BP914317 |
Clone id |
YMU001_000057_E10 |
Library |
YMU01 |
Length |
478 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000057_E10. |
Accession |
BP914317 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GACGCCCGATGGCGAGAAGGTAATTGACGTTCCAGGGGACACCTACCTTTTGGATGCTGG TGAGGAAGCTGGGCTTGACCTGCCCTACTCCTGCCGTGCGGGCGCTTGCTCTTCCTGCGC TGGCAAGCTCGTCTCTGGGAGCGTAGACCAGAGCGACCAGTCCTTCCTCGACGATGATCA GGTGGAGGCTGGTTTCGTCCTTACATGTAACGCCTACCCCACATCTGACCTTGTCATCAC GACTCACGTAGAGGAAGAGCTTACTGGCTAGGTCTGATTTCAGCAACCCTGCTGGTTTGG CTATTACATCTCCTGCGGACTTTGTTCCCTTCTCCTGATATTGTACACGCCTTTGTTCCA CTTGTAATCAAGAGCATTAAGTTTTTGTTTATCTTGTCCTGCACTGCAACTACCCCATGG ATGGCCATGGGAGTCCTGTCTCATTGCAAACGTAGCGGAGGCTCGTACTTTGTGGTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P00228 |
Definition |
sp|P00228|FER_WHEAT Ferredoxin, chloroplastic OS=Triticum aestivum |
Align length |
88 |
Score (bit) |
114.0 |
E-value |
2.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914317|Adiantum capillus-veneris mRNA, clone: YMU001_000057_E10. (478 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P00228|FER_WHEAT Ferredoxin, chloroplastic OS=Triticum aestiv... 114 2e-25 sp|P27787|FER1_MAIZE Ferredoxin-1, chloroplastic OS=Zea mays GN=... 112 9e-25 sp|P00243|FER_SYNY4 Ferredoxin OS=Synechocystis sp. (strain PCC ... 112 1e-24 sp|P27320|FER_SYNY3 Ferredoxin-1 OS=Synechocystis sp. (strain PC... 112 1e-24 sp|P00250|FER_APHSA Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2 112 1e-24 sp|P00233|FER_GLEJA Ferredoxin OS=Gleichenia japonica PE=1 SV=1 111 1e-24 sp|P09911|FER1_PEA Ferredoxin-1, chloroplastic OS=Pisum sativum ... 111 1e-24 sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=pet... 111 2e-24 sp|P00238|FER_SCEQU Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1 110 3e-24 sp|P83522|FER_HORVU Ferredoxin OS=Hordeum vulgare PE=1 SV=1 110 3e-24 sp|P00231|FER2_PHYAM Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1 110 3e-24 sp|P00225|FER_LEUGL Ferredoxin OS=Leucaena glauca PE=1 SV=1 110 4e-24 sp|P07839|FER_CHLRE Ferredoxin, chloroplastic OS=Chlamydomonas r... 109 6e-24 sp|P00232|FER2_PHYES Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1 109 6e-24 sp|P00230|FER1_PHYES Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1 109 6e-24 sp|P00244|FER1_APHFL Ferredoxin-1 OS=Aphanizomenon flos-aquae PE... 109 6e-24 sp|P00227|FER_BRANA Ferredoxin OS=Brassica napus PE=1 SV=1 108 1e-23 sp|Q0J8M2|FER1_ORYSJ Ferredoxin-1, chloroplastic OS=Oryza sativa... 108 2e-23 sp|A2YQD9|FER1_ORYSI Ferredoxin-1, chloroplastic OS=Oryza sativa... 108 2e-23 sp|P56408|FER_CHLFU Ferredoxin OS=Chlorella fusca PE=1 SV=1 107 2e-23 sp|O04683|FER1_MESCR Ferredoxin-1, chloroplastic OS=Mesembryanth... 107 2e-23 sp|P00255|FER_SYNLI Ferredoxin OS=Synechococcus lividus PE=1 SV=2 107 3e-23 sp|P09735|FER_MARPO Ferredoxin OS=Marchantia polymorpha PE=1 SV=1 107 4e-23 sp|P14938|FER3_RAPSA Ferredoxin, leaf L-A OS=Raphanus sativus PE... 106 5e-23 sp|P00229|FER1_PHYAM Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1 106 5e-23 sp|P85121|FER_PANGI Ferredoxin OS=Panax ginseng PE=1 SV=1 106 6e-23 sp|P00224|FER2_SPIOL Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1 105 8e-23 sp|O04090|FER1_ARATH Ferredoxin-1, chloroplastic OS=Arabidopsis ... 105 8e-23 sp|P00247|FER_CHLFR Ferredoxin OS=Chlorogloeopsis fritschii PE=1... 105 1e-22 sp|P16972|FER2_ARATH Ferredoxin-2, chloroplastic OS=Arabidopsis ... 105 1e-22
>sp|P00228|FER_WHEAT Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2 Length = 143
Score = 114 bits (285), Expect = 2e-25 Identities = 54/88 (61%), Positives = 64/88 (72%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TP+GE ++VP D Y+LD EE G+DLPYSCRAG+CSSCAGKLVSG Sbjct: 55 TPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQ 114
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEELT 265 +EAG+VLTC+AYP SD+VI TH EEELT Sbjct: 115 MEAGWVLTCHAYPKSDIVIETHKEEELT 142
>sp|P27787|FER1_MAIZE Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1 Length = 150
Score = 112 bits (280), Expect = 9e-25 Identities = 53/89 (59%), Positives = 63/89 (70%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TP+GE + VP D Y+LD EE G+DLPYSCRAG+CSSCAGK+VSG Sbjct: 61 TPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQ 120
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEELTG 268 + G+VLTC+AYPTSD+VI TH EEELTG Sbjct: 121 IADGWVLTCHAYPTSDVVIETHKEEELTG 149
>sp|P00243|FER_SYNY4 Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2 Length = 97
Score = 112 bits (279), Expect = 1e-24 Identities = 53/87 (60%), Positives = 61/87 (70%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TPDGE I+ DTY+LDA EEAGLDLPYSCRAGACS+CAGK+ +G Sbjct: 10 TPDGENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQ 69
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEEL 262 +EAG+VLTC AYPTSD I TH EE+L Sbjct: 70 IEAGYVLTCVAYPTSDCTIETHKEEDL 96
>sp|P27320|FER_SYNY3 Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2 Length = 97
Score = 112 bits (279), Expect = 1e-24 Identities = 53/87 (60%), Positives = 61/87 (70%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TPDGE I+ DTY+LDA EEAGLDLPYSCRAGACS+CAGK+ +G Sbjct: 10 TPDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQ 69
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEEL 262 +EAG+VLTC AYPTSD I TH EE+L Sbjct: 70 IEAGYVLTCVAYPTSDCTIETHKEEDL 96
>sp|P00250|FER_APHSA Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2 Length = 97
Score = 112 bits (279), Expect = 1e-24 Identities = 53/87 (60%), Positives = 60/87 (68%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TPDG+ VI VP D Y+LD EE GLDLPYSCRAGACS+CAGKLVSG Sbjct: 10 TPDGDNVITVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQ 69
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEEL 262 ++AG++LTC AYPT D VI TH EE L Sbjct: 70 IQAGYILTCVAYPTGDCVIETHKEEAL 96
>sp|P00233|FER_GLEJA Ferredoxin OS=Gleichenia japonica PE=1 SV=1 Length = 95
Score = 111 bits (278), Expect = 1e-24 Identities = 52/87 (59%), Positives = 60/87 (68%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TPDGE+ I+VP D ++LDAGEEAGLDLPYSCRAGACSSC GKL+ G Sbjct: 9 TPDGERTIEVPDDKFILDAGEEAGLDLPYSCRAGACSSCTGKLLDGRVDQSEQSFLDDDQ 68
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEEL 262 + GFVLTC AYP D+ I TH EE+L Sbjct: 69 MAEGFVLTCVAYPAGDITIETHAEEKL 95
>sp|P09911|FER1_PEA Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2 Length = 149
Score = 111 bits (278), Expect = 1e-24 Identities = 52/88 (59%), Positives = 61/88 (69%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TPDG + + P D Y+LD EE G+DLPYSCRAG+CSSCAGK+V G Sbjct: 61 TPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQ 120
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEELT 265 +EAGFVLTC AYPTSD+VI TH EE+LT Sbjct: 121 IEAGFVLTCVAYPTSDVVIETHKEEDLT 148
>sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2 Length = 99
Score = 111 bits (277), Expect = 2e-24 Identities = 53/82 (64%), Positives = 60/82 (73%) Frame = +2
Query: 17 KVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXXVEAGF 196 K I+VP D Y+LDA EEAG+DLPYSCRAGACS+CAGKL+SG +EAG+ Sbjct: 17 KTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGY 76
Query: 197 VLTCNAYPTSDLVITTHVEEEL 262 VLTC AYPTSD VI TH EEEL Sbjct: 77 VLTCVAYPTSDCVIETHKEEEL 98
>sp|P00238|FER_SCEQU Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1 Length = 96
Score = 110 bits (276), Expect = 3e-24 Identities = 52/87 (59%), Positives = 61/87 (70%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TP G++ I+ P DTY+LDA EEAGLDLPYSCRAGACSSCAGK+ +G Sbjct: 9 TPSGDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQ 68
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEEL 262 ++ GFVLTC AYPTSD I TH EE+L Sbjct: 69 MDGGFVLTCVAYPTSDCTIATHKEEDL 95
>sp|P83522|FER_HORVU Ferredoxin OS=Hordeum vulgare PE=1 SV=1 Length = 97
Score = 110 bits (276), Expect = 3e-24 Identities = 53/88 (60%), Positives = 62/88 (70%) Frame = +2
Query: 2 TPDGEKVIDVPGDTYLLDAGEEAGLDLPYSCRAGACSSCAGKLVSGXXXXXXXXXXXXXX 181 TP+GE ++VP D Y+LD EE G+DLPYSCRAG+CSSCAGKLVSG Sbjct: 9 TPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQ 68
Query: 182 VEAGFVLTCNAYPTSDLVITTHVEEELT 265 +E G+VLTC AYP SD+VI TH EEELT Sbjct: 69 MEEGWVLTCAAYPKSDVVIETHKEEELT 96
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1P759 |
Definition |
tr|B1P759|B1P759_MAIZE Ferredoxin-1 OS=Zea mays |
Align length |
89 |
Score (bit) |
114.0 |
E-value |
2.0e-24 |
Report |
|