BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914395|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D09.
         (492 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45537|YHFK_ECOLI Uncharacterized protein yhfK OS=Escherichia...    30   4.5  

>sp|P45537|YHFK_ECOLI Uncharacterized protein yhfK OS=Escherichia
           coli (strain K12) GN=yhfK PE=3 SV=2
          Length = 700

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 464 CNVS*LQSPHQAFKKEMRIGRDSHKASCSLISGLTL 357
           CN++ L +PH+ F K + IG  S  A+CSL++ L L
Sbjct: 51  CNIAGLDTPHKRFFKRLIIGA-SLFATCSLLTQLLL 85

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914395|Adiantum capillus-veneris mRNA, clone:
YMU001_000058_D09.
         (492 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1IZ35|Q1IZ35_DEIGD Aminoglycoside 3-N-acetyltransferase OS=D...    36   1.1  
tr|B3LAB7|B3LAB7_PLAKH DNA mismatch repair protein, Msh2p homolo...    33   9.3  
tr|B8CAQ5|B8CAQ5_THAPS Predicted protein OS=Thalassiosira pseudo...    33   9.5  

>tr|Q1IZ35|Q1IZ35_DEIGD Aminoglycoside 3-N-acetyltransferase
           OS=Deinococcus geothermalis (strain DSM 11300)
           GN=Dgeo_1202 PE=4 SV=1
          Length = 266

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 209 NLTIHYHTLVFMVHMVNTFPPIGHSVLSRTFSNCLADFG 325
           N TIHY      + ++  + P+G  V+S  F NC ADFG
Sbjct: 158 NTTIHYGEHTAGMPLLTRYVPLGGQVVSTAFPNCSADFG 196


>tr|B3LAB7|B3LAB7_PLAKH DNA mismatch repair protein, Msh2p
           homologue,putative OS=Plasmodium knowlesi (strain H)
           GN=PKH_132290 PE=4 SV=1
          Length = 810

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 383 MMLYGSPFQFSSPF*KLGGETAIMKRCRHALLLL 484
           ++ Y SPF +  P    GGE  IMK+ RH LL L
Sbjct: 500 VVCYNSPFPYVRPTVVEGGENVIMKKSRHPLLEL 533


>tr|B8CAQ5|B8CAQ5_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_24557 PE=4 SV=1
          Length = 672

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
 Frame = +1

Query: 199 WSSQLNNPLPHPGVYGPHGEHLPSNWPQRALTNI*QLPCRLWTPFSSKVHSVHSVRPLM- 375
           +S+  + P P P  Y     HLP NW                  +S++ H +HS +P   
Sbjct: 99  YSNPNDEPFPRPSKY--QNIHLPPNW------------------YSNQSHPLHSPKPKRS 138

Query: 376 --RLHDALWESLPILISFLKAWWGDCNYETLQAC 471
             + H  +  S   L   + A W   +YET Q C
Sbjct: 139 HKKSHGKI--SFLTLTKTISANWNSVDYETRQYC 170