BP914442
Clone id YMU001_000059_A01
Library
Length 602
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTGCCGCGGGCACGA
CAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCCCTC
AATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGC
TCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACGTACTACCGCCCCAGGTG
GCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAACTCTTGGGGAAGATC
AGCCTGTTATCCTTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGAACCG
TCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACTGGTAGGTCTCGCAGTCAAGCTCC
CTTCTGCCTTTGCACTCGTAGGCTGATTTCCGTCCAGCCTGAGGAAACCTTTGCGCGCCT
CCGTTACTCTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGGGACTGTCTCTTGG
TCCGTAATTCTTGACACAAGGTTAGAATTCTAGTTCTTCTAGAGTGGTATCTCACTGATG
GC
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 80
Score (bit) 91.3
E-value 3.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914442|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A01.
(602 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 91 3e-18
sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal regio... 35 0.38
sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia herm... 33 1.1
sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laev... 31 5.5
sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans (s... 30 7.2
sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ... 30 9.4
sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos tauru... 30 9.4
sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolytic... 30 9.4

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
muridarum GN=TC_0114 PE=4 SV=2
Length = 122

Score = 91.3 bits (225), Expect = 3e-18
Identities = 46/80 (57%), Positives = 49/80 (61%)
Frame = +1

Query: 130 APAPDMDRTVSRRSEPSSRTALMGEQPNPWDVLPPQVAKSRHRGAKPSRRCXXXXXXXXX 309
AP D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAKP RR
Sbjct: 43 APTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLL 102

Query: 310 XXXXXXXXXRRPFHLEPSDH 369
RR FH P DH
Sbjct: 103 SPEYLLSVKRRRFHFPPPDH 122


>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region
16 protein homolog OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461

Score = 34.7 bits (78), Expect = 0.38
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -1

Query: 137 AGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGAD 18
A ARALRGP P P R H W + R+R +R A+ AD
Sbjct: 3 AAARALRGPRPRWPTPAREH-WTPAGRSRSRREAAEAEAD 41


>sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii
GN=vlp18 PE=3 SV=1
Length = 360

Score = 33.1 bits (74), Expect = 1.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2

Query: 454 DGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVA 335
+G+Q A A+G+ TA ++ GTK LS+ P AVA
Sbjct: 250 EGDQALGAAADGTTTAMSFAKGGTKDNLSNANTPKAAAVA 289


>sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laevis
GN=clasp1 PE=2 SV=1
Length = 1468

Score = 30.8 bits (68), Expect = 5.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2

Query: 457 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRA 341
+DGN+P+SA + S A T+R G +G + PS A
Sbjct: 247 VDGNRPSSASSSASSKAPQTARRGVSLGTARRPGPSSAA 285


>sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans
(strain Agy99) GN=lexA PE=3 SV=1
Length = 244

Score = 30.4 bits (67), Expect = 7.2
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -2

Query: 499 ASQRVTEARKGFLRLDGNQPTSAKAEG---SLTARPTSRAGTKVGLSDPT 359
A Q T RKG+LR D N+P + G ++TA P + L +PT
Sbjct: 74 AHQLRTLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALPEPT 123


>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia
pseudotsugata multicapsid polyhedrosis virus GN=ORF58
PE=4 SV=1
Length = 378

Score = 30.0 bits (66), Expect = 9.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2

Query: 259 LDVGSSPPGAVVRPKGWAVRPLKRYVSWVQN 167
L G +PPG ++ P V+ + RYV+W N
Sbjct: 279 LSYGGAPPGHLMCPPRAIVKKIYRYVNWASN 309


>sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos taurus
GN=SCYL1 PE=2 SV=1
Length = 807

Score = 30.0 bits (66), Expect = 9.4
Identities = 38/152 (25%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Frame = -1

Query: 542 DQETVPGRQFLWGVGLPKSNGGAQRFP----QAGRKSAYECKGRRELDC-ETYQXXXXXX 378
+ E+V ++ W G S G P Q S++E +G E D E
Sbjct: 655 EAESVLAQRDDWSTGNQASRAGQASNPGHRSQESDWSSWEAEGSWEQDWQEPSPPAPPPE 714

Query: 377 XXXXXXXSKWKGRRSTDKSYSKDNRLIFPKSSHRREGLAPRCRLFATWGGSTSQGLGCSP 198
W G +DK Y S HR G R +WG +GL
Sbjct: 715 GTRLASEYNWGGPEPSDKGYP-----FAALSVHREAGAQSRRD---SWGDDNWEGLETES 766

Query: 197 IKAVRELGSERRETVR---SISGAGARALRGP 111
+A EL ++RE R A +A +GP
Sbjct: 767 RQAKAELARKKREERRREMEAKRAEKKAAKGP 798


>sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=lexA PE=3 SV=1
Length = 275

Score = 30.0 bits (66), Expect = 9.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2

Query: 499 ASQRVTEARKGFLRLDGNQPTSAKAEGSLTARPTSRAG 386
A Q + RKGFLR D N+P + + + +A P + AG
Sbjct: 89 AHQLMVLQRKGFLRRDPNRPRAVEIRSAESAVPDASAG 126


tr_hit_id Q4EE25
Definition tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858
Align length 111
Score (bit) 180.0
E-value 5.0e-44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914442|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_A01.
(602 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 180 5e-44
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 179 1e-43
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil... 162 2e-38
tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin... 157 3e-37
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost... 148 2e-34
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost... 148 2e-34
tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen... 148 2e-34
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost... 148 2e-34
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost... 148 2e-34
tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost... 144 3e-33
tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen... 144 3e-33
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost... 144 4e-33
tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost... 143 7e-33
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost... 141 3e-32
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo... 141 3e-32
tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost... 139 1e-31
tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac... 135 2e-30
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep... 134 4e-30
tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep... 133 9e-30
tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep... 133 9e-30
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph... 131 3e-29
tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep... 131 3e-29
tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost... 127 6e-28
tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost... 127 6e-28
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac... 125 1e-27

>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria
monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1
Length = 112

Score = 180 bits (457), Expect = 5e-44
Identities = 89/111 (80%), Positives = 94/111 (84%)
Frame = -2

Query: 457 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHI 278
+DGN S KA+GSLTAR TSRAGTKVGLSDP VP GRA+AQRIK T ITG S PRVHI
Sbjct: 1 MDGNHSQSVKAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHI 60

Query: 277 DGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRALE 125
DG+VWHLDVGSS PGAVV PKGWAVRPLKR+ SWVQNVVRQFGPYP RA E
Sbjct: 61 DGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRAQE 111


>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4
SV=1
Length = 109

Score = 179 bits (454), Expect = 1e-43
Identities = 89/109 (81%), Positives = 91/109 (83%)
Frame = -2

Query: 457 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHI 278
+DGN P SAKAEGSLTA PT AGTKVGLSDP V SG A+AQRIK TL ITG S PRVHI
Sbjct: 1 MDGNHPKSAKAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHI 60

Query: 277 DGKVWHLDVGSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 131
DG VWHLDVGSS PGAVV PKGWAVRPLKRY SWVQNVVRQFGPYP A
Sbjct: 61 DGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109


>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus
megaterium PE=4 SV=1
Length = 95

Score = 162 bits (409), Expect = 2e-38
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = -2

Query: 415 LTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKVWHLDVGSSPP 236
+TAR TSRAGTKVGLSDP VP GRA+AQRIK T ITG S PRVHIDG+VWHLDVGSS P
Sbjct: 1 MTARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP 60

Query: 235 GAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYP 140
GAVV PKGWAVRPLKRY SWVQNVVRQFGPYP
Sbjct: 61 GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92


>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4
SV=1
Length = 108

Score = 157 bits (398), Expect = 3e-37
Identities = 79/100 (79%), Positives = 82/100 (82%)
Frame = -2

Query: 430 KAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLRITG*SSPRVHIDGKVWHLDV 251
++ GSLTA PT AGTKVGLSDP V SG A+AQRIK TL ITG S PRVHIDG VWHLDV
Sbjct: 9 QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68

Query: 250 GSSPPGAVVRPKGWAVRPLKRYVSWVQNVVRQFGPYPVRA 131
GSS PGAVV KGWAVRPLKRY SWVQNVVRQFGPYP A
Sbjct: 69 GSSHPGAVVGLKGWAVRPLKRYASWVQNVVRQFGPYPAWA 108


>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 2e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 2e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment)
OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4
SV=1
Length = 107

Score = 148 bits (374), Expect = 2e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
SV=1
Length = 210

Score = 148 bits (374), Expect = 2e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4
SV=1
Length = 213

Score = 148 bits (374), Expect = 2e-34
Identities = 72/98 (73%), Positives = 78/98 (79%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum NCTC 2916 GN=CBN_0042 PE=4 SV=1
Length = 218

Score = 144 bits (364), Expect = 3e-33
Identities = 71/98 (72%), Positives = 77/98 (78%)
Frame = +2

Query: 242 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 421
RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAP
Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCMCRSQAP 61

Query: 422 FCLCTRRLISVQPEETFARLRYSLGGLRPIETVYLGLS 535
FCLCT R IS + E TF RLRY LGG RP +T +L +S
Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYFLGGDRPSQTAHLTMS 99