BP914328
Clone id YMU001_000057_F09
Library
Length 454
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGTTTTTTTTTTTTTGCATTTCCCCTTTACATGAGCCCCAGTACACCATTGAATACCA
ATAGTCCTCTTTGAATCACTTTGGAGAAGATTGGNTCCCTTGCCTTATCCTTGTCAATAC
CGCACCTCAAGCCTTATAACTCCCTTTACATCAACAACCCTTCAAGCTACATCCCCGATT
GTGATATCGCCTACTACCATGAGGGTCTGATATGGTGCCCTCATCAACCAAAACGTTCAT
CAATTAAAGCCCTCAAAAATTGCAACCTTTCATCTCTAGCCACCATTGATTAACCTTGCA
ATCTTGAACGTTAGACTCCTCTATGTCTAGGACATATCCTATGCACAATCACACCCAACA
CATTGACAAGAAATCTCTGCTTGTGTCCCTTATTTGGAAATGTGTGAGACAAGTTTTAGC
ATTAGATTCTCAAGCCCTCAAGCCTCGAGTACCT
■■Homology search results ■■ -
sp_hit_id Q66IN2
Definition sp|Q66IN2|QSER1_XENLA Glutamine and serine-rich protein 1 OS=Xenopus laevis
Align length 75
Score (bit) 33.9
E-value 0.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914328|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_F09.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66IN2|QSER1_XENLA Glutamine and serine-rich protein 1 OS=Xen... 34 0.30
sp|Q62635|MUC2_RAT Mucin-2 (Fragment) OS=Rattus norvegicus GN=Mu... 31 2.6
sp|A8YD90|MTNA_MICAE Methylthioribose-1-phosphate isomerase OS=M... 29 9.8
sp|A2R9P6|FYV10_ASPNC Protein fyv10 OS=Aspergillus niger (strain... 29 9.8

>sp|Q66IN2|QSER1_XENLA Glutamine and serine-rich protein 1
OS=Xenopus laevis GN=qser1 PE=2 SV=2
Length = 1673

Score = 33.9 bits (76), Expect = 0.30
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1

Query: 16 MSPSTPL----NTNSPL*ITLEKIGSLALSLSIPHLKPYNSLYINNPSSYIPDCDIAYYH 183
+SP PL + +P +T E+IGS LS SIP Y S + P P +
Sbjct: 94 LSPHDPLLQIKTSQTPTALTFERIGSAVLSTSIPQSSTYRSAQESAPHLLQPQFSLLPSA 153

Query: 184 EGLIWCPHQPKRSSI 228
G P QP +S+
Sbjct: 154 LGGTQQPAQPYSTSV 168


>sp|Q62635|MUC2_RAT Mucin-2 (Fragment) OS=Rattus norvegicus GN=Muc2
PE=1 SV=1
Length = 1513

Score = 30.8 bits (68), Expect = 2.6
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +2

Query: 80 PLPYPCQYRTSSLITPFTSTTLQATSPIVISPTT 181
P P P TS +P TSTT TSPI SPTT
Sbjct: 1476 PTPSPTTSTTSPTPSPTTSTTSPTTSPIT-SPTT 1508


>sp|A8YD90|MTNA_MICAE Methylthioribose-1-phosphate isomerase
OS=Microcystis aeruginosa GN=mtnA PE=3 SV=1
Length = 353

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1

Query: 181 HEGLIWCPHQPKRSSIKALKNCNLSSLAT 267
H GL+ P QP++ +I L +CN SLAT
Sbjct: 148 HHGLLALPEQPEKLTI--LTHCNTGSLAT 174


>sp|A2R9P6|FYV10_ASPNC Protein fyv10 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=fyv10 PE=3 SV=2
Length = 406

Score = 28.9 bits (63), Expect = 9.8
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +1

Query: 112 KPYNSLYINNPSSYIPDCDIAYYHEGLIWCP----HQPKRSSIKALKNCNLSSLATID*P 279
+PY S+Y + +Y+ D + +HE L H + + ALK + S T
Sbjct: 260 EPYKSMYAHERWAYLSDLFVRTHHELLSLSSRPLLHIALSAGLSALKTPSCHSAYTSSSS 319

Query: 280 CNLER*TPLCLGHILCTITPNTLTRNL 360
+L T +C +C+ N L RN+
Sbjct: 320 NSLSTTTSVC---PICSTELNELARNM 343


tr_hit_id Q80Z19
Definition tr|Q80Z19|Q80Z19_MOUSE Secreted gel-forming mucin (Fragment) OS=Mus musculus
Align length 32
Score (bit) 37.0
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914328|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_F09.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q80Z19|Q80Z19_MOUSE Secreted gel-forming mucin (Fragment) OS=... 37 0.49
tr|A0JP95|A0JP95_XENTR LOC100036640 protein (Fragment) OS=Xenopu... 34 4.1
tr|Q7RB60|Q7RB60_PLAYO Putative uncharacterized protein PY06288 ... 33 5.4

>tr|Q80Z19|Q80Z19_MOUSE Secreted gel-forming mucin (Fragment) OS=Mus
musculus GN=Muc2 PE=4 SV=1
Length = 1442

Score = 37.0 bits (84), Expect = 0.49
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2

Query: 89 YPCQYRTSSLITPFTSTTLQATSPIVISPTTM 184
YP +Y T S I+P TSTT +T+P SPTT+
Sbjct: 1383 YPMEYCTPSTISPTTSTTTLSTTPPTSSPTTL 1414


>tr|A0JP95|A0JP95_XENTR LOC100036640 protein (Fragment) OS=Xenopus
tropicalis GN=LOC100036640 PE=2 SV=1
Length = 1447

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1

Query: 16 MSPSTPL----NTNSPL*ITLEKIGSLALSLSIPHLKPYNSLYINNPSSYIPDCDIAYYH 183
+SP PL + +P +T E+IGS LS SIP Y S + P P +
Sbjct: 94 LSPHDPLLQIKTSQTPTALTFERIGSAVLSTSIPQSSTYRSAQESAPHLLQPQFSLLPTA 153

Query: 184 EGLIWCPHQPKRSSI 228
G P QP +S+
Sbjct: 154 LGGTQQPAQPYSTSV 168


>tr|Q7RB60|Q7RB60_PLAYO Putative uncharacterized protein PY06288
OS=Plasmodium yoelii yoelii GN=PY06288 PE=4 SV=1
Length = 716

Score = 33.5 bits (75), Expect = 5.4
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1

Query: 100 IPHLKPYNSLYINNPSSYIPDCD-IAYYHEGLIWCPHQPKRSSIKALKNCNLSSLATID* 276
I H+K N Y NPS+YI CD + Y+ G+I+ R S K C
Sbjct: 391 INHIKKTNKSYYFNPSNYIYICDYLDYFIYGIIYFLKNNFRRSSKYFNKC---------- 440

Query: 277 PCNLER*TPLCLGHIL-CTITPNTLT 351
++++ LC ++L +T NTLT
Sbjct: 441 -ISIKKNFYLCYIYLLKIALTNNTLT 465