BP913968
Clone id YMU001_000038_D06
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCCGCTTCTTAGTACTGTCACTTGGAATCCCTCTTCCTTGGAAACTTCAAGCAATTTC
TTGGGTGAAAAAGGTAACACTTCTGCAAATCTGAACCTGGAGCCCGATCTGAGCTCCACT
AAACGACAAAAGTTTGAAGCATCCTTTCGGTCCTCAAAACCAACAACATGTCTCGCTTTC
TGACCCTTTGTTCCTTCATTATCAATGGTCATGTCCAGACCATAGAGCCCTTCCCCTTCT
TTGCTGGCTACCATCAAGCAATTGTGATTTTATGAAAACGTTTGTTGAGAGAGGAGCAAT
CGCCCTCGATTACACCTTCCATCACATCCATCAACATAGTGGCTACAGTCTATCCACATA
CCACATATCGAGTATCCACTTGTCCAAGAAAACCTTTTTTTCATCACCAGGAATCGAGGC
AATAACCATTGTCTTCCATTTAGTGCATCCATGTCGTGAATGTGTACAAATCACCCAAGT
CCCAATAGAAACCTTCCTCTGCCACTAGCACACAGCGAAGGTCAAGCCACCATAACTCGT
CTCCTGCTTTAGGCTGATACT
■■Homology search results ■■ -
sp_hit_id P09311
Definition sp|P09311|US10_VZVD Genes 64/69 protein OS=Varicella-zoster virus (strain Dumas)
Align length 50
Score (bit) 33.5
E-value 0.73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913968|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D06.
(561 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P09311|US10_VZVD Genes 64/69 protein OS=Varicella-zoster viru... 33 0.73
sp|Q3TIT8|SPX3_MOUSE Sugar phosphate exchanger 3 OS=Mus musculus... 30 6.2
sp|Q53191|Y4TP_RHISN Probable peptide ABC transporter permease p... 30 8.1
sp|Q646F0|T2R39_PAPHA Taste receptor type 2 member 39 OS=Papio h... 30 8.1
sp|Q645S5|T2R39_MACMU Taste receptor type 2 member 39 OS=Macaca ... 30 8.1
sp|A3QFM9|MNMC_SHELP tRNA 5-methylaminomethyl-2-thiouridine bios... 30 8.1
sp|Q08907|FIT3_YEAST Facilitator of iron transport 3 OS=Saccharo... 30 8.2
sp|Q10024|DGKM_CAEEL Putative diacylglycerol kinase K06A1.6 OS=C... 30 8.2

>sp|P09311|US10_VZVD Genes 64/69 protein OS=Varicella-zoster virus
(strain Dumas) GN=64 PE=3 SV=1
Length = 180

Score = 33.5 bits (75), Expect = 0.73
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2

Query: 152 PQNQQHVSLSDPLFLHYQWSCPDHRALPLLCWLPSSNCDFMKTFVERGAI 301
P Q H+ LS+ L L W C H LP + P + C + + G I
Sbjct: 108 PDPQSHLELSERLILMAYWCCLGHAGLPTIGLSPDNKCIRAELYDRPGGI 157


>sp|Q3TIT8|SPX3_MOUSE Sugar phosphate exchanger 3 OS=Mus musculus
GN=Slc37a3 PE=2 SV=1
Length = 494

Score = 30.4 bits (67), Expect = 6.2
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2

Query: 281 FVERGAIALDYTFHHIHQHSGYSLSTYHISSIHLSKKTF 397
F++RGA+ ++ HH+ + + L+ + S +H S+KTF
Sbjct: 6 FLQRGALLTSFSHHHL---AVFLLTFFSYSLLHASRKTF 41


>sp|Q53191|Y4TP_RHISN Probable peptide ABC transporter permease
protein y4tP OS=Rhizobium sp. (strain NGR234) GN=y4tP
PE=3 SV=2
Length = 313

Score = 30.0 bits (66), Expect = 8.1
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2

Query: 266 DFMKTFVERGAIALDYTFHHIHQHSGYSLST-------YHISSIHLSKKTFFSSPGIEAI 424
D+M+T +GA FHH +++G + T Y I + L+ +T F+ PGI +
Sbjct: 211 DYMRTAAAKGASPFAMLFHHALKNAGVPILTVIGISFAYMIGGVVLT-ETVFNVPGIGRL 269

Query: 425 TI 430
+
Sbjct: 270 VV 271


>sp|Q646F0|T2R39_PAPHA Taste receptor type 2 member 39 OS=Papio
hamadryas GN=TAS2R39 PE=3 SV=1
Length = 338

Score = 30.0 bits (66), Expect = 8.1
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +2

Query: 173 SLSDPLFLHYQWSCPDHRALPLLCWLPSSNCDFMKTFVERGAIALDYTFHHIHQHSGYSL 352
+ S PLFL +W +P L WL I+ ++ I+ +GY
Sbjct: 141 NFSYPLFLKLRWRISG--LIPWLLWLSVF-------------ISFSHSMFCINICTGYCD 185

Query: 353 STYHISSIHLSKKTFFSSPGIEAITIVFHL 442
+++ I S + ++KT+FS + ++ F+L
Sbjct: 186 NSFPIHSSNSTEKTYFSEISVVSLAFFFNL 215


>sp|Q645S5|T2R39_MACMU Taste receptor type 2 member 39 OS=Macaca
mulatta GN=TAS2R39 PE=3 SV=1
Length = 338

Score = 30.0 bits (66), Expect = 8.1
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +2

Query: 173 SLSDPLFLHYQWSCPDHRALPLLCWLPSSNCDFMKTFVERGAIALDYTFHHIHQHSGYSL 352
+ S PLFL +W +P L WL I+ ++ I+ +GY
Sbjct: 141 NFSYPLFLKLRWRISG--LIPWLLWLSVF-------------ISFSHSMFCINICTGYCD 185

Query: 353 STYHISSIHLSKKTFFSSPGIEAITIVFHL 442
+++ I S + ++KT+FS + ++ F+L
Sbjct: 186 NSFPIHSSNSTEKTYFSEISVVSLAFFFNL 215


>sp|A3QFM9|MNMC_SHELP tRNA 5-methylaminomethyl-2-thiouridine
biosynthesis bifunctional protein mnmC OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=mnmC PE=3 SV=1
Length = 686

Score = 30.0 bits (66), Expect = 8.1
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +2

Query: 119 LNDKSLKHPFGPQNQQHVSLSDPLFLHYQWSCPDHRALPLLCWLPSSNCDFMKTFVERGA 298
+N + +HP QN + D +F H + H + ++ LPSS+ ++ +
Sbjct: 8 VNSLATEHPNNAQNSDKMPTFDAIFSHLS-AIASHNSHQIIALLPSSDANWPAALIAERL 66

Query: 299 IALDYTFHHIHQHSGYSLSTYHISS--IHLSKKTFFSSPGIEAITIV 433
H QH L H +S L++ +SP E I +
Sbjct: 67 TQAGSKQHLQKQHLHLHLFAQHQASWLKALAESETLASPAKEQIKAI 113


>sp|Q08907|FIT3_YEAST Facilitator of iron transport 3
OS=Saccharomyces cerevisiae GN=FIT3 PE=2 SV=1
Length = 204

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1

Query: 13 STVTWNPSSLETSSNFLGEKGNTSANLNLEPDLSSTKRQKFEAS 144
S+ TW+PSS TSS +T+A E S+T E S
Sbjct: 135 SSNTWSPSSTSTSSEAATSSASTTATTTAETSSSATSSSTAELS 178


>sp|Q10024|DGKM_CAEEL Putative diacylglycerol kinase K06A1.6
OS=Caenorhabditis elegans GN=K06A1.6 PE=2 SV=2
Length = 937

Score = 30.0 bits (66), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1

Query: 192 NKGSES-ETCCWF*GPKGCFKLLSFSGAQIGLQV 94
NKGS++ T CW P+ F + S G + GL++
Sbjct: 430 NKGSKALHTLCWLLNPRQVFDITSLKGPKFGLEM 463


tr_hit_id A9SWE7
Definition tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 82
Score (bit) 63.5
E-value 7.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913968|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D06.
(561 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09
tr|Q9M360|Q9M360_ARATH Putative uncharacterized protein F15G16.1... 50 8e-05
tr|A9P102|A9P102_PICSI Putative uncharacterized protein OS=Picea... 45 0.003
tr|A7QWD9|A7QWD9_VITVI Chromosome undetermined scaffold_203, who... 45 0.003
tr|A5B9J8|A5B9J8_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003
tr|A4S702|A4S702_OSTLU Predicted protein OS=Ostreococcus lucimar... 36 1.2
tr|Q2T4Z9|Q2T4Z9_BURTA Chain a, crystal structure of nucleoside ... 35 2.8
tr|Q1YNU1|Q1YNU1_9GAMM Putative acyl-CoA dehydrogenase (Fragment... 34 4.7
tr|Q01BN0|Q01BN0_OSTTA Chromosome 04 contig 1, DNA sequence OS=O... 34 6.2
tr|O23433|O23433_ARATH Putative uncharacterized protein dl3950w ... 34 6.2
tr|Q9J3M9|Q9J3M9_HHV3 ORF64 OS=Human herpesvirus 3 PE=4 SV=1 33 8.1
tr|Q6QCQ9|Q6QCQ9_HHV3 Virion protein (Tegument protein) (Putativ... 33 8.1
tr|Q4JR15|Q4JR15_HHV3 ORF64 OS=Human herpesvirus 3 GN=ORF69 PE=4... 33 8.1
tr|Q4PC05|Q4PC05_USTMA Putative uncharacterized protein OS=Ustil... 33 8.1

>tr|A9SWE7|A9SWE7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234231 PE=4 SV=1
Length = 1011

Score = 63.5 bits (153), Expect = 7e-09
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Frame = -2

Query: 233 EGLYGLDMTIDNEGTKGQKA-----RHVVGFEDRKDASNFCRLVELRSGSRFRFAEVLPF 69
+G Y LDMT D G GQ H + F+D KDASNFC L+ S A+V+P
Sbjct: 882 QGFYSLDMTPDFSGIVGQGKLERTYNHTIAFQDPKDASNFCGLLL----SERYMADVIPI 937

Query: 68 SPKKLLEVSKEEGFQVTVLRSG 3
PK L + K+EGF+VTV++ G
Sbjct: 938 LPKDLYQDVKQEGFKVTVIKKG 959


>tr|Q9M360|Q9M360_ARATH Putative uncharacterized protein F15G16.170
OS=Arabidopsis thaliana GN=F15G16.170 PE=4 SV=1
Length = 1121

Score = 50.1 bits (118), Expect = 8e-05
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = -2

Query: 257 LMVASKEGE---GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVE-----LRSG 102
L + GE G Y L+M D E K HV+ FED D N C +++ LRSG
Sbjct: 964 LYTVDENGEQQVGFYTLEMATDLE--LEPKPHHVIAFEDAADCRNLCYIIQAHLDMLRSG 1021

Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3
+ F ++P PK +K GF VTV+R G
Sbjct: 1022 NVF----IVPRPPKDAYREAKANGFGVTVIRKG 1050


>tr|A9P102|A9P102_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 258

Score = 45.1 bits (105), Expect = 0.003
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2

Query: 233 EGLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELR-SGSRFRFAEVLPFSPKK 57
+GLY L+M E H + F+D DA NFC +++ + V+P S K+
Sbjct: 130 KGLYSLEMVPGIESASKPGPYHTIAFQDHADARNFCYILQSHYNDLGDASVHVIPLSSKE 189

Query: 56 LLEVSKEEGFQVTVLRSG 3
E + F+VTV++ G
Sbjct: 190 FYEEAMSTAFRVTVIKKG 207


>tr|A7QWD9|A7QWD9_VITVI Chromosome undetermined scaffold_203, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00008617001 PE=4 SV=1
Length = 1084

Score = 45.1 bits (105), Expect = 0.003
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = -2

Query: 260 CLMVASKEGE----GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRS---G 102
C+ + + E E G Y L+M D E K HV+ FED D N C +++ G
Sbjct: 940 CIELYTTENEEHKVGFYSLEMAADLE--LEPKQYHVIAFEDPGDCKNLCYIIQAHMDMLG 997

Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3
+ F P PK +K GF VTV+R G
Sbjct: 998 NGHAFVVARP--PKDAFREAKGNGFSVTVIRKG 1028


>tr|A5B9J8|A5B9J8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_009585 PE=4 SV=1
Length = 1243

Score = 45.1 bits (105), Expect = 0.003
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = -2

Query: 260 CLMVASKEGE----GLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRS---G 102
C+ + + E E G Y L+M D E K HV+ FED D N C +++ G
Sbjct: 1085 CIELYTTENEEHKVGFYSLEMAADLE--LEPKQYHVIAFEDPGDCKNLCYIIQAHMDMLG 1142

Query: 101 SRFRFAEVLPFSPKKLLEVSKEEGFQVTVLRSG 3
+ F P PK +K GF VTV+R G
Sbjct: 1143 NGHAFVVARP--PKDAFREAKGNGFSVTVIRKG 1173


>tr|A4S702|A4S702_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_25460 PE=4 SV=1
Length = 353

Score = 36.2 bits (82), Expect = 1.2
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = -2

Query: 227 LYGLDMTIDN--EGTKGQKARHVVGFEDRKDASNFCRLVELR------SGSRFRFAEVLP 72
L+ + M DN + + HV+ FE++ DA NFC ++ + + +
Sbjct: 224 LFAMQMVPDNIPPRARPEDKFHVLAFENKSDAENFCFFMQSKREDEDLDDALRGLVTMTG 283

Query: 71 FSPKKLLEVSKEEGFQVTVLRSG 3
PK+L +V+ + G+ VTV+ +G
Sbjct: 284 IGPKELQKVADDAGYGVTVVGAG 306


>tr|Q2T4Z9|Q2T4Z9_BURTA Chain a, crystal structure of nucleoside
hydrolase from leishmania major OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=BTH_II1555 PE=4 SV=1
Length = 379

Score = 35.0 bits (79), Expect = 2.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2

Query: 290 RGAIALDYTFHHIHQHSGYSLSTYHISSIHLSKKTFFSSPGIE-AITIVFHLVHPCRECV 466
RG A +F H + + +H S+ L K + + PG++ ++ +VF ++HP E +
Sbjct: 29 RGEAAARVSFDASHHRAAAACRAHHEISMSLHKIIYDTDPGVDDSMALVFQVLHPDIELI 88

Query: 467 QITQV 481
+T V
Sbjct: 89 GVTSV 93


>tr|Q1YNU1|Q1YNU1_9GAMM Putative acyl-CoA dehydrogenase (Fragment)
OS=gamma proteobacterium HTCC2207 GN=GB2207_04287 PE=4
SV=1
Length = 395

Score = 34.3 bits (77), Expect = 4.7
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = -2

Query: 434 RQWLLPRFLVMKKRFSWTSGYSICGMWIDCSHYV-----DGCDGRCNRGRLLLSQQTFS* 270
+ + LPR L K W GYS G D + + DG D N ++ S S
Sbjct: 106 KNYYLPRMLSGKD--VWCQGYSEPGAGSDLASLMTAGVRDGDDYIINGSKIWTSYAQHSN 163

Query: 269 NHNCLMVASKEGEGLYGLDMTIDNEGTKGQKARHVVGFE 153
CL+ SKEG+ G+ + + KG +VG +
Sbjct: 164 KIFCLVRTSKEGKPQAGISFILVDMDAKGLSVEPIVGLD 202


>tr|Q01BN0|Q01BN0_OSTTA Chromosome 04 contig 1, DNA sequence
OS=Ostreococcus tauri GN=Ot04g00180 PE=4 SV=1
Length = 390

Score = 33.9 bits (76), Expect = 6.2
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = -2

Query: 227 LYGLDMTIDN--EGTKGQKARHVVGFEDRKDASNFC------RLVELRSGSRFRFAEVLP 72
L+ + M D+ E + HV+ FE +KDA FC R E+ S +
Sbjct: 262 LFAMQMVPDSIPERARPNDRFHVLAFESKKDAEKFCFFMQSKREDEILDDSLRGLTSMTG 321

Query: 71 FSPKKLLEVSKEEGFQVTVLRSG 3
PK+L +++ + + V+V+ +G
Sbjct: 322 VGPKELQKIADDANYGVSVIGAG 344


>tr|O23433|O23433_ARATH Putative uncharacterized protein dl3950w
(Putative uncharacterized protein AT4g15820)
OS=Arabidopsis thaliana GN=dl3950w PE=4 SV=1
Length = 592

Score = 33.9 bits (76), Expect = 6.2
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -2

Query: 233 EGLYGLDMTIDNEGTKGQKARHVVGFEDRKDASNFCRLVELRSGSRFRF-AEVLPFSPKK 57
EG + L T E +GQ + H++ FED+ DA NF L+E F A++ P + K
Sbjct: 492 EGYFTL-RTESMEQNEGQVS-HMIAFEDQSDARNFSYLLESVFEDLDDFSADIAPVTTKD 549

Query: 56 LLEVSKEEGFQVTVLR 9
L E G V V+R
Sbjct: 550 LYEEVSSGGKNVIVVR 565