BP913647
Clone id YMU001_000032_F09
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCCACAATGGCGCCATCAATGGAGAGCGAAGAACCAAGCGCAGCGCCAACGCCCATGG
AAGCTCACACACCAGTCGAAGCACCTACGCCTTACGTAAGCCCAGCTCCAGCCCAGAGCA
CACCTACGCCGGCCCCGGCTCCACAGATGCGCGCACCATCGTCAGTACCCTCTACAACGC
CCTCAGAAACACCAGCGGAATCGCCCATTTTCGACATTCCGCCACCCCCGCCAGAGCGCG
ACACGCTTGCACCTGAGCCAGCAGAGGTGGGCTCCTCCAGCTCTGCCGCCGCTGGATTCT
CAGCATCTCTCTTCATCTGTGCCGCTCTAGCAGCCTTGACGCTTGCCTTCCTCCATTGAT
CCCATCTTCCTTCTCCATTATATTTTACTTCATTCTTTGCTTCCCGCGAATCTGGGTTTC
GAAAAAAAATAAAAAATGCATATTTGTATTTCCCGCGTCCAATGTCCGCCACGACCTTTT
TGAAACCTCGATTCCATTTTTTTTAGCTTATGGAAA
■■Homology search results ■■ -
sp_hit_id Q9XD73
Definition sp|Q9XD73|NRDJ_STRCT Vitamin B12-dependent ribonucleotide reductase (Fragment) OS=Streptomyces cattleya
Align length 26
Score (bit) 33.9
E-value 0.46
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913647|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_F09.
(516 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9XD73|NRDJ_STRCT Vitamin B12-dependent ribonucleotide reduct... 34 0.46
sp|Q028J4|CINAL_SOLUE CinA-like protein OS=Solibacter usitatus (... 32 1.8
sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=... 32 2.3
sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus ... 32 2.3
sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus mo... 32 2.3
sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus ca... 32 2.3
sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus GN... 32 2.3
sp|Q92574|TSC1_HUMAN Hamartin OS=Homo sapiens GN=TSC1 PE=1 SV=2 30 5.1
sp|P01854|IGHE_HUMAN Ig epsilon chain C region OS=Homo sapiens G... 30 5.1
sp|Q924A0|TF7L2_MOUSE Transcription factor 7-like 2 OS=Mus muscu... 30 5.2
sp|Q9NQB0|TF7L2_HUMAN Transcription factor 7-like 2 OS=Homo sapi... 30 5.2
sp|P41738|AHR_RAT Aryl hydrocarbon receptor OS=Rattus norvegicus... 30 5.2
sp|Q7M3M6|E74EF_DROVI Ecdysone-induced protein 74EF OS=Drosophil... 30 6.8
sp|Q9H6K5|YS027_HUMAN Putative uncharacterized protein FLJ22184 ... 30 8.8
sp|Q0CJU8|HSE1_ASPTN Class E vacuolar protein-sorting machinery ... 30 8.8
sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase... 30 8.8
sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli GN=A... 30 8.8

>sp|Q9XD73|NRDJ_STRCT Vitamin B12-dependent ribonucleotide reductase
(Fragment) OS=Streptomyces cattleya GN=nrdJ PE=3 SV=1
Length = 599

Score = 33.9 bits (76), Expect = 0.46
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3

Query: 3 ATMAPSMESEEPSAAPTPMEAHTPVE 80
AT AP+ +++EP+AAP+P +AH E
Sbjct: 533 ATTAPAAKAQEPAAAPSPKQAHNSTE 558


>sp|Q028J4|CINAL_SOLUE CinA-like protein OS=Solibacter usitatus
(strain Ellin6076) GN=Acid_1567 PE=3 SV=1
Length = 416

Score = 32.0 bits (71), Expect = 1.8
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2

Query: 8 NGAINGERRTKRSANAHGSSHTSRSTYALRKPSSSPEHTYAGPGSTDARTIVSTLYNALR 187
+GA++ E A A G+ + STYAL + AGP S D R V T+Y A+
Sbjct: 324 HGAVSKETA---EAMAIGARRRTSSTYALSITGA------AGPDSADERVPVGTMYTAIA 374

Query: 188 NTSG 199
+ +G
Sbjct: 375 DAAG 378


>sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=Ahr
PE=2 SV=1
Length = 854

Score = 31.6 bits (70), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1

Query: 190 HQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSS 315
++ + PFS P T+ + S++ WAP + P DS H SS
Sbjct: 412 YEISSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDSFHPSS 453


>sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus
GN=Ahr PE=2 SV=1
Length = 854

Score = 31.6 bits (70), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1

Query: 190 HQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSS 315
++ + PFS P T+ + S++ WAP + P DS H SS
Sbjct: 412 YEISSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDSFHPSS 453


>sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus
molossinus GN=Ahr PE=2 SV=1
Length = 883

Score = 31.6 bits (70), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1

Query: 190 HQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSS 315
++ + PFS P T+ + S++ WAP + P DS H SS
Sbjct: 408 YEISSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDSFHPSS 449


>sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus
castaneus GN=Ahr PE=2 SV=1
Length = 848

Score = 31.6 bits (70), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1

Query: 190 HQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSS 315
++ + PFS P T+ + S++ WAP + P DS H SS
Sbjct: 408 YEISSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDSFHPSS 449


>sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus
GN=Ahr PE=1 SV=3
Length = 848

Score = 31.6 bits (70), Expect = 2.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1

Query: 190 HQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSS 315
++ + PFS P T+ + S++ WAP + P DS H SS
Sbjct: 408 YEISSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDSFHPSS 449


>sp|Q92574|TSC1_HUMAN Hamartin OS=Homo sapiens GN=TSC1 PE=1 SV=2
Length = 1164

Score = 30.4 bits (67), Expect = 5.1
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Frame = +2

Query: 2 GHN---GAINGERRTKRSANAHGSS------HTSRSTYALRKPSSSPEHTYAGPGSTDAR 154
GHN NGE +T R ++A GSS +S S+ L P P H AGP S+
Sbjct: 1006 GHNEEASGHNGETKTPRPSSARGSSGSRGGGGSSSSSSELSTP-EKPPHQRAGPFSSRWE 1064

Query: 155 TIVSTLYNALRNTSG 199
T + ++ T G
Sbjct: 1065 TTMGEASASIPTTVG 1079


>sp|P01854|IGHE_HUMAN Ig epsilon chain C region OS=Homo sapiens
GN=IGHE PE=1 SV=1
Length = 428

Score = 30.4 bits (67), Expect = 5.1
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +2

Query: 17 INGERRTKRSANAHGSSHTSRSTYALRKPSSSPE----HTYAGPGSTDARTIVSTLYNAL 184
I GE R + H RST P ++PE T PGS D RT+ + N +
Sbjct: 292 IEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFM 351

Query: 185 RNTSGIAHFRHSATPARARHACT 253
+ + ARH+ T
Sbjct: 352 PEDISVQWLHNEVQLPDARHSTT 374


>sp|Q924A0|TF7L2_MOUSE Transcription factor 7-like 2 OS=Mus musculus
GN=Tcf7l2 PE=1 SV=2
Length = 459

Score = 30.4 bits (67), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1

Query: 181 PQKHQRNRPFST--FRHPRQSATRLHLSQQRWAPPALPPLDSQH 306
PQ+ Q P +T FRHP +A ++ S R+ P +PP + H
Sbjct: 239 PQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLH 282


tr_hit_id B6HIS9
Definition tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium chrysogenum Wisconsin 54-1255
Align length 73
Score (bit) 40.4
E-value 0.052
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913647|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_F09.
(516 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium chrysog... 40 0.052
tr|Q4N2V1|Q4N2V1_THEPA Putative uncharacterized protein OS=Theil... 38 0.26
tr|B2H3Q1|B2H3Q1_BURPS Putative uncharacterized protein OS=Burkh... 37 0.44
tr|Q10X28|Q10X28_TRIEI Hemolysin-type calcium-binding region OS=... 36 0.98
tr|A5J8H8|A5J8H8_BURMA Putative uncharacterized protein (Fragmen... 36 1.3
tr|B4MAG7|B4MAG7_DROVI GJ15668 OS=Drosophila virilis GN=GJ15668 ... 36 1.3
tr|B8LEG8|B8LEG8_THAPS Predicted protein (Fragment) OS=Thalassio... 35 1.7
tr|B4KCQ9|B4KCQ9_DROMO GI10238 OS=Drosophila mojavensis GN=GI102... 35 2.9
tr|Q3LHL4|Q3LHL4_SOLTU Pre-mRNA splicing factor OS=Solanum tuber... 35 2.9
tr|B1U0G4|B1U0G4_MICLU Putative uncharacterized protein OS=Micro... 34 3.7
tr|Q2U9Z4|Q2U9Z4_ASPOR Mitochondrial ribosomal protein MRP7 OS=A... 34 4.9
tr|B8NQJ9|B8NQJ9_ASPFL 50S ribosomal protein L27, putative OS=As... 34 4.9
tr|B0WDJ4|B0WDJ4_CULQU Putative uncharacterized protein OS=Culex... 34 5.0
tr|A5EP95|A5EP95_BRASB Putative uncharacterized protein OS=Brady... 33 6.4
tr|Q178Q5|Q178Q5_AEDAE Chromatin regulatory protein sir2 OS=Aede... 33 6.4
tr|B6K9Z9|B6K9Z9_TOXGO Putative uncharacterized protein OS=Toxop... 33 6.4
tr|B4J405|B4J405_DROGR GH21524 OS=Drosophila grimshawi GN=GH2152... 33 6.4
tr|Q0CE75|Q0CE75_ASPTN Putative uncharacterized protein OS=Asper... 33 6.4
tr|A2QUM4|A2QUM4_ASPNC Remark: L2 of S. cerevisiae is also calle... 33 6.4
tr|B6Q4C1|B6Q4C1_PENMA SH3 domain protein OS=Penicillium marneff... 33 6.5
tr|B6SKE0|B6SKE0_MAIZE Heat shock protein binding protein OS=Zea... 28 7.0
tr|B4FDR7|B4FDR7_MAIZE Putative uncharacterized protein OS=Zea m... 27 7.1
tr|A9BRQ3|A9BRQ3_DELAS Phage SPO1 DNA polymerase-related protein... 33 8.3
tr|B6KKT3|B6KKT3_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.3
tr|B4M6G2|B4M6G2_DROVI GJ10397 OS=Drosophila virilis GN=GJ10397 ... 33 8.3
tr|B4JU57|B4JU57_DROGR GH16553 OS=Drosophila grimshawi GN=GH1655... 33 8.3

>tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc21g01500 PE=3 SV=1
Length = 265

Score = 40.4 bits (93), Expect = 0.052
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2

Query: 26 ERRTKRSANAHGSSHTSRSTYALRKPSSSPEHTY-AGPGSTDARTIVSTLYNALRNTSGI 202
E R RS+ GS HT RS+ +L +P S EH+ P S++++ T + L N + +
Sbjct: 71 EIRHLRSSQPQGSYHTPRSSSSLGRPPSQTEHSSPQRPTSSESQPQPQTYQSRLTNLASL 130

Query: 203 AHFRH-SATPARA 238
+R SATPA A
Sbjct: 131 LPYRRGSATPASA 143


>tr|Q4N2V1|Q4N2V1_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP04_0241 PE=4 SV=1
Length = 1429

Score = 38.1 bits (87), Expect = 0.26
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2

Query: 35 TKRSANAHGSSHTSRSTYALRKPSSSPEHTYAGPGSTDARTIVSTLYNALRNTSGIAHFR 214
T ++ H SSH+S+S+Y+ +S P HT GP + A TI ++ + GI+H
Sbjct: 111 TSTHSSTHSSSHSSQSSYS----NSQPGHT-NGPTTHSAHTISHPSHSISHSAHGISHSS 165

Query: 215 HS 220
HS
Sbjct: 166 HS 167


>tr|B2H3Q1|B2H3Q1_BURPS Putative uncharacterized protein
OS=Burkholderia pseudomallei 1655 GN=BURPS1655_K0408
PE=4 SV=1
Length = 479

Score = 37.4 bits (85), Expect = 0.44
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 8/39 (20%)
Frame = -2

Query: 134 GRRRCAL-GWSWAYVRRRCFDW-CVSFHG------RWRC 42
GRRR G+ W Y RRRCF+W C + G RWRC
Sbjct: 172 GRRRFQWRGFGWRYFRRRCFEWRCFRWRGFRRRRFRWRC 210


>tr|Q10X28|Q10X28_TRIEI Hemolysin-type calcium-binding region
OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4192
PE=4 SV=1
Length = 1287

Score = 36.2 bits (82), Expect = 0.98
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3

Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92
T AP+ E+ P+ APTP EA TP EAPTP
Sbjct: 633 TEAPTPTEAPTPTEAPTPTEAPTPTEAPTP 662



Score = 34.7 bits (78), Expect = 2.9
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3

Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92
T AP+ E+ P+ APTP EA TP E PTP
Sbjct: 639 TEAPTPTEAPTPTEAPTPTEAPTPTETPTP 668



Score = 34.7 bits (78), Expect = 2.9
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3

Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92
T AP+ E+ P+ APTP E TP EAPTP
Sbjct: 645 TEAPTPTEAPTPTEAPTPTETPTPTEAPTP 674



Score = 33.9 bits (76), Expect = 4.9
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3

Query: 36 PSAAPTPMEAHTPVEAPTP 92
P+ APTP EA TP EAPTP
Sbjct: 632 PTEAPTPTEAPTPTEAPTP 650


>tr|A5J8H8|A5J8H8_BURMA Putative uncharacterized protein (Fragment)
OS=Burkholderia mallei FMH GN=BMAFMH_0485 PE=4 SV=1
Length = 583

Score = 35.8 bits (81), Expect = 1.3
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2

Query: 134 GRRRCAL-GWSWAYVRRRCFDW-CVSFHGRWRC 42
GRRR G+ W Y RRRCF+W C RWRC
Sbjct: 450 GRRRFQWRGFGWRYFRRRCFEWRCF----RWRC 478


>tr|B4MAG7|B4MAG7_DROVI GJ15668 OS=Drosophila virilis GN=GJ15668
PE=4 SV=1
Length = 642

Score = 35.8 bits (81), Expect = 1.3
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1

Query: 1 RPQWRHQWRAKNQAQRQRPWKLTHQSKHLRLT*AQLQXXXXXXXXXXXXXXXXXQYPLQR 180
RPQ R Q + Q Q+QRP +L + +H++ Q Q Q QR
Sbjct: 174 RPQQRQQLPQRPQLQQQRPQQLQQRPQHMQQWPQQHQ--------QRPQQQQRPQQRQQR 225

Query: 181 PQKHQR--NRPFSTFRHPRQSATRLHLSQQR 267
PQ HQ+ RP + P+ R L QQR
Sbjct: 226 PQLHQQRPQRPQQQQQRPQFHQQRPQLQQQR 256


>tr|B8LEG8|B8LEG8_THAPS Predicted protein (Fragment)
OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_bd843
PE=4 SV=1
Length = 497

Score = 35.4 bits (80), Expect = 1.7
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2

Query: 5 HNGAINGERRTKRSANAH--GSSHTSRSTYALRK----PSSSPEHTYAGPGSTDARTIVS 166
++G I G R + N H GSS SRS+ A P+SS +HT + R S
Sbjct: 247 NSGGIGGGVRGRSLHNRHQYGSSGRSRSSAASSSSRHTPTSSRQHTTPASSARKRRAYGS 306

Query: 167 TLYNALRNTSGIAHFRHSATPARAR 241
+ L NTSG +ATP +R
Sbjct: 307 SGDYGLVNTSGRRKLHSNATPGSSR 331


>tr|B4KCQ9|B4KCQ9_DROMO GI10238 OS=Drosophila mojavensis GN=GI10238
PE=4 SV=1
Length = 677

Score = 34.7 bits (78), Expect = 2.9
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +2

Query: 32 RTKRSANAHGSSHTSRS-TYALRKPSSSPEHT--YAGP-----GSTDARTIVSTLYNALR 187
RT RS + GS H+ RS + A R+ S H+ A P GS D++ S ++ R
Sbjct: 53 RTSRSRSGSGSPHSPRSGSAASRRSRSGSAHSPRSASPRSQHSGSPDSKRSHSRSHS--R 110

Query: 188 NTSGIAHFRHSATPARAR 241
+ SG H +HS TP R
Sbjct: 111 SRSGTPHSKHSGTPHSKR 128


>tr|Q3LHL4|Q3LHL4_SOLTU Pre-mRNA splicing factor OS=Solanum
tuberosum GN=PPS2 PE=2 SV=1
Length = 672

Score = 34.7 bits (78), Expect = 2.9
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1

Query: 163 QYPLQRPQKHQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSSS 318
Q+P RP + + P + H LHL QQ+ PPA PP HL SS
Sbjct: 57 QFPYPRPMQQPQLHPHTPPPH------LLHLQQQQQPPPAFPPHMPPHLVSS 102


>tr|B1U0G4|B1U0G4_MICLU Putative uncharacterized protein
OS=Micrococcus luteus NCTC 2665 GN=MlutDRAFT_2113 PE=3
SV=1
Length = 282

Score = 34.3 bits (77), Expect = 3.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3

Query: 12 APSMESEEPSAAPTPMEAHTPVEAPTP 92
A +E++EP+ APTP E TP E P P
Sbjct: 80 AVPIETQEPAGAPTPSEEPTPTEEPAP 106