BP913647 |
Clone id |
YMU001_000032_F09 |
Library |
YMU01 |
Length |
516 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_F09. |
Accession |
BP913647 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGGCCACAATGGCGCCATCAATGGAGAGCGAAGAACCAAGCGCAGCGCCAACGCCCATGG AAGCTCACACACCAGTCGAAGCACCTACGCCTTACGTAAGCCCAGCTCCAGCCCAGAGCA CACCTACGCCGGCCCCGGCTCCACAGATGCGCGCACCATCGTCAGTACCCTCTACAACGC CCTCAGAAACACCAGCGGAATCGCCCATTTTCGACATTCCGCCACCCCCGCCAGAGCGCG ACACGCTTGCACCTGAGCCAGCAGAGGTGGGCTCCTCCAGCTCTGCCGCCGCTGGATTCT CAGCATCTCTCTTCATCTGTGCCGCTCTAGCAGCCTTGACGCTTGCCTTCCTCCATTGAT CCCATCTTCCTTCTCCATTATATTTTACTTCATTCTTTGCTTCCCGCGAATCTGGGTTTC GAAAAAAAATAAAAAATGCATATTTGTATTTCCCGCGTCCAATGTCCGCCACGACCTTTT TGAAACCTCGATTCCATTTTTTTTAGCTTATGGAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XD73 |
Definition |
sp|Q9XD73|NRDJ_STRCT Vitamin B12-dependent ribonucleotide reductase (Fragment) OS=Streptomyces cattleya |
Align length |
26 |
Score (bit) |
33.9 |
E-value |
0.46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6HIS9 |
Definition |
tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium chrysogenum Wisconsin 54-1255 |
Align length |
73 |
Score (bit) |
40.4 |
E-value |
0.052 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913647|Adiantum capillus-veneris mRNA, clone: YMU001_000032_F09. (516 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium chrysog... 40 0.052 tr|Q4N2V1|Q4N2V1_THEPA Putative uncharacterized protein OS=Theil... 38 0.26 tr|B2H3Q1|B2H3Q1_BURPS Putative uncharacterized protein OS=Burkh... 37 0.44 tr|Q10X28|Q10X28_TRIEI Hemolysin-type calcium-binding region OS=... 36 0.98 tr|A5J8H8|A5J8H8_BURMA Putative uncharacterized protein (Fragmen... 36 1.3 tr|B4MAG7|B4MAG7_DROVI GJ15668 OS=Drosophila virilis GN=GJ15668 ... 36 1.3 tr|B8LEG8|B8LEG8_THAPS Predicted protein (Fragment) OS=Thalassio... 35 1.7 tr|B4KCQ9|B4KCQ9_DROMO GI10238 OS=Drosophila mojavensis GN=GI102... 35 2.9 tr|Q3LHL4|Q3LHL4_SOLTU Pre-mRNA splicing factor OS=Solanum tuber... 35 2.9 tr|B1U0G4|B1U0G4_MICLU Putative uncharacterized protein OS=Micro... 34 3.7 tr|Q2U9Z4|Q2U9Z4_ASPOR Mitochondrial ribosomal protein MRP7 OS=A... 34 4.9 tr|B8NQJ9|B8NQJ9_ASPFL 50S ribosomal protein L27, putative OS=As... 34 4.9 tr|B0WDJ4|B0WDJ4_CULQU Putative uncharacterized protein OS=Culex... 34 5.0 tr|A5EP95|A5EP95_BRASB Putative uncharacterized protein OS=Brady... 33 6.4 tr|Q178Q5|Q178Q5_AEDAE Chromatin regulatory protein sir2 OS=Aede... 33 6.4 tr|B6K9Z9|B6K9Z9_TOXGO Putative uncharacterized protein OS=Toxop... 33 6.4 tr|B4J405|B4J405_DROGR GH21524 OS=Drosophila grimshawi GN=GH2152... 33 6.4 tr|Q0CE75|Q0CE75_ASPTN Putative uncharacterized protein OS=Asper... 33 6.4 tr|A2QUM4|A2QUM4_ASPNC Remark: L2 of S. cerevisiae is also calle... 33 6.4 tr|B6Q4C1|B6Q4C1_PENMA SH3 domain protein OS=Penicillium marneff... 33 6.5 tr|B6SKE0|B6SKE0_MAIZE Heat shock protein binding protein OS=Zea... 28 7.0 tr|B4FDR7|B4FDR7_MAIZE Putative uncharacterized protein OS=Zea m... 27 7.1 tr|A9BRQ3|A9BRQ3_DELAS Phage SPO1 DNA polymerase-related protein... 33 8.3 tr|B6KKT3|B6KKT3_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.3 tr|B4M6G2|B4M6G2_DROVI GJ10397 OS=Drosophila virilis GN=GJ10397 ... 33 8.3 tr|B4JU57|B4JU57_DROGR GH16553 OS=Drosophila grimshawi GN=GH1655... 33 8.3
>tr|B6HIS9|B6HIS9_PENCH Pc21g01500 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc21g01500 PE=3 SV=1 Length = 265
Score = 40.4 bits (93), Expect = 0.052 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = +2
Query: 26 ERRTKRSANAHGSSHTSRSTYALRKPSSSPEHTY-AGPGSTDARTIVSTLYNALRNTSGI 202 E R RS+ GS HT RS+ +L +P S EH+ P S++++ T + L N + + Sbjct: 71 EIRHLRSSQPQGSYHTPRSSSSLGRPPSQTEHSSPQRPTSSESQPQPQTYQSRLTNLASL 130
Query: 203 AHFRH-SATPARA 238 +R SATPA A Sbjct: 131 LPYRRGSATPASA 143
>tr|Q4N2V1|Q4N2V1_THEPA Putative uncharacterized protein OS=Theileria parva GN=TP04_0241 PE=4 SV=1 Length = 1429
Score = 38.1 bits (87), Expect = 0.26 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = +2
Query: 35 TKRSANAHGSSHTSRSTYALRKPSSSPEHTYAGPGSTDARTIVSTLYNALRNTSGIAHFR 214 T ++ H SSH+S+S+Y+ +S P HT GP + A TI ++ + GI+H Sbjct: 111 TSTHSSTHSSSHSSQSSYS----NSQPGHT-NGPTTHSAHTISHPSHSISHSAHGISHSS 165
Query: 215 HS 220 HS Sbjct: 166 HS 167
>tr|B2H3Q1|B2H3Q1_BURPS Putative uncharacterized protein OS=Burkholderia pseudomallei 1655 GN=BURPS1655_K0408 PE=4 SV=1 Length = 479
Score = 37.4 bits (85), Expect = 0.44 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 8/39 (20%) Frame = -2
Query: 134 GRRRCAL-GWSWAYVRRRCFDW-CVSFHG------RWRC 42 GRRR G+ W Y RRRCF+W C + G RWRC Sbjct: 172 GRRRFQWRGFGWRYFRRRCFEWRCFRWRGFRRRRFRWRC 210
>tr|Q10X28|Q10X28_TRIEI Hemolysin-type calcium-binding region OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4192 PE=4 SV=1 Length = 1287
Score = 36.2 bits (82), Expect = 0.98 Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +3
Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92 T AP+ E+ P+ APTP EA TP EAPTP Sbjct: 633 TEAPTPTEAPTPTEAPTPTEAPTPTEAPTP 662
Score = 34.7 bits (78), Expect = 2.9 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +3
Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92 T AP+ E+ P+ APTP EA TP E PTP Sbjct: 639 TEAPTPTEAPTPTEAPTPTEAPTPTETPTP 668
Score = 34.7 bits (78), Expect = 2.9 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +3
Query: 6 TMAPS-MESEEPSAAPTPMEAHTPVEAPTP 92 T AP+ E+ P+ APTP E TP EAPTP Sbjct: 645 TEAPTPTEAPTPTEAPTPTETPTPTEAPTP 674
Score = 33.9 bits (76), Expect = 4.9 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +3
Query: 36 PSAAPTPMEAHTPVEAPTP 92 P+ APTP EA TP EAPTP Sbjct: 632 PTEAPTPTEAPTPTEAPTP 650
>tr|A5J8H8|A5J8H8_BURMA Putative uncharacterized protein (Fragment) OS=Burkholderia mallei FMH GN=BMAFMH_0485 PE=4 SV=1 Length = 583
Score = 35.8 bits (81), Expect = 1.3 Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2
Query: 134 GRRRCAL-GWSWAYVRRRCFDW-CVSFHGRWRC 42 GRRR G+ W Y RRRCF+W C RWRC Sbjct: 450 GRRRFQWRGFGWRYFRRRCFEWRCF----RWRC 478
>tr|B4MAG7|B4MAG7_DROVI GJ15668 OS=Drosophila virilis GN=GJ15668 PE=4 SV=1 Length = 642
Score = 35.8 bits (81), Expect = 1.3 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 2/91 (2%) Frame = +1
Query: 1 RPQWRHQWRAKNQAQRQRPWKLTHQSKHLRLT*AQLQXXXXXXXXXXXXXXXXXQYPLQR 180 RPQ R Q + Q Q+QRP +L + +H++ Q Q Q QR Sbjct: 174 RPQQRQQLPQRPQLQQQRPQQLQQRPQHMQQWPQQHQ--------QRPQQQQRPQQRQQR 225
Query: 181 PQKHQR--NRPFSTFRHPRQSATRLHLSQQR 267 PQ HQ+ RP + P+ R L QQR Sbjct: 226 PQLHQQRPQRPQQQQQRPQFHQQRPQLQQQR 256
>tr|B8LEG8|B8LEG8_THAPS Predicted protein (Fragment) OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_bd843 PE=4 SV=1 Length = 497
Score = 35.4 bits (80), Expect = 1.7 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Frame = +2
Query: 5 HNGAINGERRTKRSANAH--GSSHTSRSTYALRK----PSSSPEHTYAGPGSTDARTIVS 166 ++G I G R + N H GSS SRS+ A P+SS +HT + R S Sbjct: 247 NSGGIGGGVRGRSLHNRHQYGSSGRSRSSAASSSSRHTPTSSRQHTTPASSARKRRAYGS 306
Query: 167 TLYNALRNTSGIAHFRHSATPARAR 241 + L NTSG +ATP +R Sbjct: 307 SGDYGLVNTSGRRKLHSNATPGSSR 331
>tr|B4KCQ9|B4KCQ9_DROMO GI10238 OS=Drosophila mojavensis GN=GI10238 PE=4 SV=1 Length = 677
Score = 34.7 bits (78), Expect = 2.9 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%) Frame = +2
Query: 32 RTKRSANAHGSSHTSRS-TYALRKPSSSPEHT--YAGP-----GSTDARTIVSTLYNALR 187 RT RS + GS H+ RS + A R+ S H+ A P GS D++ S ++ R Sbjct: 53 RTSRSRSGSGSPHSPRSGSAASRRSRSGSAHSPRSASPRSQHSGSPDSKRSHSRSHS--R 110
Query: 188 NTSGIAHFRHSATPARAR 241 + SG H +HS TP R Sbjct: 111 SRSGTPHSKHSGTPHSKR 128
>tr|Q3LHL4|Q3LHL4_SOLTU Pre-mRNA splicing factor OS=Solanum tuberosum GN=PPS2 PE=2 SV=1 Length = 672
Score = 34.7 bits (78), Expect = 2.9 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = +1
Query: 163 QYPLQRPQKHQRNRPFSTFRHPRQSATRLHLSQQRWAPPALPPLDSQHLSSS 318 Q+P RP + + P + H LHL QQ+ PPA PP HL SS Sbjct: 57 QFPYPRPMQQPQLHPHTPPPH------LLHLQQQQQPPPAFPPHMPPHLVSS 102
>tr|B1U0G4|B1U0G4_MICLU Putative uncharacterized protein OS=Micrococcus luteus NCTC 2665 GN=MlutDRAFT_2113 PE=3 SV=1 Length = 282
Score = 34.3 bits (77), Expect = 3.7 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3
Query: 12 APSMESEEPSAAPTPMEAHTPVEAPTP 92 A +E++EP+ APTP E TP E P P Sbjct: 80 AVPIETQEPAGAPTPSEEPTPTEEPAP 106
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