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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913884
Clone id YMU001_000037_D11
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCTAATGAGTTCGACTTCTCTGAAGAGAAAAGAGCGAGCGTAGCACATAGTGAACAAGCA
AGGCATAGGCATGGTGAGAAGAGGTGAAGCAAAAAGTAACTTCCTCTAGGGAAAACCGAT
GCTGGCGACCTCCTTCCAGGTTCGTGACAGCCTGCTCATGGGCTCATGGGACTGGAGGCT
CGTATAAAGTACATAAAGAACTATCCGGTGCAGTTGGGTATGGTGGGACAACCAATAGAA
GAAGTCCATTGAGGTGGGTTTGTTGATGTACAATAGGTGCGCATTGGCGAGCATTAGTTT
GGAGGAGTTTCTCATAAGAGGAGTTTCTCATAAGACGTCGAGATATTCCAGGATATGGTA
GCTCTTATTTCTGTGATGCCTGTTGCAATTTGTTACTCTGCACATGATCACTTTGAGTAT
GAGCCACACACCAAGATGGTTACTAGTGGTGCAAACCAATGGGCTCCAATTTAGGTAGAG
GTTGGGTAAAATGTTCACAACTGGTGCTCGTCTCGGCGA
■■Homology search results ■■ -
sp_hit_id Q9JVA8
Definition sp|Q9JVA8|LNT_NEIMA Apolipoprotein N-acyltransferase OS=Neisseria meningitidis serogroup A
Align length 84
Score (bit) 35.4
E-value 0.16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913884|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_D11.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JVA8|LNT_NEIMA Apolipoprotein N-acyltransferase OS=Neisseri...    35   0.16 
sp|Q9K0A2|LNT_NEIMB Apolipoprotein N-acyltransferase OS=Neisseri...    33   0.61 
sp|Q91610|DHH1_XENLA Desert hedgehog protein 1 OS=Xenopus laevis...    28   1.0  
sp|Q39PS9|TOLB_GEOMG Protein tolB OS=Geobacter metallireducens (...    30   6.8  
sp|A6RSP5|KYNU_BOTFB Kynureninase OS=Botryotinia fuckeliana (str...    30   8.8  

>sp|Q9JVA8|LNT_NEIMA Apolipoprotein N-acyltransferase OS=Neisseria
           meningitidis serogroup A GN=lnt PE=3 SV=1
          Length = 512

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = +2

Query: 209 CSWVWWDNQ*KKSIEVGLLMYNRCALASISLEEFLIRGVSHKTSRYSRIWXXXXXXXXXQ 388
           C W+W      + I++GL++     L   + E FL  G       YS+I           
Sbjct: 109 CFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFL-TGFGWGAIGYSQITPDSPLAGFAP 167

Query: 389 FVTLHMITLSMSHTPRWLLVVQTN 460
           F  +HM+TL+ +    WL++   N
Sbjct: 168 FGGIHMVTLATAFLGVWLVLASDN 191


>sp|Q9K0A2|LNT_NEIMB Apolipoprotein N-acyltransferase OS=Neisseria
           meningitidis serogroup B GN=lnt PE=3 SV=2
          Length = 512

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +2

Query: 209 CSWVWWDNQ*KKSIEVGLLMYNRCALASISLEEFLIRGVSHKTSRYSRIWXXXXXXXXXQ 388
           C W+W      + I++GL++     L   + E FL  G       YS+I           
Sbjct: 109 CFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFL-TGFGWGAIGYSQITPDSPLAGFAP 167

Query: 389 FVTLHMITLSMSHTPRWLLVVQTN 460
              +HM+TL+ +    WL++   N
Sbjct: 168 LGGIHMVTLATAFLGVWLVLASNN 191


>sp|Q91610|DHH1_XENLA Desert hedgehog protein 1 OS=Xenopus laevis
           GN=chh PE=2 SV=1
          Length = 396

 Score = 27.7 bits (60), Expect(2) = 1.0
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 303 SKLMLANAHLLYINKPTSMDFFYWLSHHTQLHRIV-LYVLYTSLQS 169
           SKL++   HLL+I   +S  F    ++  Q+  +V +YV  T +QS
Sbjct: 262 SKLLVTPNHLLFIQSSSSAGFLPTFAYRVQIGDLVQIYVNGTQVQS 307



 Score = 23.1 bits (48), Expect(2) = 1.0
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 145 TNLEGGRQHRFSLEEVTFCFTSSHHAYALLVHYVLRSLFSLQRSRT 8
           T ++  +  R SLEE T  +        LLV  VL S ++   S T
Sbjct: 303 TQVQSSKVVRVSLEEQTGVYAPMTEHGTLLVDGVLTSCYATVESHT 348


>sp|Q39PS9|TOLB_GEOMG Protein tolB OS=Geobacter metallireducens
           (strain GS-15 / ATCC 53774 / DSM 7210) GN=tolB PE=3 SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +3

Query: 105 SRENRCWRPPSRFVTACSWAHGTGGSYKVHKELSGAVGYGGTTNRRSPLRW 257
           S E+  W P  RF+T  S   G  G Y +  + SG     G   R S   W
Sbjct: 375 SNEHPRWSPDGRFITFSSTRGGGEGIYVMRADGSGQTRVSGGKGRDSHPTW 425


>sp|A6RSP5|KYNU_BOTFB Kynureninase OS=Botryotinia fuckeliana (strain
           B05.10) GN=bna5 PE=3 SV=1
          Length = 475

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
 Frame = -3

Query: 322 SSYEKLLQTNARQCAPIVHQQ--------THLNGLLLLVVPPYPTAPDSSLCTLYEPPVP 167
           + ++ L +  A+QCAPIV  +        T    L LL+   Y   P+ S   +     P
Sbjct: 112 TQWQLLAEHAAKQCAPIVGAKASEVAIMGTLTTNLHLLMASFYTPTPEKSKIIMEWKAFP 171

Query: 166 *AHEQAVTNLEGGRQHRFSLEEVTFCFTSSHHAYALLVHYVLRSL 32
             H    + + G   H ++ EE          +Y +    +LR++
Sbjct: 172 SDHYAIESQIRG---HGYNPEEAMVMIAPDEGSYEISTEKILRTI 213
tr_hit_id B4KC27
Definition tr|B4KC27|B4KC27_DROMO GI10793 OS=Drosophila mojavensis
Align length 61
Score (bit) 35.0
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913884|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_D11.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4KC27|B4KC27_DROMO GI10793 OS=Drosophila mojavensis GN=GI107...    35   2.2  
tr|A6TL52|A6TL52_ALKMQ Putative uncharacterized protein OS=Alkal...    35   2.9  
tr|B4JSA5|B4JSA5_DROGR GH18486 OS=Drosophila grimshawi GN=GH1848...    35   2.9  
tr|Q2GRX8|Q2GRX8_CHAGB Putative uncharacterized protein OS=Chaet...    33   6.5  
tr|A3YYY4|A3YYY4_9SYNE Magnesium-chelatase, subunit H OS=Synecho...    33   6.5  
tr|A7QCJ9|A7QCJ9_VITVI Chromosome chr12 scaffold_78, whole genom...    33   6.5  
tr|A9M368|A9M368_NEIM0 Apolipoprotein N-acyltransferase OS=Neiss...    33   8.5  
tr|A1KSX5|A1KSX5_NEIMF Putative apolipoprotein N-acyltransferase...    33   8.5  
tr|A3IMB2|A3IMB2_9CHRO Magnesium-chelatase, subunit H OS=Cyanoth...    33   8.5  

>tr|B4KC27|B4KC27_DROMO GI10793 OS=Drosophila mojavensis GN=GI10793
           PE=4 SV=1
          Length = 2103

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -1

Query: 504 PVVNILPNLYLNWSPLVCTTSN---HLGVWLILKVIMCRVTNCNRHHRNKSYHILEYLDV 334
           P+  IL +LYL+         N   HL + L L +IMC+    NR   NK+  IL+YLDV
Sbjct: 622 PIEGILYSLYLSIQDRSSEDVNVLDHLSITLELILIMCKE---NRAFVNKTSQILDYLDV 678

Query: 333 L 331
           L
Sbjct: 679 L 679


>tr|A6TL52|A6TL52_ALKMQ Putative uncharacterized protein
           OS=Alkaliphilus metalliredigens (strain QYMF)
           GN=Amet_0695 PE=4 SV=1
          Length = 207

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 24/111 (21%), Positives = 47/111 (42%)
 Frame = -1

Query: 495 NILPNLYLNWSPLVCTTSNHLGVWLILKVIMCRVTNCNRHHRNKSYHILEYLDVL*ETPL 316
           N+ P ++LN+  + C +  H         IM            K YH  + +D L E+P 
Sbjct: 117 NVKPVIHLNYHKIHCLSCRH--------TIM------------KRYHQAQLIDKLQESPQ 156

Query: 315 MRNSSKLMLANAHLLYINKPTSMDFFYWLSHHTQLHRIVLYVLYTSLQSHE 163
           + ++   ++     +Y +  T+ D+         +  ++LYVL +  Q +E
Sbjct: 157 LHHNQSKVIHEEPAMYYSTTTNADYQKLAHRFDMIVEVLLYVLISISQKNE 207


>tr|B4JSA5|B4JSA5_DROGR GH18486 OS=Drosophila grimshawi GN=GH18486
           PE=4 SV=1
          Length = 2065

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -1

Query: 504 PVVNILPNLYL---NWSPLVCTTSNHLGVWLILKVIMCRVTNCNRHHRNKSYHILEYLDV 334
           P+ +IL +LYL   N          HL V L L +IMC+    NR   NK+  IL+YLDV
Sbjct: 586 PIESILYSLYLSIQNKQEQGVNVLAHLSVTLDLILIMCKD---NRAFVNKTSQILDYLDV 642

Query: 333 L 331
           L
Sbjct: 643 L 643


>tr|Q2GRX8|Q2GRX8_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_09276 PE=3 SV=1
          Length = 544

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 321 PLMRNSSKLMLANAHLLYINKPTSMDFFYWLSHH 220
           P + N++KL L     LYI+KP + DF  WL  +
Sbjct: 136 PFVDNTTKLFLKQTERLYIDKPGTCDFTQWLQFY 169


>tr|A3YYY4|A3YYY4_9SYNE Magnesium-chelatase, subunit H
            OS=Synechococcus sp. WH 5701 GN=WH5701_11029 PE=4 SV=1
          Length = 1260

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 162  AHGTGGSYKVHKELSGAVGYGGTTNRRSPLRWV 260
            A G+GG+Y++ + ++  +G+GGT+  R P  WV
Sbjct: 1158 AMGSGGAYEISQRMTALIGWGGTSGFRDP--WV 1188


>tr|A7QCJ9|A7QCJ9_VITVI Chromosome chr12 scaffold_78, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00035428001
           PE=4 SV=1
          Length = 437

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 365 RATISWNISTSYEKLLL*ETPPN*CSPMRTYCTSTNPPQWTSSIGCPTIP 216
           +A ++WN+S SY + L   T P  C  +  +  ST  P    S GC  IP
Sbjct: 200 QALMTWNVSCSYSQFLA-STAPTCCVSLSAFYNSTIVPCPQCSCGCEGIP 248


>tr|A9M368|A9M368_NEIM0 Apolipoprotein N-acyltransferase
           OS=Neisseria meningitidis serogroup C (strain 053442)
           GN=lnt PE=4 SV=1
          Length = 524

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +2

Query: 209 CSWVWWDNQ*KKSIEVGLLMYNRCALASISLEEFLIRGVSHKTSRYSRIWXXXXXXXXXQ 388
           C W+W      + I++GL++     L   + E FL  G       YS+I           
Sbjct: 121 CFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFL-TGFGWGAIGYSQITPDSPLAGFAP 179

Query: 389 FVTLHMITLSMSHTPRWLLVVQTN 460
              +HM+TL+ +    WL++   N
Sbjct: 180 LGGIHMVTLATAFLGVWLVLASDN 203


>tr|A1KSX5|A1KSX5_NEIMF Putative apolipoprotein N-acyltransferase
           OS=Neisseria meningitidis serogroup C / serotype 2a
           (strain ATCC 700532 / FAM18) GN=lnt PE=4 SV=1
          Length = 514

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +2

Query: 209 CSWVWWDNQ*KKSIEVGLLMYNRCALASISLEEFLIRGVSHKTSRYSRIWXXXXXXXXXQ 388
           C W+W      + I++GL++     L   + E FL  G       YS+I           
Sbjct: 111 CFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFL-TGFGWGAIGYSQITPDSPLAGFAP 169

Query: 389 FVTLHMITLSMSHTPRWLLVVQTN 460
              +HM+TL+ +    WL++   N
Sbjct: 170 LGGIHMVTLATAFLGVWLVLASDN 193


>tr|A3IMB2|A3IMB2_9CHRO Magnesium-chelatase, subunit H OS=Cyanothece
            sp. CCY 0110 GN=CY0110_28019 PE=4 SV=1
          Length = 1240

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 168  GTGGSYKVHKELSGAVGYGGTTNRRSPLRWV 260
            G+GG+Y+V + ++  +G+GGTTN +    WV
Sbjct: 1144 GSGGAYEVSQRMTALIGWGGTTNFKD--NWV 1172