BP913968 |
Clone id |
YMU001_000038_D06 |
Library |
YMU01 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000038_D06. |
Accession |
BP913968 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGGCCGCTTCTTAGTACTGTCACTTGGAATCCCTCTTCCTTGGAAACTTCAAGCAATTTC TTGGGTGAAAAAGGTAACACTTCTGCAAATCTGAACCTGGAGCCCGATCTGAGCTCCACT AAACGACAAAAGTTTGAAGCATCCTTTCGGTCCTCAAAACCAACAACATGTCTCGCTTTC TGACCCTTTGTTCCTTCATTATCAATGGTCATGTCCAGACCATAGAGCCCTTCCCCTTCT TTGCTGGCTACCATCAAGCAATTGTGATTTTATGAAAACGTTTGTTGAGAGAGGAGCAAT CGCCCTCGATTACACCTTCCATCACATCCATCAACATAGTGGCTACAGTCTATCCACATA CCACATATCGAGTATCCACTTGTCCAAGAAAACCTTTTTTTCATCACCAGGAATCGAGGC AATAACCATTGTCTTCCATTTAGTGCATCCATGTCGTGAATGTGTACAAATCACCCAAGT CCCAATAGAAACCTTCCTCTGCCACTAGCACACAGCGAAGGTCAAGCCACCATAACTCGT CTCCTGCTTTAGGCTGATACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P09311 |
Definition |
sp|P09311|US10_VZVD Genes 64/69 protein OS=Varicella-zoster virus (strain Dumas) |
Align length |
50 |
Score (bit) |
33.5 |
E-value |
0.73 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SWE7 |
Definition |
tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
82 |
Score (bit) |
63.5 |
E-value |
7.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913968|Adiantum capillus-veneris mRNA, clone: YMU001_000038_D06. (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09 tr|Q9M360|Q9M360_ARATH Putative uncharacterized protein F15G16.1... 50 8e-05 tr|A9P102|A9P102_PICSI Putative uncharacterized protein OS=Picea... 45 0.003 tr|A7QWD9|A7QWD9_VITVI Chromosome undetermined scaffold_203, who... 45 0.003 tr|A5B9J8|A5B9J8_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003 tr|A4S702|A4S702_OSTLU Predicted protein OS=Ostreococcus lucimar... 36 1.2 tr|Q2T4Z9|Q2T4Z9_BURTA Chain a, crystal structure of nucleoside ... 35 2.8 tr|Q1YNU1|Q1YNU1_9GAMM Putative acyl-CoA dehydrogenase (Fragment... 34 4.7 tr|Q01BN0|Q01BN0_OSTTA Chromosome 04 contig 1, DNA sequence OS=O... 34 6.2 tr|O23433|O23433_ARATH Putative uncharacterized protein dl3950w ... 34 6.2 tr|Q9J3M9|Q9J3M9_HHV3 ORF64 OS=Human herpesvirus 3 PE=4 SV=1 33 8.1 tr|Q6QCQ9|Q6QCQ9_HHV3 Virion protein (Tegument protein) (Putativ... 33 8.1 tr|Q4JR15|Q4JR15_HHV3 ORF64 OS=Human herpesvirus 3 GN=ORF69 PE=4... 33 8.1 tr|Q4PC05|Q4PC05_USTMA Putative uncharacterized protein OS=Ustil... 33 8.1
>tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234231 PE=4 SV=1 Length = 1011
Score = 63.5 bits (153), Expect = 7e-09 Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Frame = -2
Query: 233 EGLYGLDMTIDNEGTKGQKA-----RHVVGFEDRKDASNFCRLVELRSGSRFRFAEVLPF 69 +G Y LDMT D G GQ H + F+D KDASNFC L+ S A+V+P Sbjct: 882 QGFYSLDMTPDFSGIVGQGKLERTYNHTIAFQDPKDASNFCGLLL----SERYMADVIPI 937
Query: 68 SPKKLLEVSKEEGFQVTVLRSG 3 PK L + K+EGF+VTV++ G Sbjct: 938 LPKDLYQDVKQEGFKVTVIKKG 959
>tr|Q9M360|Q9M360_ARATH Putative uncharacterized protein F15G16.170 OS=Arabidopsis thaliana GN=F15G16.170 PE=4 SV=1 Length = 1121
Score = 50.1 bits (118), Expect = 8e-05 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Frame = -2
Query: 257 LMVASKEGE---GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVE-----LRSG 102 L + GE G Y L+M D E K HV+ FED D N C +++ LRSG Sbjct: 964 LYTVDENGEQQVGFYTLEMATDLE--LEPKPHHVIAFEDAADCRNLCYIIQAHLDMLRSG 1021
Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3 + F ++P PK +K GF VTV+R G Sbjct: 1022 NVF----IVPRPPKDAYREAKANGFGVTVIRKG 1050
>tr|A9P102|A9P102_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 258
Score = 45.1 bits (105), Expect = 0.003 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -2
Query: 233 EGLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELR-SGSRFRFAEVLPFSPKK 57 +GLY L+M E H + F+D DA NFC +++ + V+P S K+ Sbjct: 130 KGLYSLEMVPGIESASKPGPYHTIAFQDHADARNFCYILQSHYNDLGDASVHVIPLSSKE 189
Query: 56 LLEVSKEEGFQVTVLRSG 3 E + F+VTV++ G Sbjct: 190 FYEEAMSTAFRVTVIKKG 207
>tr|A7QWD9|A7QWD9_VITVI Chromosome undetermined scaffold_203, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008617001 PE=4 SV=1 Length = 1084
Score = 45.1 bits (105), Expect = 0.003 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Frame = -2
Query: 260 CLMVASKEGE----GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRS---G 102 C+ + + E E G Y L+M D E K HV+ FED D N C +++ G Sbjct: 940 CIELYTTENEEHKVGFYSLEMAADLE--LEPKQYHVIAFEDPGDCKNLCYIIQAHMDMLG 997
Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3 + F P PK +K GF VTV+R G Sbjct: 998 NGHAFVVARP--PKDAFREAKGNGFSVTVIRKG 1028
>tr|A5B9J8|A5B9J8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009585 PE=4 SV=1 Length = 1243
Score = 45.1 bits (105), Expect = 0.003 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Frame = -2
Query: 260 CLMVASKEGE----GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRS---G 102 C+ + + E E G Y L+M D E K HV+ FED D N C +++ G Sbjct: 1085 CIELYTTENEEHKVGFYSLEMAADLE--LEPKQYHVIAFEDPGDCKNLCYIIQAHMDMLG 1142
Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3 + F P PK +K GF VTV+R G Sbjct: 1143 NGHAFVVARP--PKDAFREAKGNGFSVTVIRKG 1173
>tr|A4S702|A4S702_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_25460 PE=4 SV=1 Length = 353
Score = 36.2 bits (82), Expect = 1.2 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Frame = -2
Query: 227 LYGLDMTIDN--EGTKGQKARHVVGFEDRKDASNFCRLVELR------SGSRFRFAEVLP 72 L+ + M DN + + HV+ FE++ DA NFC ++ + + + Sbjct: 224 LFAMQMVPDNIPPRARPEDKFHVLAFENKSDAENFCFFMQSKREDEDLDDALRGLVTMTG 283
Query: 71 FSPKKLLEVSKEEGFQVTVLRSG 3 PK+L +V+ + G+ VTV+ +G Sbjct: 284 IGPKELQKVADDAGYGVTVVGAG 306
>tr|Q2T4Z9|Q2T4Z9_BURTA Chain a, crystal structure of nucleoside hydrolase from leishmania major OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=BTH_II1555 PE=4 SV=1 Length = 379
Score = 35.0 bits (79), Expect = 2.8 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2
Query: 290 RGAIALDYTFHHIHQHSGYSLSTYHISSIHLSKKTFFSSPGIE-AITIVFHLVHPCRECV 466 RG A +F H + + +H S+ L K + + PG++ ++ +VF ++HP E + Sbjct: 29 RGEAAARVSFDASHHRAAAACRAHHEISMSLHKIIYDTDPGVDDSMALVFQVLHPDIELI 88
Query: 467 QITQV 481 +T V Sbjct: 89 GVTSV 93
>tr|Q1YNU1|Q1YNU1_9GAMM Putative acyl-CoA dehydrogenase (Fragment) OS=gamma proteobacterium HTCC2207 GN=GB2207_04287 PE=4 SV=1 Length = 395
Score = 34.3 bits (77), Expect = 4.7 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Frame = -2
Query: 434 RQWLLPRFLVMKKRFSWTSGYSICGMWIDCSHYV-----DGCDGRCNRGRLLLSQQTFS* 270 + + LPR L K W GYS G D + + DG D N ++ S S Sbjct: 106 KNYYLPRMLSGKD--VWCQGYSEPGAGSDLASLMTAGVRDGDDYIINGSKIWTSYAQHSN 163
Query: 269 NHNCLMVASKEGEGLYGLDMTIDNEGTKGQKARHVVGFE 153 CL+ SKEG+ G+ + + KG +VG + Sbjct: 164 KIFCLVRTSKEGKPQAGISFILVDMDAKGLSVEPIVGLD 202
>tr|Q01BN0|Q01BN0_OSTTA Chromosome 04 contig 1, DNA sequence OS=Ostreococcus tauri GN=Ot04g00180 PE=4 SV=1 Length = 390
Score = 33.9 bits (76), Expect = 6.2 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Frame = -2
Query: 227 LYGLDMTIDN--EGTKGQKARHVVGFEDRKDASNFC------RLVELRSGSRFRFAEVLP 72 L+ + M D+ E + HV+ FE +KDA FC R E+ S + Sbjct: 262 LFAMQMVPDSIPERARPNDRFHVLAFESKKDAEKFCFFMQSKREDEILDDSLRGLTSMTG 321
Query: 71 FSPKKLLEVSKEEGFQVTVLRSG 3 PK+L +++ + + V+V+ +G Sbjct: 322 VGPKELQKIADDANYGVSVIGAG 344
>tr|O23433|O23433_ARATH Putative uncharacterized protein dl3950w (Putative uncharacterized protein AT4g15820) OS=Arabidopsis thaliana GN=dl3950w PE=4 SV=1 Length = 592
Score = 33.9 bits (76), Expect = 6.2 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = -2
Query: 233 EGLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRSGSRFRF-AEVLPFSPKK 57 EG + L T E +GQ + H++ FED+ DA NF L+E F A++ P + K Sbjct: 492 EGYFTL-RTESMEQNEGQVS-HMIAFEDQSDARNFSYLLESVFEDLDDFSADIAPVTTKD 549
Query: 56 LLEVSKEEGFQVTVLR 9 L E G V V+R Sbjct: 550 LYEEVSSGGKNVIVVR 565
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