTSQTRVRNPWADLALVPQSAFLLQRLMP 198
           G +V  W      H L D  SP+H S +   + +PW  L   P   F++ R++P
Sbjct: 144 GLDVTMWA-----HRLFDAGSPLHNSIAAIVLNSPWFGLQFNPAVRFVINRVLP 192