BP913599 |
Clone id |
YMU001_000032_A09 |
Library |
YMU01 |
Length |
443 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_A09. |
Accession |
BP913599 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGGGAAAACGATACTCAATATTTTGGAAACGACAATTCGGAGCTTTCAACACATACTAT TATAGGCCCCCCTTCCATGACTGAGGCACCAAAGAAACAAAGCACAGCTTACAGGATTGA TGTAAGCTCAATGCCACCAGAGCTAACAATATAGGGAAACCCAGATTCCAAGACTCAGTT AAGAATCATAGATGATGCATGGAATAATCAACATACGGTCCACTATGCATATATACTCCT CTGCAGTAGTTATTAAAATTCACTGCCCTTTGCTGGTCTGCGACACCCACTGCATTCAGA ACCAAAAAGCTCAGAGACTTCTTCGATATTCGTGATTCACTGCCTGCAACACCCTTTCAA CCATCGAACAATGATTGAAACATAAAGAAGGCGCTGGCAACTGTACTTGGTTCTCCCTGC CTGCAAGCCATCTTCCTCCGGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6UY66 |
Definition |
sp|Q6UY66|VGP_MABVO Envelope glycoprotein OS=Lake Victoria marburgvirus (strain Ozolin-75) |
Align length |
48 |
Score (bit) |
31.2 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913599|Adiantum capillus-veneris mRNA, clone: YMU001_000032_A09. (443 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6UY66|VGP_MABVO Envelope glycoprotein OS=Lake Victoria marbu... 31 2.0 sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2 30 3.4 sp|O74504|YJD1_SCHPO UPF0590 protein C594.01 OS=Schizosaccharomy... 30 4.5 sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta O... 29 7.7 sp|Q60564|LMX1B_MESAU LIM homeobox transcription factor 1-beta (... 29 7.7 sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta O... 29 7.7 sp|P09715|IRS1_HCMVA Protein IRS1 OS=Human cytomegalovirus (stra... 29 7.7 sp|Q35054|CYB_MYOPA Cytochrome b OS=Myoprocta pratti GN=MT-CYB P... 29 7.7 sp|P47866|CRFR2_RAT Corticotropin-releasing factor receptor 2 OS... 29 7.7 sp|Q5RB73|MTU1_PONAB Mitochondrial tRNA-specific 2-thiouridylase... 29 10.0 sp|O75648|MTU1_HUMAN Mitochondrial tRNA-specific 2-thiouridylase... 29 10.0 sp|P53413|LMX1B_CHICK LIM/homeobox protein LMX-1.2 OS=Gallus gal... 29 10.0 sp|Q678S2|CYB_OTABY Cytochrome b OS=Otaria byronia GN=MT-CYB PE=... 29 10.0
>sp|Q6UY66|VGP_MABVO Envelope glycoprotein OS=Lake Victoria marburgvirus (strain Ozolin-75) GN=GP PE=3 SV=1 Length = 681
Score = 31.2 bits (69), Expect = 2.0 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2
Query: 8 NDTQYFGNDNSELSTHTIIGPPSMTEAPKKQSTAYRIDVSSMPPELTI 151 N T N+ S+ + T+ PP T P QS A + +S PP+ T+ Sbjct: 337 NTTTISTNNTSKHNLSTLSAPPQNTTNPNTQSMATENEKTSAPPKATL 384
>sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2 Length = 5478
Score = 30.4 bits (67), Expect = 3.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2
Query: 47 STHTIIGPPSMTEAPKKQSTAYRIDVSSMP 136 STHT PPS AP ++ST Y S P Sbjct: 1143 STHTTPSPPSTATAPVEESTTYHRSPGSTP 1172
Score = 30.4 bits (67), Expect = 3.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2
Query: 47 STHTIIGPPSMTEAPKKQSTAYRIDVSSMP 136 STHT PPS AP ++ST Y S P Sbjct: 2226 STHTTPSPPSTATAPVEESTTYHRSPGSTP 2255
Score = 30.4 bits (67), Expect = 3.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2
Query: 47 STHTIIGPPSMTEAPKKQSTAYRIDVSSMP 136 STHT PPS AP ++ST Y S P Sbjct: 2700 STHTTPSPPSTATAPVEESTTYHRSPGSTP 2729
Score = 30.4 bits (67), Expect = 3.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2
Query: 47 STHTIIGPPSMTEAPKKQSTAYRIDVSSMP 136 STHT PPS AP ++ST Y S P Sbjct: 3783 STHTTPSPPSTATAPVEESTTYHRSPGSTP 3812
>sp|O74504|YJD1_SCHPO UPF0590 protein C594.01 OS=Schizosaccharomyces pombe GN=SPCC594.01 PE=1 SV=2 Length = 791
Score = 30.0 bits (66), Expect = 4.5 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +2
Query: 2 RENDTQYFG--NDNSELSTHTIIGPPSMTEAPKKQSTAYRIDVSSMPPELTI*GNPDS 169 +E+DT+ ND+S++S + PS PKK +T + + + P +T+ PDS Sbjct: 161 QESDTESLPEINDSSDVSLSDL---PSTNVTPKKTTTQIDVQTNIVTPPITVTAVPDS 215
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b PE=2 SV=1 Length = 372
Score = 29.3 bits (64), Expect = 7.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3
Query: 402 SCQRLLYVSIIVRWLKGCCRQ*ITNIEEVSELFGSECSGCRRPAKGSEF 256 +CQ+ L S R K C+Q + +LF ++CSGC +EF Sbjct: 62 ACQQALTTSCYFRDRKLYCKQ------DYQQLFAAKCSGCMEKIAPTEF 104
>sp|Q60564|LMX1B_MESAU LIM homeobox transcription factor 1-beta (Fragment) OS=Mesocricetus auratus GN=LMX1B PE=2 SV=1 Length = 369
Score = 29.3 bits (64), Expect = 7.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3
Query: 402 SCQRLLYVSIIVRWLKGCCRQ*ITNIEEVSELFGSECSGCRRPAKGSEF 256 +CQ+ L S R K C+Q + +LF ++CSGC +EF Sbjct: 52 ACQQALTTSCYFRDRKLYCKQ------DYQQLFAAKCSGCMEKIAPTEF 94
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B PE=1 SV=2 Length = 379
Score = 29.3 bits (64), Expect = 7.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -3
Query: 402 SCQRLLYVSIIVRWLKGCCRQ*ITNIEEVSELFGSECSGCRRPAKGSEF 256 +CQ+ L S R K C+Q + +LF ++CSGC +EF Sbjct: 62 ACQQALTTSCYFRDRKLYCKQ------DYQQLFAAKCSGCMEKIAPTEF 104
>sp|P09715|IRS1_HCMVA Protein IRS1 OS=Human cytomegalovirus (strain AD169) GN=IRS1 PE=3 SV=1 Length = 846
Score = 29.3 bits (64), Expect = 7.7 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = +2
Query: 68 PPSMTEAPKKQSTAYRIDVSSMPPELTI*GNPDSKTQLRIIDDAWNNQHTV--HYAYILL 241 PP + E P S + D ++MPP L+ LR D++W TV H A++ L Sbjct: 604 PPWLMEQPPPPSRQTKPDAATMPPPLS--AQASVSYALRYDDESWRPLSTVDDHKAWLDL 661
Query: 242 CSSY 253 S+ Sbjct: 662 DESH 665
>sp|Q35054|CYB_MYOPA Cytochrome b OS=Myoprocta pratti GN=MT-CYB PE=3 SV=1 Length = 379
Score = 29.3 bits (64), Expect = 7.7 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = -1
Query: 236 VYMHSGPYVDYSMHHL*FLTESWNLGFPILLALVA 132 +Y+H G + Y + L +E+WN+G +LLA++A Sbjct: 94 IYLHIGRGIYYGSYTL---SETWNIGILLLLAVMA 125
>sp|P47866|CRFR2_RAT Corticotropin-releasing factor receptor 2 OS=Rattus norvegicus GN=Crhr2 PE=2 SV=1 Length = 411
Score = 29.3 bits (64), Expect = 7.7 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -1
Query: 248 YCRGVYMHSGPYVDYSMHHL---*FLTESWNLGFPILLALVALSLHQSCKLCFVSLVPQS 78 + G Y+H+ + YS HL FL W + PI++A L+ + C+ P Sbjct: 203 FVEGCYLHTAIVMTYSTEHLRKWLFLFIGWCIPCPIIVAWAVGKLYYENEQCWFGKEP-- 260
Query: 77 WKGGL**YVLKAP 39 G L Y+ + P Sbjct: 261 --GDLVDYIYQGP 271
>sp|Q5RB73|MTU1_PONAB Mitochondrial tRNA-specific 2-thiouridylase 1 OS=Pongo abelii GN=TRMU PE=2 SV=1 Length = 422
Score = 28.9 bits (63), Expect = 10.0 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2
Query: 275 GLRHPLHSEPKSSETSSIFVIHCLQHPFNHRTMIET*RRRW 397 GLR P + K S +FV HP +R ++ T R W Sbjct: 273 GLREPWYVVEKDSVKGDVFVAPRTDHPALYRDLLRTSRVHW 313
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A1CNU6 |
Definition |
tr|A1CNU6|A1CNU6_ASPCL DsDNA-dependent ATPase (Rad54b), putative OS=Aspergillus clavatus |
Align length |
70 |
Score (bit) |
34.7 |
E-value |
2.4 |
Report |
|