BP914343
Clone id YMU001_000057_H02
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACCGGGAATACATTGCCATTCGCTGTTATGGGCACGTCCGAAACACGGAATGGAGATTGG
GAACGGGAAGTTGAAATGGGAACGAGGAAGCCTGAAAATGGCCATTCCTTGTGGTACACA
ACGCTGCAAATGCTTTACAAAACACAATACAAAAGTGGACATGATGTCTATGCATTGTTG
GTTCATAGGATAACCCAACAAGATTGCAAACACTGTTCAATCTCTCAATTCCCGGGGAAT
TCGAGTAGCGATCCTTGACCTACGCTCTCTTCTTGCAAACACTGTTTGATCTCTCAATTC
CCGGGGAATTCGAGTAGCGATCCTTGACCTTCCACCCTGCGGTGCTTCATCCAAGGAACC
TGGCAACGACCCAATGCGATCCGAATCACCTGTTGACTCCAAAGAAGAAAGTACGTTTGG
TGCAGAACTACGGAAGGAAGAGGGAGGCGTGAAGTACGGAGACGCACGGAATGCCTCCAT
CGAATCCGGATCAGTCAAAGAGTTCAAGGACAAATGCCTGGATGGACGCGGAGCTCTTAT
GGG
■■Homology search results ■■ -
sp_hit_id Q8CCC3
Definition sp|Q8CCC3|CL056_MOUSE Uncharacterized protein C12orf56 homolog OS=Mus musculus
Align length 46
Score (bit) 28.1
E-value 0.87
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914343|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H02.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CCC3|CL056_MOUSE Uncharacterized protein C12orf56 homolog O... 28 0.87
sp|Q62935|VWF_RAT von Willebrand factor (Fragment) OS=Rattus nor... 31 3.4
sp|P14300|DRAG_RHORU ADP-ribosyl-[dinitrogen reductase] glycohyd... 31 3.4
sp|Q9WTW1|GRIP2_RAT Glutamate receptor-interacting protein 2 OS=... 31 4.4
sp|Q8UIG9|NTPA_AGRT5 Nucleoside-triphosphatase OS=Agrobacterium ... 31 4.5
sp|P32945|PPQ1_YEAST Serine/threonine-protein phosphatase PPQ OS... 30 5.8
sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapien... 30 7.6
sp|O73741|COE2_XENLA Transcription factor COE2 OS=Xenopus laevis... 30 7.6
sp|O08792|COE2_MOUSE Transcription factor COE2 OS=Mus musculus G... 30 7.6
sp|Q9HAK2|COE2_HUMAN Transcription factor COE2 OS=Homo sapiens G... 30 7.6
sp|Q08DL5|COE2_BOVIN Transcription factor COE2 OS=Bos taurus GN=... 30 7.6
sp|Q8R0A6|VTM2A_MOUSE V-set and transmembrane domain-containing ... 30 9.9
sp|Q00106|VG65_ICHV1 Uncharacterized gene 65 protein OS=Ictaluri... 30 9.9

>sp|Q8CCC3|CL056_MOUSE Uncharacterized protein C12orf56 homolog
OS=Mus musculus PE=2 SV=1
Length = 530

Score = 28.1 bits (61), Expect(2) = 0.87
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2

Query: 314 VAILDLPPCGASSKEPGNDPMRSESPVDSKEESTFGAELRKEEGGV 451
+A D+P C S N+P P D+ E +F + + E G+
Sbjct: 108 MAATDMPVCSLSLASSTNEPQELPDPRDAPREGSFRLDGNQSEFGL 153



Score = 23.9 bits (50), Expect(2) = 0.87
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1

Query: 235 GNSSSDP*PTLSSCKHCLISQFP 303
G +S P PTLSSC+ + P
Sbjct: 92 GQGTSRPLPTLSSCQSMAATDMP 114


>sp|Q62935|VWF_RAT von Willebrand factor (Fragment) OS=Rattus
norvegicus GN=Vwf PE=2 SV=2
Length = 430

Score = 31.2 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1

Query: 453 FTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAPQGGRSR 322
F+P R APN++ + SD I LPG + P G SR
Sbjct: 365 FSPSQGDREQAPNLVYMVTGNPASDEIRRLPGDIQVVPIGVGSR 408


>sp|P14300|DRAG_RHORU ADP-ribosyl-[dinitrogen reductase]
glycohydrolase OS=Rhodospirillum rubrum GN=draG PE=1
SV=1
Length = 294

Score = 31.2 bits (69), Expect = 3.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = -1

Query: 456 YFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSL-------DEAPQGGRSRIATRIPRE 298
Y+ +F+S ++ ++ GD+D G+L G L D+ P G S++ ++ RE
Sbjct: 223 YYFVTDTFKSC---LIQTVNQGGDADTTGALAGMLAGATYGVDDIPSGWLSKLDMKVERE 279

Query: 297 LRDQ 286
+R Q
Sbjct: 280 IRRQ 283


>sp|Q9WTW1|GRIP2_RAT Glutamate receptor-interacting protein 2
OS=Rattus norvegicus GN=Grip2 PE=1 SV=1
Length = 1043

Score = 30.8 bits (68), Expect = 4.4
Identities = 24/65 (36%), Positives = 29/65 (44%)
Frame = -1

Query: 531 PRPSRHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSL 352
PR S LS S D D EA + T F + P+V S++ES G S G GS
Sbjct: 746 PRQSGSLSEASDVDEDPPEALKGGLLTT---HFSPAVPSVDSAVESWGSSATEGGFGGSG 802

Query: 351 DEAPQ 337
PQ
Sbjct: 803 SYTPQ 807


>sp|Q8UIG9|NTPA_AGRT5 Nucleoside-triphosphatase OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=Atu0326 PE=3
SV=2
Length = 214

Score = 30.8 bits (68), Expect = 4.5
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2

Query: 332 PPCGASSKEPGNDPMRSESPVDSKEESTFGAELRKEEGGVKYGDARNASIESGSVKEFKD 511
PP G S G DP+ D+ TFG E+ G K+GDA S + + K+F +
Sbjct: 156 PPRGTSGF--GYDPIFKPDGYDT----TFGEMSADEKHGWKHGDAFALSHRARAFKKFVE 209

Query: 512 KCLD 523
CL+
Sbjct: 210 TCLE 213


>sp|P32945|PPQ1_YEAST Serine/threonine-protein phosphatase PPQ
OS=Saccharomyces cerevisiae GN=PPQ1 PE=1 SV=1
Length = 549

Score = 30.4 bits (67), Expect = 5.8
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1

Query: 510 SLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSS----LESTGDSDRIGSLPGSLDEA 343
S N LT P E+ +SP SS+ SSA + SS L+S+G S R+ S S+
Sbjct: 142 SNNILTSPSYRESNYSSPSSYSFSSYYSSATSASSSTSSFLKSSGLSSRVKSPSSSVKAG 201

Query: 342 PQGGRSRIATRIP 304
G S + IP
Sbjct: 202 SFGAPSSPTSGIP 214


>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens
GN=KIF13B PE=1 SV=1
Length = 1826

Score = 30.0 bits (66), Expect = 7.6
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = -1

Query: 534 APRPSRHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGS 355
AP P+ +S + PD + A+ Y P SF P +L SL D R G P
Sbjct: 1424 APAPALSVSPQNNHSPDPGLSNLAASYLNPVKSFVPQMPKLLKSLFPVRDEKR-GKRPSP 1482

Query: 354 LDEAP 340
L P
Sbjct: 1483 LAHQP 1487


>sp|O73741|COE2_XENLA Transcription factor COE2 OS=Xenopus laevis
GN=coe2 PE=2 SV=2
Length = 574

Score = 30.0 bits (66), Expect = 7.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1

Query: 61 EREVEMGTRKPENGHSLWYTTLQMLYKTQYKSGHDVYALLVHRITQQ 201
E E E T K NG + LQ+LY ++ D Y L+ +T+Q
Sbjct: 94 ENEKEFSTEKTNNGT---HYKLQLLYSNGVRTEQDFYVRLIDSVTKQ 137


>sp|O08792|COE2_MOUSE Transcription factor COE2 OS=Mus musculus
GN=Ebf2 PE=1 SV=4
Length = 575

Score = 30.0 bits (66), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1

Query: 61 EREVEMGTRKPENGHSLWYTTLQMLYKTQYKSGHDVYALLVHRITQQ 201
E + E G K NG + LQ+LY ++ D+Y L+ +T+Q
Sbjct: 93 ENDKEQGNEKTNNGT---HYKLQLLYSNGVRTEQDLYVRLIDSVTKQ 136


>sp|Q9HAK2|COE2_HUMAN Transcription factor COE2 OS=Homo sapiens
GN=EBF2 PE=2 SV=4
Length = 575

Score = 30.0 bits (66), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1

Query: 61 EREVEMGTRKPENGHSLWYTTLQMLYKTQYKSGHDVYALLVHRITQQ 201
E + E G K NG + LQ+LY ++ D+Y L+ +T+Q
Sbjct: 93 ENDKEQGNEKTNNGT---HYKLQLLYSNGVRTEQDLYVRLIDSVTKQ 136


tr_hit_id Q745W6
Definition tr|Q745W6|Q745W6_THET2 Putative uncharacterized protein OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Align length 81
Score (bit) 36.6
E-value 0.89
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914343|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_H02.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q745W6|Q745W6_THET2 Putative uncharacterized protein OS=Therm... 37 0.89
tr|Q3ELL0|Q3ELL0_BACTI Acetylornithine deacetylase / 4-acetamido... 36 1.5
tr|B7IVD2|B7IVD2_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 36 1.5
tr|B6KSD7|B6KSD7_TOXGO Translation initiation factor IF-2, putat... 35 2.0
tr|B4JYT4|B4JYT4_DROGR GH22347 OS=Drosophila grimshawi GN=GH2234... 35 2.0
tr|O86812|O86812_STRCO Putative uncharacterized protein SCO5752 ... 35 2.0
tr|Q81QW8|Q81QW8_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|Q738R3|Q738R3_BACC1 Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|Q6HJ69|Q6HJ69_BACHK Acetylornithine deacetylase OS=Bacillus t... 35 2.6
tr|Q1BPH3|Q1BPH3_BURCA Putative uncharacterized protein OS=Burkh... 35 2.6
tr|B1K975|B1K975_BURCC Putative uncharacterized protein OS=Burkh... 35 2.6
tr|A0RDS3|A0RDS3_BACAH Acetylornithine deacetylase OS=Bacillus t... 35 2.6
tr|A0B1I6|A0B1I6_BURCH Putative uncharacterized protein OS=Burkh... 35 2.6
tr|B7JMM4|B7JMM4_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B5UU38|B5UU38_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B4V218|B4V218_9ACTO Putative uncharacterized protein OS=Strep... 35 2.6
tr|B3ZUS8|B3ZUS8_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B3ZA29|B3ZA29_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B3YT04|B3YT04_BACCE Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B3J2D1|B3J2D1_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B1UIW1|B1UIW1_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B1GIE8|B1GIE8_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B1EZ09|B1EZ09_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B0QEN4|B0QEN4_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B0Q3H9|B0Q3H9_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B0AQR6|B0AQR6_BACAN Peptidase, M20/M25/M40 family OS=Bacillus... 35 2.6
tr|B6N2U4|B6N2U4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6
tr|B6MRN7|B6MRN7_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6
tr|B0G853|B0G853_9FIRM Putative uncharacterized protein OS=Dorea... 35 3.3
tr|Q81DV3|Q81DV3_BACCR Acetylornithine deacetylase OS=Bacillus c... 35 3.4

>tr|Q745W6|Q745W6_THET2 Putative uncharacterized protein OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_P0189 PE=4 SV=1
Length = 609

Score = 36.6 bits (83), Expect = 0.89
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -1

Query: 522 SRHLSLNSLTDPDSMEAFRASPY----FTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGS 355
+RH +L +L DP+SM RAS Y + P+++ + + L +T D+ R+G G
Sbjct: 153 TRHGTLVALLDPNSMRVVRASVYGWANNSWPTAYAAGSDGYLYLAGTTADARRMGDGTGG 212

Query: 354 LD--EAPQGGRSRIATRIPRE 298
D AP+ G T+I E
Sbjct: 213 WDYSYAPESGSEVFLTKIDPE 233


>tr|Q3ELL0|Q3ELL0_BACTI Acetylornithine deacetylase /
4-acetamidobutyryl-CoA deacetylase-thioesterase
OS=Bacillus thuringiensis serovar israelensis ATCC 35646
GN=RBTH_02370 PE=4 SV=1
Length = 422

Score = 35.8 bits (81), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 519 RHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAP 340
R L L+ S + PYF P + S +PN++++L+ +GD + L G +D P
Sbjct: 48 RELGLDLDIWEPSFSKMKGHPYFVSPRTSFSDSPNIVATLKGSGDGKSM-ILNGHIDVVP 106

Query: 339 QG 334
+G
Sbjct: 107 EG 108


>tr|B7IVD2|B7IVD2_BACCE Peptidase, M20/M25/M40 family OS=Bacillus
cereus G9842 GN=BCG9842_B3045 PE=4 SV=1
Length = 422

Score = 35.8 bits (81), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 519 RHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAP 340
R L L+ S + PYF P + S +PN++++L+ +GD + L G +D P
Sbjct: 48 RELGLDLDIWEPSFSKMKGHPYFVSPRTSFSDSPNIVATLKGSGDGKSM-ILNGHIDVVP 106

Query: 339 QG 334
+G
Sbjct: 107 EG 108


>tr|B6KSD7|B6KSD7_TOXGO Translation initiation factor IF-2, putative
OS=Toxoplasma gondii ME49 GN=TGME49_014270 PE=4 SV=1
Length = 1144

Score = 35.4 bits (80), Expect = 2.0
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = +2

Query: 380 SESPVDSKEESTFGAELRKEEGGVKYGDARNASIESGSVKEFKDKCLDGRGA 535
SES DS+ ES G+E E GG ESGS +E K K DG+ A
Sbjct: 65 SESDSDSESESASGSESESESGG---------GSESGSEREDKSKARDGKAA 107


>tr|B4JYT4|B4JYT4_DROGR GH22347 OS=Drosophila grimshawi GN=GH22347
PE=4 SV=1
Length = 1714

Score = 35.4 bits (80), Expect = 2.0
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2

Query: 290 SLNSRGIRVAILDLPPCGASSKEPGNDPMRSESPVDSKEESTFGAELRKEEGGVKYGDAR 469
S S GIR A+ LP K P P +SE + +EE ++ K++ + DA+
Sbjct: 852 SFTSIGIRAAMPKLPSFRRVPKHPSPIPDKSERDLSDQEEMVQRSDSDKDDSNMDSSDAQ 911

Query: 470 NASIESGSVK 499
N +I+ S++
Sbjct: 912 NINIKRRSLQ 921


>tr|O86812|O86812_STRCO Putative uncharacterized protein SCO5752
OS=Streptomyces coelicolor GN=SCO5752 PE=4 SV=1
Length = 493

Score = 35.4 bits (80), Expect = 2.0
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1

Query: 468 RASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSL-DEAPQGG-RSRIATRIPRE 298
+ +PYF SF+ SAPNVL ++ GD+DR L ++ +AP+ G RS P E
Sbjct: 291 KVAPYFD--LSFQHSAPNVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGE 347


>tr|Q81QW8|Q81QW8_BACAN Peptidase, M20/M25/M40 family OS=Bacillus
anthracis GN=BAS2142 PE=4 SV=1
Length = 422

Score = 35.0 bits (79), Expect = 2.6
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 519 RHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAP 340
R L L+ S + PYF P + S +PN++++L+ +GD + L G +D P
Sbjct: 48 RELGLDLDIWEPSFSKMKDHPYFVSPRTSFSDSPNIVATLKGSGDGKSM-ILNGHIDVVP 106

Query: 339 QG 334
+G
Sbjct: 107 EG 108


>tr|Q738R3|Q738R3_BACC1 Peptidase, M20/M25/M40 family OS=Bacillus
cereus (strain ATCC 10987) GN=BCE_2331 PE=4 SV=1
Length = 422

Score = 35.0 bits (79), Expect = 2.6
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 519 RHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAP 340
R L L+ S + PYF P + S +PN++++L+ +GD + L G +D P
Sbjct: 48 RELGLDLDIWEPSFSKMKDHPYFVSPRTSFSDSPNIVATLKGSGDGKSM-ILNGHIDVVP 106

Query: 339 QG 334
+G
Sbjct: 107 EG 108


>tr|Q6HJ69|Q6HJ69_BACHK Acetylornithine deacetylase OS=Bacillus
thuringiensis subsp. konkukian GN=argE PE=4 SV=1
Length = 422

Score = 35.0 bits (79), Expect = 2.6
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 519 RHLSLNSLTDPDSMEAFRASPYFTPPSSFRSSAPNVLSSLESTGDSDRIGSLPGSLDEAP 340
R L L+ S + PYF P + S +PN++++L+ +GD + L G +D P
Sbjct: 48 RELGLDLDIWEPSFSKMKDHPYFVSPRTSFSDSPNIVATLKGSGDGKSM-ILNGHIDVVP 106

Query: 339 QG 334
+G
Sbjct: 107 EG 108


>tr|Q1BPH3|Q1BPH3_BURCA Putative uncharacterized protein
OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_3589 PE=4 SV=1
Length = 203

Score = 35.0 bits (79), Expect = 2.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1

Query: 483 SMEAFRASPYFTPPSSFRSS-APNVLSSLESTGDSDRIGSLPGSLDEAPQGGRSRIATRI 307
++ +RA+P PP + A VL+ L + D D G + G+ P G R R+ R+
Sbjct: 4 ALARWRAAPAAPPPGHRPGAIAARVLADLRAVRDDDGAGGVGGATARLPNGVRVRVDERV 63

Query: 306 PRELRDQTV 280
R+ TV
Sbjct: 64 ERQFLMHTV 72