BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914053|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_D01.
         (522 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5DM57|IF172_CHLRE Intraflagellar transport protein 172 OS=Ch...    33   1.1  
sp|Q6PBN5|AUP1_DANRE Ancient ubiquitous protein 1 OS=Danio rerio...    31   4.0  
sp|P23186|MCBD_ECOLX Microcin B17-processing protein mcbD OS=Esc...    30   5.3  

>sp|Q5DM57|IF172_CHLRE Intraflagellar transport protein 172
            OS=Chlamydomonas reinhardtii GN=IFT172 PE=1 SV=1
          Length = 1755

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = -2

Query: 497  NDMTSKKSSRARRHHKMHVQKCEWSTVAEMSTIY--DFLSRYLGKHEHSSYKT*CKAQST 324
            +++ S+    A++  +M+V + EW+ V E++     +  S Y  KH    +K    AQ+ 
Sbjct: 1416 DELASRGGQHAQQAIEMYVARDEWAKVHELAAQQGPEVASNYALKHAERRFKQGDYAQAA 1475

Query: 323  VRMSSCIVSSERKFIGLSKSVLGEILH 243
               +   ++++ ++  L KS+   +LH
Sbjct: 1476 QVFAQHGITAQPQYFELYKSIAQGVLH 1502


>sp|Q6PBN5|AUP1_DANRE Ancient ubiquitous protein 1 OS=Danio rerio
           GN=aup1 PE=2 SV=2
          Length = 423

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 116 FSRGYTRRPISMQE-KIALYEYSQHGYI*NPGLNK 15
           F R    R +S+QE K ALYEY++  YI   GLNK
Sbjct: 385 FGRSPIDRHMSLQERKEALYEYARRRYIEKHGLNK 419


>sp|P23186|MCBD_ECOLX Microcin B17-processing protein mcbD
           OS=Escherichia coli GN=mcbD PE=4 SV=1
          Length = 396

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +1

Query: 169 CSQNFLSNHFSDIVLLESHQAHF*TC-RISPSTLLLNPINFLSDE---TMQDDIRTVD*A 336
           C  NFL   ++D  +++S+Q HF +C +    T L      LSD+   T++++I +    
Sbjct: 268 CLHNFLIGGYTDDDIIDSYQRHFMSCNKYESFTDLCENTVLLSDDVKLTLEENITSDTNL 327

Query: 337 LHYVL*LECSCFPRY 381
           L+Y+  +  + F  Y
Sbjct: 328 LNYLQQISDNIFVYY 342

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914053|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_D01.
         (522 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******