BP913606
Clone id YMU001_000032_B05
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTGGTTGCCATTAGTGGATAGGATTGTCTATTTTGGGCCCTACGGTACTCTGTAGTGAA
GTGGTGTGCTTGATTTAGTGTTGTATTGGACTTGTGGAATTTCTTCTTTACTCTTGGAGG
CCCCTAGATGATGCCAGATCCTTGGCCTTGTCATGTATCCAAGATCTGAGAGGAGGTGTT
AGTATTCAAAGCACTATGCAAACATCGATTGGTGGACAACGGAAAAGATCCATTATTTTG
TCCAAGGGTGCTAGCATAGATCTAACGAAAGCGGAGGCTACTGGCAATTGGCCTAAATTG
CAGTACGCGCATGATGTAAGAAGGTTTTTGGGCATGTGCTCTTACTACAAGAGGTTCATC
AGACAATTTGTGGGAATTGCTTCGCCGTTTGCATACCCCTGACTCAAAAAGGGGTACCAT
TCACTTGGGGGCCTCCACAGATTGCAGTATTTGAGCTGTTCAAGTAGAAGTTGACTACTC
GACAAGTGTTGATTCTACGAGACTTGTAGAAACCTTTTAAGGTTTACTGTGATGCTTGTG
GAAATA
■■Homology search results ■■ -
sp_hit_id P10401
Definition sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster
Align length 105
Score (bit) 48.1
E-value 3.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913606|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B05.
(546 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 48 3e-05
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0... 46 1e-04
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 40 3e-04
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 40 3e-04
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus... 40 3e-04
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi... 40 4e-04
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi... 40 4e-04
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 42 0.003
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 38 0.003
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 37 0.003
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 33 0.006
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi... 40 0.007
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 33 0.033
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 37 0.063
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 35 0.31
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 34 0.53
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 33 1.2
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 33 1.2
sp|Q43931|CATB_ACIAD Muconate cycloisomerase 1 OS=Acinetobacter ... 31 4.4
sp|Q73U92|DNAE2_MYCPA Error-prone DNA polymerase OS=Mycobacteriu... 30 7.7

>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1035

Score = 48.1 bits (113), Expect = 3e-05
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1

Query: 79 CCIGLVEFLLYSWRPLDDARSL--ALSCIQDLRGGVSIQSTMQTSIGGQRKRSIILSKGA 252
C + + + +++S D R + L C+ D VS + T + I+ G
Sbjct: 336 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 395

Query: 253 SIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
D K +A +P+ + VR FLG+ SYY+ FI+ F IA P
Sbjct: 396 KSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARP 440


>sp|P92523|M860_ARATH Uncharacterized mitochondrial protein
AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1
Length = 158

Score = 46.2 bits (108), Expect = 1e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1

Query: 226 RSIILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
R II +G S D K EA WP+ + ++R FLG+ YY+RF++ + I P
Sbjct: 36 RHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRP 89


>sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia
virus GN=pol PE=3 SV=1
Length = 1196

Score = 39.7 bits (91), Expect(2) = 3e-04
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT+ G F WGP Q + K L T L L DL KPF+++ D
Sbjct: 446 PLTKTGTLFNWGPDQQKAYHEIKQALLTAPALGLPDLTKPFELFVD 491



Score = 24.6 bits (52), Expect(2) = 3e-04
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1

Query: 268 KAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASPFAYP*LKKG 414
+ E P + +R FLG + + +I +F +A+P YP K G
Sbjct: 404 RKETVMGQPTPKTPRQLREFLGTAGFCRLWIPRFAEMAAPL-YPLTKTG 451


>sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia
virus GN=pol PE=1 SV=2
Length = 1199

Score = 40.4 bits (93), Expect(2) = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT+ G F WGP Q ++ K L T L L DL KPF+++ D
Sbjct: 446 PLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 491



Score = 23.5 bits (49), Expect(2) = 3e-04
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1

Query: 268 KAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASPFAYP*LKKG 414
+ E P + +R FLG + + +I F +A+P YP K G
Sbjct: 404 RKETVMGQPTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPL-YPLTKTG 451


>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus
GN=pol PE=3 SV=2
Length = 1196

Score = 40.4 bits (93), Expect(2) = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT+ G F WGP Q ++ K L T L L DL KPF+++ D
Sbjct: 446 PLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 491



Score = 23.5 bits (49), Expect(2) = 3e-04
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1

Query: 268 KAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASPFAYP*LKKG 414
+ E P + +R FLG + + +I F +A+P YP K G
Sbjct: 404 RKETVMGQPTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPL-YPLTKTG 451


>sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia virus
(isolate PVC-211) GN=pol PE=3 SV=1
Length = 1204

Score = 40.0 bits (92), Expect(2) = 4e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT+ G F WGP Q ++ K L T L L DL KPF+++ D
Sbjct: 451 PLTKTGTLFKWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 496



Score = 23.5 bits (49), Expect(2) = 4e-04
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1

Query: 268 KAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASPFAYP*LKKG 414
+ E P + +R FLG + + +I F +A+P YP K G
Sbjct: 409 RKETVMGQPTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPL-YPLTKTG 456


>sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia virus
(isolate FB29) GN=pol PE=3 SV=1
Length = 1204

Score = 40.0 bits (92), Expect(2) = 4e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT+ G F WGP Q ++ K L T L L DL KPF+++ D
Sbjct: 451 PLTKTGTLFEWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 496



Score = 23.5 bits (49), Expect(2) = 4e-04
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1

Query: 268 KAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASPFAYP*LKKG 414
+ E P + +R FLG + + +I F +A+P YP K G
Sbjct: 409 RKETVMGQPTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPL-YPLTKTG 456


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003

Score = 41.6 bits (96), Expect = 0.003
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
I+ + G D K A P +++RFLGM SYY++FI+ + +A P
Sbjct: 330 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKP 381


>sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus
GN=pro-pol PE=3 SV=1
Length = 1127

Score = 37.7 bits (86), Expect(2) = 0.003
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT++ VPFTW F K L + L L DL KPF +Y D
Sbjct: 405 PLTREKVPFTWTEAHQEAFGRIKEALLSAPALALPDLTKPFALYVD 450



Score = 23.1 bits (48), Expect(2) = 0.003
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1

Query: 316 VRRFLGMCSYYKRFIRQFVGIASPFAYP 399
VR FLG + + +I F +A+P YP
Sbjct: 379 VREFLGTAGFCRLWIPGFASLAAPL-YP 405


>sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus
GN=pol PE=3 SV=1
Length = 1165

Score = 37.0 bits (84), Expect(2) = 0.003
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3

Query: 396 PLTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCD 533
PLT++ +PF W F+ K L + L L DL KPF +Y D
Sbjct: 443 PLTKESIPFIWTEEHQQAFDHIKKALLSAPALALPDLTKPFTLYID 488



Score = 23.5 bits (49), Expect(2) = 0.003
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1

Query: 316 VRRFLGMCSYYKRFIRQFVGIASPFAYP*LKK 411
VR FLG + + +I F +A+P YP K+
Sbjct: 417 VREFLGTAGFCRLWIPGFASLAAPL-YPLTKE 447


tr_hit_id Q94I07
Definition tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
Align length 48
Score (bit) 49.7
E-value 6.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913606|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B05.
(546 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=... 50 6e-13
tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy... 50 6e-13
tr|Q7XRT3|Q7XRT3_ORYSJ OSJNBa0042F21.10 protein OS=Oryza sativa ... 50 6e-13
tr|Q53J66|Q53J66_ORYSJ Retrotransposon protein, putative, Ty3-gy... 50 6e-13
tr|Q53JB7|Q53JB7_ORYSJ Retrotransposon gag protein, putative OS=... 50 6e-13
tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa ... 50 6e-13
tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa GN=H02... 50 6e-13
tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa ... 50 6e-13
tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 50 6e-13
tr|Q7XRJ2|Q7XRJ2_ORYSJ OSJNBa0042D13.18 protein OS=Oryza sativa ... 49 1e-12
tr|Q53L74|Q53L74_ORYSJ Retrotransposon protein, putative, Ty3-gy... 50 2e-12
tr|Q53MW9|Q53MW9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 50 2e-12
tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 50 2e-12
tr|Q5MG92|Q5MG92_IPOBA Putative retrotransposon polyprotein OS=I... 51 2e-12
tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 49 1e-11
tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 48 2e-11
tr|Q8L7J3|Q8L7J3_MAIZE Gag-pol polyprotein OS=Zea mays PE=4 SV=1 48 2e-11
tr|Q2QRT1|Q2QRT1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 48 2e-11
tr|A4GMN4|A4GMN4_9POAL Gag-pol polyprotein (Fragment) OS=Panicum... 48 2e-11
tr|Q2QTF6|Q2QTF6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 50 6e-11
tr|A4GKK4|A4GKK4_9POAL Gag-pol polyprotein (Fragment) OS=Panicum... 47 7e-11
tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 47 8e-11
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 47 8e-11
tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ... 49 8e-11
tr|Q9SY43|Q9SY43_ARATH Putative reverse transcriptase OS=Arabido... 53 1e-10
tr|O81490|O81490_ARATH F9D12.11 protein OS=Arabidopsis thaliana ... 52 1e-10
tr|Q9XE68|Q9XE68_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1 50 1e-10
tr|Q33A89|Q33A89_ORYSJ Retrotransposon protein, putative, unclas... 49 2e-10
tr|Q8RUU3|Q8RUU3_ORYSJ Retrotransposon protein, putative, unclas... 49 2e-10
tr|Q6VPE7|Q6VPE7_PETHY Putative reverse transcriptase OS=Petunia... 45 2e-10

>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0034E23.18 PE=4 SV=1
Length = 2447

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 975 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 1022



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 920 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 971



Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
+I +KG ++D A +W + + +R FLG+ YY+RFI F IA P
Sbjct: 1712 VISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARP 1763



Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3

Query: 375 NCFAVCIPLTQ---KGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDA 536
N + P+TQ K F W P F+ K KL + VLIL D K F VYCDA
Sbjct: 1756 NFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDA 1812


>tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g16560 PE=4 SV=1
Length = 2447

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 975 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 1022



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 920 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 971



Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
+I +KG ++D A +W + + +R FLG+ YY+RFI F IA P
Sbjct: 1712 VISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARP 1763



Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3

Query: 375 NCFAVCIPLTQ---KGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDA 536
N + P+TQ K F W P F+ K KL + VLIL D K F VYCDA
Sbjct: 1756 NFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDA 1812


>tr|Q7XRT3|Q7XRT3_ORYSJ OSJNBa0042F21.10 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0042F21.10 PE=4 SV=2
Length = 2388

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 811 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 858



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 756 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 807



Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
+I +KG ++D A +W + + +R FLG+ YY+RFI F IA P
Sbjct: 1687 VISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARP 1738



Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3

Query: 375 NCFAVCIPLTQ---KGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDA 536
N + P+TQ K F W P F+ K KL + VLIL D K F VYCDA
Sbjct: 1731 NFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDA 1787


>tr|Q53J66|Q53J66_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g21960 PE=4 SV=1
Length = 1748

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 1317 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 1364



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 1262 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 1313


>tr|Q53JB7|Q53JB7_ORYSJ Retrotransposon gag protein, putative OS=Oryza
sativa subsp. japonica PE=4 SV=1
Length = 1739

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 1308 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 1355



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 1253 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 1304


>tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0024J22.19 PE=4 SV=2
Length = 1667

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 898 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 945



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 843 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 894


>tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa
GN=H0211A12.9 PE=4 SV=1
Length = 1667

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 898 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 945



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 843 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 894


>tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0022F23.14 PE=4 SV=1
Length = 1431

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 920 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 967



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 865 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 916


>tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
subsp. japonica GN=OSJNBa0095C12.8 PE=4 SV=1
Length = 1234

Score = 49.7 bits (117), Expect(2) = 6e-13
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 791 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASG 838



Score = 47.8 bits (112), Expect(2) = 6e-13
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 736 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 787


>tr|Q7XRJ2|Q7XRJ2_ORYSJ OSJNBa0042D13.18 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0042D13.18 PE=4 SV=2
Length = 2241

Score = 48.9 bits (115), Expect(2) = 1e-12
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDACG 542
LT+KGVPFTWG Q F + K KLT +L L D K F++ CDA G
Sbjct: 1069 LTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDANG 1116



Score = 47.8 bits (112), Expect(2) = 1e-12
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1

Query: 232 IILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
++ +G +D K EA +WP + VR FLG+ +Y+RF++ F IA+P
Sbjct: 1014 VVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 1065



Score = 33.9 bits (76), Expect(2) = 0.046
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1

Query: 235 ILSKGASIDLTKAEATGNWPKLQYAHDVRRFLGMCSYYKRFIRQFVGIASP 387
+ +G D K + P +R FLG +Y+RFI+ F IA P
Sbjct: 2112 VSERGIEFDRAKIDVIDQLPPPVNIKGIRSFLGHADFYRRFIKDFSTIARP 2162



Score = 26.2 bits (56), Expect(2) = 0.046
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3

Query: 399 LTQKGVPFTWGPPQIAVFELFK*KLTTRQVLILRDL*KPFKVYCDA 536
L K PF + + FE+ K L + ++ D PF++ CDA
Sbjct: 2166 LLAKDTPFEFDDACLKSFEILKKALDSGPIIQPPDWTLPFEIMCDA 2211