BP914220 |
Clone id |
YMU001_000056_D11 |
Library |
YMU01 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000056_D11. |
Accession |
BP914220 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL836Contig1 |
Sequence |
TTGTCAAAGTGGAGTTTCATCCCACTTAGTATATGAACAAAAGATGTAAATATTACTTAT ATTTCAGGTGTCCACATCTCAAAAAATGGACAAAGAATTATACAATGAGGACAAAAGAAT GGACAAGAGTTATAAGAAGGCTACTCTCTCATGCTCTACAGCATAAGTTTCTTGAGTTTG AAGGAGCAACTCTTAGAGAGAAGGTGGGGGTTGGGGGCGGTAGGGTTACTCATTTCGACA TTGCAATCGATTTGGAACTTAGAAGCGCGCGATTTCCAGCTCCCGACTTTGATCCGAACT TTTGCCATTGTCCGGGCATGCAAAAAGATGCTAGAGGTCGCATCGAGGAGCGTAGCTTGC AAAGTAGAGCCAATGGAAGGGGTCAAGGCCACATCTTGGCCACTCATGTGCAAGAGAAGG AGGGTAGTGTTTTGGTGGCCTTGGTAGAAGGCAGGGATTGAACCCTCGCCTATATTTTGG TCCTCGTAGAAGAGCGTCACATCCACTGCATCATAGTAGATGCCAATTTTCTTGTTTGGA TTTTGCGCGCTCACGTTGAAGGTAACGTCTGCGTTGAGGAGTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C615 |
Definition |
sp|Q9C615|SYP24_ARATH Putative syntaxin-24 OS=Arabidopsis thaliana |
Align length |
65 |
Score (bit) |
52.0 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S624 |
Definition |
tr|A9S624|A9S624_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
120 |
Score (bit) |
104.0 |
E-value |
3.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914220|Adiantum capillus-veneris mRNA, clone: YMU001_000056_D11. (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S624|A9S624_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21 tr|A9NKZ0|A9NKZ0_PICSI Putative uncharacterized protein OS=Picea... 92 2e-17 tr|A9NNJ0|A9NNJ0_PICSI Putative uncharacterized protein OS=Picea... 91 4e-17 tr|A7PTL1|A7PTL1_VITVI Chromosome undetermined scaffold_30, whol... 90 1e-16 tr|A9SYE8|A9SYE8_PHYPA Predicted protein OS=Physcomitrella paten... 88 4e-16 tr|A9U1X7|A9U1X7_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14 tr|A9TYZ5|A9TYZ5_PHYPA Predicted protein OS=Physcomitrella paten... 82 3e-14 tr|A9NS79|A9NS79_PICSI Putative uncharacterized protein OS=Picea... 82 3e-14 tr|A9PH07|A9PH07_POPTR Putative uncharacterized protein OS=Popul... 81 5e-14 tr|A5AVL8|A5AVL8_VITVI Putative uncharacterized protein OS=Vitis... 80 6e-14 tr|Q9FI03|Q9FI03_ARATH Similarity to harpin-induced protein (At5... 80 1e-13 tr|Q1JUZ3|Q1JUZ3_IPONI Hairpin-induced family protein OS=Ipomoea... 79 2e-13 tr|Q8LD98|Q8LD98_ARATH Putative uncharacterized protein OS=Arabi... 77 9e-13 tr|A9P0D8|A9P0D8_PICSI Putative uncharacterized protein OS=Picea... 76 2e-12 tr|A9P136|A9P136_PICSI Putative uncharacterized protein OS=Picea... 75 2e-12 tr|A7QEV2|A7QEV2_VITVI Chromosome chr16 scaffold_86, whole genom... 75 2e-12 tr|Q9FIV4|Q9FIV4_ARATH Gb|AAF23842.1 OS=Arabidopsis thaliana PE=... 75 3e-12 tr|Q6JJ32|Q6JJ32_IPOTF Putative uncharacterized protein OS=Ipomo... 75 3e-12 tr|B2KL74|B2KL74_VITVI NDR1/HIN1-like protein OS=Vitis vinifera ... 75 3e-12 tr|A9NWB5|A9NWB5_PICSI Putative uncharacterized protein OS=Picea... 75 3e-12 tr|A9NYU7|A9NYU7_PICSI Putative uncharacterized protein OS=Picea... 75 4e-12 tr|A9NK56|A9NK56_PICSI Putative uncharacterized protein OS=Picea... 74 6e-12 tr|A7PAX7|A7PAX7_VITVI Chromosome chr16 scaffold_10, whole genom... 74 6e-12 tr|A3C5Z3|A3C5Z3_ORYSJ Putative uncharacterized protein OS=Oryza... 74 6e-12 tr|A2Z8T0|A2Z8T0_ORYSI Putative uncharacterized protein OS=Oryza... 74 6e-12 tr|A9RSB4|A9RSB4_PHYPA Predicted protein OS=Physcomitrella paten... 73 1e-11 tr|A7QUP0|A7QUP0_VITVI Chromosome chr10 scaffold_179, whole geno... 73 1e-11 tr|B8LMX4|B8LMX4_PICSI Putative uncharacterized protein OS=Picea... 72 2e-11 tr|B0ZC11|B0ZC11_CASGL Hairpin-inducing protein OS=Casuarina gla... 72 2e-11 tr|A9SWG8|A9SWG8_PHYPA Predicted protein (Fragment) OS=Physcomit... 72 2e-11
>tr|A9S624|A9S624_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181590 PE=4 SV=1 Length = 220
Score = 104 bits (260), Expect = 3e-21 Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 LNAD+ + ++A NPNKKIGI YD +D+ Y+ Q G +IP FYQGHQN T + + Sbjct: 89 LNADILYTITANNPNKKIGIKYDNIDIQSSYDGQVFGRSTIPGFYQGHQNITTITSEVLV 148
Query: 398 QDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEMS-NP 222 D ALT + +TL + + ++S+ LH R AKV +K+GS+ S K ++DC+V M NP Sbjct: 149 NDYALTSTSATTLASQI--QSNSVPLHFRANAKVHVKIGSYTSPGFKVRVDCDVTMGVNP 206
>tr|A9NKZ0|A9NKZ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 205
Score = 92.0 bits (227), Expect = 2e-17 Identities = 46/113 (40%), Positives = 67/113 (59%) Frame = -1
Query: 581 LLNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMS 402 L+ A + FN++ +NPNKK+ IYYD +D L Y+D+ I SIP F+QGH+NTT L +S Sbjct: 70 LVTAKLLFNITTRNPNKKVAIYYDKIDALLLYDDEEIAWASIPPFFQGHKNTTFLHTPLS 129
Query: 401 GQDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDC 243 G V+L L+ L ++ + L R A++R KVG+WKS + C Sbjct: 130 GYLVSLQSDTSRDLK--LERSSGKVDLVFRLYARIRFKVGNWKSGHYTLSVKC 180
>tr|A9NNJ0|A9NNJ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 244
Score = 91.3 bits (225), Expect = 4e-17 Identities = 46/114 (40%), Positives = 63/114 (55%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 LNA + FN+S +NPNKKIGIYYD++ Y + IG +P FYQGH+NTT+L +S Sbjct: 111 LNATMQFNISVRNPNKKIGIYYDSIVARAIYRREKIGSNQLPVFYQGHKNTTVLSYPLSA 170
Query: 398 QDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNV 237 + L + L A A S+ + A V KVGSW +R + C+V Sbjct: 171 DSLPLNTGVSRNLLAD--KALGSVDMTVNVDAWVHFKVGSWTTRHHLMSVFCDV 222
>tr|A7PTL1|A7PTL1_VITVI Chromosome undetermined scaffold_30, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023399001 PE=4 SV=1 Length = 251
Score = 89.7 bits (221), Expect = 1e-16 Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 1/124 (0%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDA-VDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMS 402 L+A N++A+NPN KIGIYY+ +T+FY + EGS+P FYQGHQNTT+L + ++ Sbjct: 116 LSATFDVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELT 175
Query: 401 GQDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEMSNP 222 GQ T + +TLQ T SI L + VRIK+G K KF+ CN+ + N Sbjct: 176 GQTQNAT-GLLTTLQEQ--RETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNL 232
Query: 221 TAPN 210 A N Sbjct: 233 DANN 236
>tr|A9SYE8|A9SYE8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137413 PE=4 SV=1 Length = 212
Score = 87.8 bits (216), Expect = 4e-16 Identities = 49/124 (39%), Positives = 72/124 (58%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 LNA++ +N+ A N N KI ++A+ V Y Q G+ SIPAF QGH+N T L + Sbjct: 78 LNANIVYNIMASNRNGKIDFKHNAIAVHTSYGGQVFGQASIPAFSQGHRNVTTLTSELVV 137
Query: 398 QDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEMSNPT 219 + P+ T AT ++ S+ LHAR AKVR+KVG+ S A + ++DC+ + PT Sbjct: 138 NNFEFVPASLGTALATDVN-RGSVALHARGSAKVRVKVGAITSFAVRVRVDCDFTVKPPT 196
Query: 218 APNP 207 A +P Sbjct: 197 ATSP 200
>tr|A9U1X7|A9U1X7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173224 PE=4 SV=1 Length = 278
Score = 82.0 bits (201), Expect = 2e-14 Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 ++ D+ F + A NPNKKI I Y V+V + Y N+G+ +IP +YQ NTT L + Sbjct: 143 VDTDILFTIHASNPNKKIRIDYKKVNVQMTYLGANVGKAAIPGWYQEVANTTTLHSSILA 202
Query: 398 QDVALTPSIGSTLQATLLD-ATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEMSNP 222 +T S GS L LLD + + I L AR KV IK+ WK+ A +DCN ++ P Sbjct: 203 TRAPMTYSDGSAL---LLDISANDIPLDARIDTKVAIKMRDWKTPAVWIHVDCNFHVAPP 259
Query: 221 TAP 213 +AP Sbjct: 260 SAP 262
>tr|A9TYZ5|A9TYZ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152861 PE=4 SV=1 Length = 212
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/124 (33%), Positives = 66/124 (53%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 L+++V + V+A NPN KIGI Y+ + + Y QN+ + SIP FY GH+N TL S Sbjct: 79 LDSEVRYVVNANNPNGKIGIRYETITIDTVYMTQNLNQHSIPGFYHGHRNVTLKPASFST 138
Query: 398 QDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEMSNPT 219 + L P G+ L+ + AT + L R K +K+G+ + +++CNV + P Sbjct: 139 TGLPLDPGTGAILEGHI--ATGDVPLVMRVRVKFNLKIGAITTPTFTVKVNCNVHIKPPI 196
Query: 218 APNP 207 P Sbjct: 197 GTTP 200
>tr|A9NS79|A9NS79_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 81.6 bits (200), Expect = 3e-14 Identities = 35/112 (31%), Positives = 67/112 (59%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 + + FN+S++NPN+++GI+YD+++ + Y+ I S+P F+Q +NTT++ + G Sbjct: 86 ITTTMNFNISSRNPNERVGIFYDSMEALVLYDTVKIANASVPKFFQSQKNTTVISPVVRG 145
Query: 398 QDVALTPSIGSTLQATLLDATSSIFLHARTMAKVRIKVGSWKSRASKFQIDC 243 Q V + P + L+A L T + + + +A++R +V W SR K ++ C Sbjct: 146 QSVHVVPGTFTGLKAESL--TGQLVVEVKLIARIRFQVARWTSRHYKMRVSC 195
>tr|A9PH07|A9PH07_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 135
Score = 80.9 bits (198), Expect = 5e-14 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 2/116 (1%) Frame = -1
Query: 581 LLNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMS 402 +L ++ FNVS +NPNKKIGIYY+ V+ FYE Q G S+ FYQGH+NTT+L + + Sbjct: 1 MLRYNLAFNVSIRNPNKKIGIYYNRVEAKAFYEGQRFGYSSLTPFYQGHKNTTVLNVVFT 60
Query: 401 G-QDVALTPSIGSTLQATLLDATSSIFLHARTMA-KVRIKVGSWKSRASKFQIDCN 240 G Q V L G L+ + TS ++ A ++ +V+ K+G K+ K +++C+ Sbjct: 61 GTQPVTLQ---GEDLKQFNSEKTSGLYSIALELSLRVKFKLGKVKTARFKPKVECD 113
>tr|A5AVL8|A5AVL8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001444 PE=4 SV=1 Length = 199
Score = 80.5 bits (197), Expect = 6e-14 Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = -1
Query: 578 LNADVTFNVSAQNPNKKIGIYYDAVDVTLFYEDQNIGEGSIPAFYQGHQNTTLLLLHMSG 399 LNA F + A NPN+K+ IYYD+++V++ Y+DQ + + F+Q H+N T L + + Sbjct: 69 LNATFHFVLRAYNPNRKVSIYYDSMEVSVXYDDQTMASNGVQPFFQRHRNVTRLEVQLVA 128
Query: 398 QDVALTPSIGSTLQATLLDATS-SIFLHARTMAKVRIKVGSWKSRASKFQIDCNVEM 231 Q + L+ + L LD +S + L R A++R KVG WKS+ ++ C E+ Sbjct: 129 QSLLLSGPVSKDLH---LDRSSGKVELEVRVKARIRFKVGIWKSKHRTLRVFCLPEV 182
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