BP914318 |
Clone id |
YMU001_000057_E11 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000057_E11. |
Accession |
BP914318 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3706Contig1 |
Sequence |
CAAGCTTGACTTACTGAAGCAACCGGAGTCACCCTCTGCAAAACTAGTTTTGCAGCTTTT TAGATACCTGTTTGTAGCAGTTGCAAAAAGCCAAGGAGATTGTGAACGTGTTCTTCAGCC TCATATTGCAACACTTATGGAGACGTGTATCAAATGTGCAACAGAAGTTGAAAAGCCCCA AGGCTATATGCTTTTGCTCCGCACAATGTTTCAATCTCTTTCAAGCGGGAAGTTTGAGCT GCTTTTTCGAGAATTTATTCCATATTTGCAGCCTTGTCTCAACATGCTTCTTGGAATGTT GGAGGGGCCTACAGGGGTCGAAATGATCGACTTGGTCGTAGAACTTTGTCTCATCATGCC TGCTAGGTTGAGCTCTCTTTTACCTCATCTTCCTCGGCTAATGAAGCCTCTTGTTTTAGC TTTGAAAGGCAATGAAGATCTTGTGGGCTTGGGCTTAAGGACACTCGAACTCTGGATTGA CAGCTTAAATCCTGATTTTCTTGAACCCAGTATGGCCGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Y4A5 |
Definition |
sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens |
Align length |
155 |
Score (bit) |
110.0 |
E-value |
3.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SCG8 |
Definition |
tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
172 |
Score (bit) |
258.0 |
E-value |
9.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914318|Adiantum capillus-veneris mRNA, clone: YMU001_000057_E11. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella paten... 258 9e-68 tr|A7QDY4|A7QDY4_VITVI Chromosome chr4 scaffold_83, whole genome... 233 4e-60 tr|A3BMS7|A3BMS7_ORYSJ Putative uncharacterized protein OS=Oryza... 233 4e-60 tr|B8B548|B8B548_ORYSI Putative uncharacterized protein OS=Oryza... 230 4e-59 tr|Q9SL52|Q9SL52_ARATH Putative uncharacterized protein At2g1793... 208 1e-52 tr|O65645|O65645_ARATH ATM-like protein OS=Arabidopsis thaliana ... 203 4e-51 tr|A5B1U1|A5B1U1_VITVI Putative uncharacterized protein OS=Vitis... 196 8e-49 tr|A4S164|A4S164_OSTLU Predicted protein OS=Ostreococcus lucimar... 142 1e-32 tr|Q013R7|Q013R7_OSTTA FAT domain-containing protein / phosphati... 140 3e-32 tr|A9V4X9|A9V4X9_MONBE Predicted protein OS=Monosiga brevicollis... 131 2e-29 tr|Q1DT98|Q1DT98_COCIM Putative uncharacterized protein OS=Cocci... 129 7e-29 tr|B8MAR8|B8MAR8_9EURO Histone acetylase complex subunit Paf400,... 129 9e-29 tr|B6QF50|B6QF50_PENMA Histone acetylase complex subunit Paf400,... 129 9e-29 tr|Q2UAI4|Q2UAI4_ASPOR Histone acetyltransferase SAGA OS=Aspergi... 129 1e-28 tr|B8NQ86|B8NQ86_ASPFL Histone acetylase complex subunit Paf400,... 129 1e-28 tr|Q5AUN0|Q5AUN0_EMENI Putative uncharacterized protein OS=Emeri... 128 2e-28 tr|A7E8U9|A7E8U9_SCLS1 Putative uncharacterized protein OS=Scler... 126 6e-28 tr|Q4WED0|Q4WED0_ASPFU Histone acetylase complex subunit Paf400,... 126 7e-28 tr|B6HJI0|B6HJI0_PENCH Pc21g15390 protein OS=Penicillium chrysog... 126 7e-28 tr|B0Y2D8|B0Y2D8_ASPFC Histone acetylase complex subunit Paf400,... 126 7e-28 tr|A8QD26|A8QD26_MALGO Putative uncharacterized protein OS=Malas... 126 7e-28 tr|A6SM23|A6SM23_BOTFB Putative uncharacterized protein OS=Botry... 126 7e-28 tr|A5AAC6|A5AAC6_ASPNC Remark: TRRAP is an essential cofactor fo... 126 7e-28 tr|A1D055|A1D055_NEOFI Histone acetylase complex subunit Paf400,... 126 7e-28 tr|A1C580|A1C580_ASPCL Histone acetylase complex subunit Paf400,... 125 1e-27 tr|Q0CAR0|Q0CAR0_ASPTN Putative uncharacterized protein OS=Asper... 124 2e-27 tr|Q2HBF6|Q2HBF6_CHAGB Putative uncharacterized protein OS=Chaet... 124 3e-27 tr|B2B6R7|B2B6R7_PODAN Predicted CDS Pa_2_8620 OS=Podospora anse... 124 3e-27 tr|Q9HEI9|Q9HEI9_NEUCR Related to the component Tra1 of the SAGA... 124 4e-27 tr|Q7S7K6|Q7S7K6_NEUCR Putative uncharacterized protein OS=Neuro... 124 4e-27
>tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_183414 PE=4 SV=1 Length = 3825
Score = 258 bits (660), Expect = 9e-68 Identities = 129/172 (75%), Positives = 145/172 (84%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD LKQP++P+AKLVLQLFRYLFVAVAK DCERVLQPH+ TLME+C+K ATEVEKP Sbjct: 573 KLDTLKQPDTPAAKLVLQLFRYLFVAVAKFSADCERVLQPHVITLMESCMKNATEVEKPL 632
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GYM LLRTMF++LS GKFELLFREFIP LQPCLNMLL M+EGPTG++MIDLVVELCL +P Sbjct: 633 GYMQLLRTMFRALSGGKFELLFREFIPTLQPCLNMLLAMVEGPTGLDMIDLVVELCLTLP 692
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMA 517 A MKPLVLAL G+++LV LGLRTLE WIDSLNP+FLEPSMA Sbjct: 693 ARLSSLLPHLHRLMKPLVLALGGSDELVALGLRTLEFWIDSLNPEFLEPSMA 744
>tr|A7QDY4|A7QDY4_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036786001 PE=4 SV=1 Length = 3813
Score = 233 bits (594), Expect = 4e-60 Identities = 113/173 (65%), Positives = 137/173 (79%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD+LK P+SP++KLVL LFR+LF AV K+ D ER+LQPH+ +ME C+K ATEVE+P Sbjct: 705 KLDVLKHPDSPASKLVLHLFRFLFGAVPKAPSDMERILQPHVPVIMEVCMKNATEVERPL 764
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GY+ LLRTMF++L+ GKFELL R+ IP LQPCLNMLLGMLEGPTG +M DL++ELCL +P Sbjct: 765 GYIQLLRTMFRALAGGKFELLLRDLIPTLQPCLNMLLGMLEGPTGEDMRDLLLELCLTLP 824
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 + MKPLVL LKG +DLV LGLRTLE W+DSLNPDFLEPSMA+ Sbjct: 825 SRLSSLLPFLPRLMKPLVLCLKGGDDLVSLGLRTLEFWVDSLNPDFLEPSMAN 877
>tr|A3BMS7|A3BMS7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024349 PE=4 SV=1 Length = 3671
Score = 233 bits (594), Expect = 4e-60 Identities = 115/173 (66%), Positives = 136/173 (78%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD LKQP+SP+AKLVLQLFR+LFVA AK+ CER LQPH+ +ME C+K ATEVEKP Sbjct: 552 KLDALKQPDSPAAKLVLQLFRFLFVAAAKAPESCERTLQPHVPVIMEVCMKSATEVEKPL 611
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GYM LLR+MF++L+ KF+ L R+ IP LQPCLNMLL ML+GPT +M DL++ELCLI+P Sbjct: 612 GYMHLLRSMFRALNIAKFDSLMRDLIPSLQPCLNMLLSMLDGPTSEDMRDLILELCLILP 671
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 A MKPLVLALKG++DLV L LRTLE WIDSLNPDFLEPSMA+ Sbjct: 672 ARLSSLLPHIPRLMKPLVLALKGSDDLVSLALRTLEFWIDSLNPDFLEPSMAN 724
>tr|B8B548|B8B548_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27084 PE=4 SV=1 Length = 3795
Score = 230 bits (586), Expect = 4e-59 Identities = 114/173 (65%), Positives = 135/173 (78%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD LKQP+SP+AKLVLQLFR+LFVA AK+ CER LQPH+ +ME C+K ATEVEKP Sbjct: 552 KLDALKQPDSPAAKLVLQLFRFLFVAAAKAPESCERTLQPHVPVIMEVCMKSATEVEKPL 611
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GYM LLR+MF++L+ KF+ L R+ IP LQPCL MLL ML+GPT +M DL++ELCLI+P Sbjct: 612 GYMHLLRSMFRALNIAKFDSLMRDLIPSLQPCLYMLLSMLDGPTSEDMRDLILELCLILP 671
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 A MKPLVLALKG++DLV L LRTLE WIDSLNPDFLEPSMA+ Sbjct: 672 ARLSSLLPHIPRLMKPLVLALKGSDDLVSLALRTLEFWIDSLNPDFLEPSMAN 724
>tr|Q9SL52|Q9SL52_ARATH Putative uncharacterized protein At2g17930 (Fragment) OS=Arabidopsis thaliana GN=At2g17930 PE=2 SV=2 Length = 2938
Score = 208 bits (529), Expect = 1e-52 Identities = 103/173 (59%), Positives = 128/173 (73%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD+LK P+S + KLVL LFR +F AV K+ D ER+LQ H+ +ME C+K ATEVEKP Sbjct: 560 KLDVLKNPDSAATKLVLHLFRCIFGAVTKTPSDFERILQHHVPVIMEVCMKNATEVEKPL 619
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GYM LLRT+F+ L+ K+ELL R+ IP L PCLN+LL MLEGP G +M DL++ELCL +P Sbjct: 620 GYMQLLRTVFRGLAGCKYELLLRDLIPMLLPCLNILLTMLEGPAGEDMKDLLLELCLTLP 679
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 A MKPLV L+G+++LV LGLRTLE W+DSLNPDFLEPSMA+ Sbjct: 680 ARLSSLLPYLPRLMKPLVFCLRGSDELVSLGLRTLEFWVDSLNPDFLEPSMAN 732
>tr|O65645|O65645_ARATH ATM-like protein OS=Arabidopsis thaliana GN=T19K4.210 PE=4 SV=1 Length = 3738
Score = 203 bits (517), Expect = 4e-51 Identities = 101/172 (58%), Positives = 127/172 (73%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD+LK P+S + KL+L LFR LF AV+K+ D ER+LQP + +ME C+K ATEVEKP Sbjct: 629 KLDVLKNPDSAATKLILHLFRCLFGAVSKAPSDFERILQPQVPLIMEVCMKNATEVEKPL 688
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GYM LLRT+F+ L+ KFELL R+ +P L PCLN+LL MLEGP G +M DL++EL L +P Sbjct: 689 GYMQLLRTVFRGLAGCKFELLLRDLVPMLLPCLNILLTMLEGPAGEDMRDLLLELSLTLP 748
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMA 517 A M+PLV L+G+++LV LGLRTLE W+DSLNPDFLEPSMA Sbjct: 749 ARLSSLLPYLPRLMRPLVSCLRGSDELVSLGLRTLEFWVDSLNPDFLEPSMA 800
>tr|A5B1U1|A5B1U1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021747 PE=4 SV=1 Length = 2411
Score = 196 bits (497), Expect = 8e-49 Identities = 101/173 (58%), Positives = 123/173 (71%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KLD+LK P+SP++KLVL LFR+LF AV K+ D ER+LQPH+ +ME C+K ATEVE+P Sbjct: 232 KLDVLKHPDSPASKLVLHLFRFLFGAVPKAPSDMERILQPHVPVIMEVCMKNATEVERPL 291
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 GY+ LLRTMF++L+ GKFELL R+ IP LQPCLNMLLGMLEGPTG +M DL++ELCL +P Sbjct: 292 GYIQLLRTMFRALAGGKFELLLRDLIPTLQPCLNMLLGMLEGPTGEDMRDLLLELCLTLP 351
Query: 362 AXXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 + MKPLVL LKG SLNPDFLEPSMA+ Sbjct: 352 SRLSSLLPFLPRLMKPLVLCLKG-----------------SLNPDFLEPSMAN 387
>tr|A4S164|A4S164_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_42472 PE=4 SV=1 Length = 3790
Score = 142 bits (357), Expect = 1e-32 Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KL L S A+LVL+LF L AV+K +CE VL H+ T+ME+C++ E E P Sbjct: 584 KLSCLSDQSSQEAQLVLKLFSLLLHAVSK-HSNCETVLSSHVITMMESCLQAIREHENPT 642
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 Y+ LLR +F++++ KF++L+RE +P L L+ LL ML GP E+ D VVELCLI+P Sbjct: 643 AYIRLLRYLFRAMAQAKFDVLYREVVPILPASLDCLLEMLNGPDPHELHDTVVELCLILP 702
Query: 362 AXXXXXXXXXXXXMKPLVLALKGN-EDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 A PL AL+ +L LGLRTLE W+DSLNP+FL+P +A+ Sbjct: 703 ARLSSILPHLPKLATPLCKALRAPVNELNLLGLRTLEFWVDSLNPEFLDPCIAE 756
>tr|Q013R7|Q013R7_OSTTA FAT domain-containing protein / phosphatidylinositol 3-and 4-kinase family protein (ISS) (Fragment) OS=Ostreococcus tauri GN=Ot08g01230 PE=4 SV=1 Length = 3489
Score = 140 bits (354), Expect = 3e-32 Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 1/174 (0%) Frame = +2
Query: 2 KLDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQ 181 KL+ L+ S A+LVL+LF L A++K CE VL H+ +M+ C+K E + P Sbjct: 625 KLECLRDQSSQEAQLVLKLFSLLLHAISK-HSHCESVLSTHVIFMMDACLKAIRENDNPS 683
Query: 182 GYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMP 361 Y+ LLR +F++++ KF++L++E +P L L+ LL ML GP +E+ D VVELCLI+P Sbjct: 684 AYVRLLRYLFRAMAQAKFDVLYQEVVPILPATLDCLLAMLNGPDPLELHDTVVELCLILP 743
Query: 362 AXXXXXXXXXXXXMKPLVLALKGN-EDLVGLGLRTLELWIDSLNPDFLEPSMAD 520 A PL AL+ + +L LGLRTLE W+DSLNP+FL+P +A+ Sbjct: 744 ARLSSILPHLPKLAMPLCRALRAHANELNLLGLRTLEFWVDSLNPEFLDPCIAE 797
>tr|A9V4X9|A9V4X9_MONBE Predicted protein OS=Monosiga brevicollis GN=10012 PE=4 SV=1 Length = 4875
Score = 131 bits (330), Expect = 2e-29 Identities = 70/168 (41%), Positives = 103/168 (61%) Frame = +2
Query: 5 LDLLKQPESPSAKLVLQLFRYLFVAVAKSQGDCERVLQPHIATLMETCIKCATEVEKPQG 184 L LL Q + A + L+LF+ F ++A E++LQPH+ T++ C++ A ++P Sbjct: 782 LKLLGQEDENRALVRLRLFKLTFGSIALMPDTNEQILQPHLQTIIHDCMQYAPSAKEPLK 841
Query: 185 YMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPTGVEMIDLVVELCLIMPA 364 + LLLR +F+S+ GKFELL++EF+P L L +L T ++ DL+VELCL +P Sbjct: 842 FFLLLRALFRSIGGGKFELLYKEFLPLLPNLLARFNQLLLTTTRQQLRDLLVELCLTVPV 901
Query: 365 XXXXXXXXXXXXMKPLVLALKGNEDLVGLGLRTLELWIDSLNPDFLEP 508 M+PLVLAL+ +DLV GLRTLEL ID+L P+FL+P Sbjct: 902 RLSALLPHLHFLMRPLVLALRATDDLVSQGLRTLELCIDNLTPEFLDP 949
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