BP914314
Clone id YMU001_000057_E07
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000057_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGATTAGGCAAGGTTACGAAGAGTCTTGTAGGCATGAGCATAGTGCAAAAATGACAGAGG
GTGTATTTTACTCTTGATATCATTAAACACAAAGAAATAAGTAAAGCCGCATAATTGTGT
TCGGATTTGTCAACATCTAGCTGTTCAATTTTCTTTCAACCTATTTAGGGAAAAATGACA
TGATGGCACCGCACCCACTAGTGTGAATGCTGGGGGGTAGGCATGTTGGAACATAAAGTT
ACCATTTGACTATCTCACCTCTTTGATGAGTGGTATGGGATATGAATTATTGTTCACCAA
TGTAGATGGTCAAATTTTACAAGTACTGGTTTGCTTTCACTTAAAAGGTTTTTTGTAATG
GTATCATGTGATAACCATAATGAGAAGGCAATGTGATATGATGAGCAAGGGTCCCTTGTG
GTAGATACACGGCACAAAAAGCTTGGTCAAGATGTGGATGTCAGATCTATTGTCGAATCC
GCTTACAAATTTTTGCAGCTCCTCTCAATGATCCATGACTCTTGCACTCTCTCCTGTAAA
CTATAATGTCGTAACATCTAGTCAACTTGGTGGAA
■■Homology search results ■■ -
sp_hit_id O94342
Definition sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271.09 OS=Schizosaccharomyces pombe
Align length 72
Score (bit) 30.4
E-value 6.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914314|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E07.
(575 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271... 30 6.6

>sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271.09
OS=Schizosaccharomyces pombe GN=SPBC1271.09 PE=2 SV=1
Length = 543

Score = 30.4 bits (67), Expect = 6.6
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2

Query: 149 FSFNLFREK*HDGTAPTSVNAGG*ACWNIKLPFDYLT-SLMSGMGYELL---FTNVDGQI 316
F+F L+ DG P + WN+ + YL +L+ G+ +LL + + G +
Sbjct: 317 FAFGLYSSTIVDGVLPADASTARSFGWNVLINTFYLPGALLGGVFSDLLGPKYCLITGLV 376

Query: 317 LQVLVCFHLKGF 352
LQ + F + GF
Sbjct: 377 LQSIFGFFMSGF 388


tr_hit_id B3L6H5
Definition tr|B3L6H5|B3L6H5_PLAKH RNA polymerase I, putative OS=Plasmodium knowlesi (strain H)
Align length 32
Score (bit) 33.9
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914314|Adiantum capillus-veneris mRNA, clone:
YMU001_000057_E07.
(575 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3L6H5|B3L6H5_PLAKH RNA polymerase I, putative OS=Plasmodium ... 34 6.5

>tr|B3L6H5|B3L6H5_PLAKH RNA polymerase I, putative OS=Plasmodium
knowlesi (strain H) GN=PKH_102350 PE=4 SV=1
Length = 2592

Score = 33.9 bits (76), Expect = 6.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1

Query: 446 PSFLCRVSTTRDPCSSYHIAFSLWLSHDTITK 351
PS + + T +D S+YH+AFS +L HD + K
Sbjct: 1645 PSRISYLDTPKDLISNYHVAFSKYLLHDVVPK 1676