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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913659
Clone id YMU001_000032_G12
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAAAGAGTGAGGGTGTTAGAGAGTGCAAGTGCACTTTCAATAGGAACCTTTGCAACTTT
GCTGATGGAAGTTGCACTTCGGCTTGACTACGTTGTAGAAGCTGTGGAGGAGCTAGGTAA
GCTGGCAAACTTCAAAGATCCAGAGCACAGGTTGCCATTAAGATTAATGGAGGTGTGAAA
CTTGAAGGCAAAGTAGAGGGCATATACAGTCGCAAGCAAGAACACAAGAGTCTTTTTTAG
GTATTTGGTTGCTCATACTTGTAGCAATAGAAGCCAAGTGCAGAAGAGGCACTTATGTAC
TAAACCTTTTCCCTCTAGCTTGTCCCATGTGCATACAGACGCATTCGCTGAAGTTTTGAG
TTTTGAGGGAAGGGCAGCATGCCGTGAGCGGTCATGCGAATGTTGATGAGCGAGGCATCA
CATAGATGCTTCTGGTGCTTTTCCATTTATATTCATCCAGGTATGTTGCTGGTAGGTTCA
AAGAATCTATCTGTA
■■Homology search results ■■ -
sp_hit_id A8FFD1
Definition sp|A8FFD1|DNAJ_BACP2 Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032)
Align length 46
Score (bit) 31.2
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913659|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_G12.
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8FFD1|DNAJ_BACP2 Chaperone protein dnaJ OS=Bacillus pumilus ...    31   2.8  
sp|Q5WHG0|DNAJ_BACSK Chaperone protein dnaJ OS=Bacillus clausii ...    30   6.1  

>sp|A8FFD1|DNAJ_BACP2 Chaperone protein dnaJ OS=Bacillus pumilus
           (strain SAFR-032) GN=dnaJ PE=3 SV=1
          Length = 377

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 40  NRNLCNFADGSCTSA*LRCRSCGGAR*AGKLQRSRAQVAIKINGGV 177
           NR +CN+  G+      +C +CGG   +GK+ R R ++ + I  GV
Sbjct: 186 NRRVCNYCSGTGKQIDHKCSTCGG---SGKV-RKRKKINVTIPAGV 227


>sp|Q5WHG0|DNAJ_BACSK Chaperone protein dnaJ OS=Bacillus clausii
           (strain KSM-K16) GN=dnaJ PE=3 SV=1
          Length = 372

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 40  NRNLCNFADGSCTSA*LRCRSCGGAR*AGKLQRSRAQVAIKINGGVKLEGKVEG 201
           NR +CN+ +G+      +C +C G     K ++   QV   I+ G +L    +G
Sbjct: 181 NRRVCNYCEGTGKIIKQKCATCSGKGKVRKRKKINIQVPAGIDNGQQLRVAGQG 234
tr_hit_id B8A929
Definition tr|B8A929|B8A929_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 52
Score (bit) 58.2
E-value 2.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913659|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_G12.
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8A929|B8A929_ORYSI Putative uncharacterized protein OS=Oryza...    58   2e-07
tr|A2ZXL6|A2ZXL6_ORYSJ Putative uncharacterized protein OS=Oryza...    58   2e-07
tr|A7P360|A7P360_VITVI Chromosome chr1 scaffold_5, whole genome ...    53   7e-06
tr|A5C592|A5C592_VITVI Putative uncharacterized protein OS=Vitis...    53   7e-06
tr|Q9LS46|Q9LS46_ARATH Gb|AAF25997.1 (Putative uncharacterized p...    53   9e-06
tr|Q9LDE9|Q9LDE9_ORYSJ Putative uncharacterized protein P0483F08...    50   4e-05
tr|A2WM69|A2WM69_ORYSI Putative uncharacterized protein OS=Oryza...    50   4e-05
tr|Q5Z6M5|Q5Z6M5_ORYSJ Aluminum-activated malate transporter-lik...    50   6e-05
tr|B8B0D8|B8B0D8_ORYSI Putative uncharacterized protein OS=Oryza...    50   6e-05
tr|A3BAJ0|A3BAJ0_ORYSJ Putative uncharacterized protein OS=Oryza...    50   6e-05
tr|Q9SHM1|Q9SHM1_ARATH Putative uncharacterized protein At2g1747...    50   8e-05
tr|Q9SX23|Q9SX23_ARATH F24J5.16 OS=Arabidopsis thaliana GN=F24J5...    49   1e-04
tr|Q93Z29|Q93Z29_ARATH At1g68600/F24J5_14 OS=Arabidopsis thalian...    49   1e-04
tr|A7QNF7|A7QNF7_VITVI Chromosome chr2 scaffold_132, whole genom...    49   1e-04
tr|A7PGR9|A7PGR9_VITVI Chromosome chr17 scaffold_16, whole genom...    49   1e-04
tr|Q6YWQ1|Q6YWQ1_ORYSJ Putative aluminum-activated malate transp...    49   2e-04
tr|A3AB10|A3AB10_ORYSJ Putative uncharacterized protein OS=Oryza...    49   2e-04
tr|A2X989|A2X989_ORYSI Putative uncharacterized protein OS=Oryza...    49   2e-04
tr|Q9LS22|Q9LS22_ARATH Genomic DNA, chromosome 5, BAC clone:F10E...    48   2e-04
tr|Q5XV17|Q5XV17_ARATH Putative uncharacterized protein OS=Arabi...    48   2e-04
tr|Q5XV16|Q5XV16_ARATH Putative uncharacterized protein OS=Arabi...    48   2e-04
tr|B3H4Y1|B3H4Y1_ARATH Uncharacterized protein At5g46610.3 OS=Ar...    48   2e-04
tr|Q8GX96|Q8GX96_ARATH Putative uncharacterized protein At4g1797...    48   3e-04
tr|O49696|O49696_ARATH Putative uncharacterized protein AT4g1797...    48   3e-04
tr|Q5FAM2|Q5FAM2_BRAOL Putative expressed protein OS=Brassica ol...    46   8e-04
tr|Q9C6L8|Q9C6L8_ARATH Putative uncharacterized protein F2J7.18 ...    46   0.001
tr|A7P361|A7P361_VITVI Chromosome chr1 scaffold_5, whole genome ...    46   0.001
tr|Q9LS23|Q9LS23_ARATH Genomic DNA, chromosome 5, BAC clone:F10E...    45   0.001
tr|Q9LPQ8|Q9LPQ8_ARATH F15H18.9 OS=Arabidopsis thaliana PE=4 SV=1      44   0.004
tr|Q5XV18|Q5XV18_ARATH Putative uncharacterized protein OS=Arabi...    44   0.005

>tr|B8A929|B8A929_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03658 PE=4 SV=1
          Length = 509

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +2

Query: 5   RVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDPEHRLPL 160
           RVR LES +ALS+ TFA+LL+E   RLD++V+AV+EL KLA F++    + L
Sbjct: 456 RVRALESTAALSLATFASLLLEFVARLDHLVDAVDELSKLAKFREESDSIKL 507


>tr|A2ZXL6|A2ZXL6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003288 PE=4 SV=1
          Length = 516

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +2

Query: 5   RVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDPEHRLPL 160
           RVR LES +ALS+ TFA+LL+E   RLD++V+AV+EL KLA F++    + L
Sbjct: 463 RVRALESTAALSLATFASLLLEFVARLDHLVDAVDELSKLAKFREESDSIKL 514


>tr|A7P360|A7P360_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030314001
           PE=4 SV=1
          Length = 583

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDP 142
           Q  +  ESAS+LS+ TF +LL+E   RL Y+V++ EEL +LA FKDP
Sbjct: 513 QESKTYESASSLSLATFTSLLIEFVARLQYLVDSFEELSELAKFKDP 559


>tr|A5C592|A5C592_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002161 PE=4 SV=1
          Length = 559

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDP 142
           Q  +  ESAS+LS+ TF +LL+E   RL Y+V++ EEL +LA FKDP
Sbjct: 489 QESKTYESASSLSLATFTSLLIEFVARLQYLVDSFEELSELAKFKDP 535


>tr|Q9LS46|Q9LS46_ARATH Gb|AAF25997.1 (Putative uncharacterized
           protein At3g18440) OS=Arabidopsis thaliana GN=At3g18440
           PE=2 SV=1
          Length = 598

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDPE 145
           +  +  ESASALS+ TFA+LL+E   RL  VV+A +EL + ANFK+PE
Sbjct: 524 ETTKTYESASALSLATFASLLIEFVARLQNVVDAFKELSQKANFKEPE 571


>tr|Q9LDE9|Q9LDE9_ORYSJ Putative uncharacterized protein P0483F08.41
           (Putative uncharacterized protein) (Os01g0221600
           protein) (Putative uncharacterized protein P0443E05.4)
           OS=Oryza sativa subsp. japonica GN=P0483F08.41 PE=4 SV=1
          Length = 524

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +2

Query: 5   RVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFK 136
           R+R LES +ALS+ TF +LL+E   RLD++VEA E L  +A FK
Sbjct: 476 RMRALESTTALSLATFTSLLIEFVARLDHLVEAAERLATMARFK 519


>tr|A2WM69|A2WM69_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00940 PE=4 SV=1
          Length = 524

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +2

Query: 5   RVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFK 136
           R+R LES +ALS+ TF +LL+E   RLD++VEA E L  +A FK
Sbjct: 476 RMRALESTTALSLATFTSLLIEFVARLDHLVEAAERLATMARFK 519


>tr|Q5Z6M5|Q5Z6M5_ORYSJ Aluminum-activated malate transporter-like
           OS=Oryza sativa subsp. japonica GN=OSJNBa0084K06.5-2
           PE=4 SV=1
          Length = 309

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDP 142
           +  +  ESASALS+ TFA+LL+E   RL  VV A +EL   ANFK+P
Sbjct: 237 EETKTYESASALSLATFASLLIEFVARLQNVVNAFQELSDKANFKEP 283


>tr|B8B0D8|B8B0D8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22476 PE=4 SV=1
          Length = 597

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDP 142
           +  +  ESASALS+ TFA+LL+E   RL  VV A +EL   ANFK+P
Sbjct: 525 EETKTYESASALSLATFASLLIEFVARLQNVVNAFQELSDKANFKEP 571


>tr|A3BAJ0|A3BAJ0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_020062 PE=4 SV=1
          Length = 545

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   QRVRVLESASALSIGTFATLLMEVALRLDYVVEAVEELGKLANFKDP 142
           +  +  ESASALS+ TFA+LL+E   RL  VV A +EL   ANFK+P
Sbjct: 473 EETKTYESASALSLATFASLLIEFVARLQNVVNAFQELSDKANFKEP 519