BP913643
Clone id YMU001_000032_F02
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCACAGCGACATATATGAAAAAGGTTGCATTTGCAAGGGAATAATTCAATTTGTTAGC
ACAAACCCCCCCTGCAGACTTATTGCAATTTCAAAGCGAACCATACAACCACTTGTCACT
TCCAATGACTTTCAGTCCAAGCTGCAGCAATAAAAATCCATTCTTTTAACCACTGAGTAC
ACTTATTTCCTTTGATTCAGCAGCCCTTAAACCACAAAAGTGGTTTACCCTGTTTGTTTG
AAAAGCCACTGAATCCGCTTATCCTGAGAACCCTATTCACAAATTTTGCTAAATGAGCTA
ATGCTCACAACACAGGAGATGTATATTGCTCAGTCCAACATATTAAAGAAGAACGCCAAA
ACCACCCACGCACCATAATCACTAGATGTACCCCACATTAAAATGACCATCTCTTGAGTA
CCTGCAGGTAATATCTC
■■Homology search results ■■ -
sp_hit_id Q8NDM7
Definition sp|Q8NDM7|CJ079_HUMAN WD repeat-containing protein C10orf79 OS=Homo sapiens
Align length 26
Score (bit) 30.8
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913643|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_F02.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NDM7|CJ079_HUMAN WD repeat-containing protein C10orf79 OS=H... 31 2.6
sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom... 29 7.5
sp|Q73FR5|MNMA_WOLPM tRNA-specific 2-thiouridylase mnmA OS=Wolba... 29 9.8

>sp|Q8NDM7|CJ079_HUMAN WD repeat-containing protein C10orf79 OS=Homo
sapiens GN=C10orf79 PE=2 SV=2
Length = 1666

Score = 30.8 bits (68), Expect = 2.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1

Query: 40 GIIQFVSTNPPCRLIAISKRTIQPLV 117
GI+ ++TN PC ++A S R ++PL+
Sbjct: 66 GIVGVMATNIPCEVVAFSDRKLKPLI 91


>sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Homo
sapiens GN=WNK4 PE=1 SV=1
Length = 1243

Score = 29.3 bits (64), Expect = 7.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +2

Query: 122 PMTFSPSCSN---KNPFF*PLSTLISFDSAALKP 214
P TFSP+CS +PFF P + SF S P
Sbjct: 889 PPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAP 922


>sp|Q73FR5|MNMA_WOLPM tRNA-specific 2-thiouridylase mnmA
OS=Wolbachia pipientis wMel GN=mnmA PE=3 SV=1
Length = 370

Score = 28.9 bits (63), Expect = 9.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3

Query: 153 LLLQLGLKVIGSDKWLYGSL*NCNKSAGGVCANK 52
LL LG KV+G LYG+ N N G CA +
Sbjct: 37 LLHNLGYKVVGVTLQLYGTDGNANARKGACCAGQ 70


tr_hit_id Q0GK55
Definition tr|Q0GK55|Q0GK55_9CLOS Polyprotein 1a OS=Strawberry chlorotic fleck associated virus
Align length 45
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913643|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_F02.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0GK55|Q0GK55_9CLOS Polyprotein 1a OS=Strawberry chlorotic fl... 33 9.2

>tr|Q0GK55|Q0GK55_9CLOS Polyprotein 1a OS=Strawberry chlorotic fleck
associated virus PE=4 SV=1
Length = 2787

Score = 32.7 bits (73), Expect = 9.2
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -2

Query: 346 LICWTEQYTSPVL*ALAHLAKFVNRVLRISGFSGFSNKQGKPLLW 212
++ W QY + L+ L + +N ++++ G + K+G +LW
Sbjct: 1239 IVSWASQYLGSNMVGLSKLRELINTIIKVCGEAHLKTKEGFSMLW 1283