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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913379
Clone id YMU001_000029_F01
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATTCGCGGCCGCGAATTTGGTCAAGGAGAAGTGTACAGCTTGGAACCTTGTCATGCTGG
CAAACCATTTGACGACTCCTTGATGTTTTAACGAATTGAAAGATTCCACTTAAGTTTTCA
TGAAATCAAGTATAAGGTGGATGCTGGAAGAGCTTTGCTCTTGGCCTCTTTGACCTAAAG
AAATATAGTGCTTTTTAGCATGGAGCACAAGGTTTTGTTGGTGCTCTTAGCTTGCCCACT
GGGTTGCGGGTGATAGGGTGCTGATTTCCTCAATGTGCCATCATGATAGAGCAATGTAAC
TCATTCTTAATCGACATTCCAAAATTGTCAAAGATTCATAGATTTGTTGTTGAAACGTTA
TCTGCTTTCCGTGCAGATTTCTCCAAGCTACCTCTCTTAATTATTCTGTCAGACCTTTAT
AGGCTTGAAACTCAGTTCCTTTTTGGGGGAAAAGGTTTTACTCTGTATGACATCATGTTA
TGTCAAAAAATCGCATCATTTCATCATATTCAATACCGATCGATGCAACGA
■■Homology search results ■■ -
sp_hit_id Q2NQR6
Definition sp|Q2NQR6|ENGB_SODGM Probable GTP-binding protein engB OS=Sodalis glossinidius (strain morsitans)
Align length 71
Score (bit) 30.0
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913379|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_F01.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2NQR6|ENGB_SODGM Probable GTP-binding protein engB OS=Sodali...    30   6.5  
sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster G...    30   8.5  
sp|O77473|GST1B_ANOGA Glutathione S-transferase 1, isoform B OS=...    30   8.7  

>sp|Q2NQR6|ENGB_SODGM Probable GTP-binding protein engB OS=Sodalis
           glossinidius (strain morsitans) GN=engB PE=3 SV=1
          Length = 211

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = -3

Query: 223 QWAS*EHQQNLVLHAKKHYISLGQRGQEQSSSSIHLILDFM-KT*VESFNSLKHQGVVK- 50
           QWA   +   LVL  K   ++ G R +EQ +      L FM    VE+F+SLK QGV K 
Sbjct: 132 QWAVDVNIPVLVLLTKADKLASGSR-KEQLNQVREAALAFMGDVQVETFSSLKKQGVDKL 190

Query: 49  ------WFASM 35
                 WFA++
Sbjct: 191 RQKLDDWFAAI 201


>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds
            PE=1 SV=3
          Length = 3503

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -3

Query: 256  IEEISTLSPATQWAS*EHQQNLVLHAKKHYISLGQRGQEQSSSSIHLIL 110
            IE + +L PAT+      + NL++ AK H    GQ   ++SS ++HLI+
Sbjct: 1612 IELVKSLPPATEDVEKGGRFNLIIGAKDH----GQPEPKKSSLNLHLIV 1656


>sp|O77473|GST1B_ANOGA Glutathione S-transferase 1, isoform B
           OS=Anopheles gambiae GN=GstD1 PE=2 SV=1
          Length = 216

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +1

Query: 328 VVETLSAFRADFSKLPLLIILSDLYRLETQFLFGGKGFTLYDIMLCQKIASFHHIQY 498
           + E   A  A+F+K+   +   D +    +F+ GG G++L DI L   + +F    Y
Sbjct: 119 IFEGAPANEANFAKIGEALAFLDTFLEGERFVAGGNGYSLADISLYATLTTFEVAGY 175
tr_hit_id A5BWP0
Definition tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 51
Score (bit) 38.1
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913379|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_F01.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis...    38   0.26 
tr|Q0D712|Q0D712_ORYSJ Os07g0410500 protein OS=Oryza sativa subs...    37   0.75 
tr|A5C426|A5C426_VITVI Putative uncharacterized protein OS=Vitis...    37   0.75 
tr|Q2R664|Q2R664_ORYSJ Retrotransposon protein, putative, unclas...    36   0.98 
tr|Q9LMV1|Q9LMV1_ARATH F5M15.26 OS=Arabidopsis thaliana PE=4 SV=1      36   1.3  
tr|Q6L4N0|Q6L4N0_ORYSJ Putative uncharacterized protein P0530H10...    36   1.3  
tr|Q53KZ1|Q53KZ1_ORYSJ Retrotransposon protein, putative, unclas...    36   1.3  
tr|Q53JT7|Q53JT7_ORYSJ Retrotransposon protein, putative, unclas...    36   1.3  
tr|Q53J76|Q53J76_ORYSJ Retrotransposon protein, putative, unclas...    36   1.3  
tr|Q2QTE2|Q2QTE2_ORYSJ Retrotransposon protein, putative, unclas...    36   1.3  
tr|Q7XWW3|Q7XWW3_ORYSJ OSJNBb0058J09.16 protein OS=Oryza sativa ...    35   1.7  
tr|Q75H60|Q75H60_ORYSJ Putative reverse transcriptase OS=Oryza s...    35   1.7  
tr|Q6UUB2|Q6UUB2_ORYSJ Putative uncharacterized protein OS=Oryza...    35   1.7  
tr|Q6AU29|Q6AU29_ORYSJ Putative integrase (Retrotransposon prote...    35   1.7  
tr|Q2R3E6|Q2R3E6_ORYSJ Os11g0524800 protein OS=Oryza sativa subs...    35   1.7  
tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    35   1.7  
tr|A5BSX2|A5BSX2_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5BAW1|A5BAW1_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5ANF4|A5ANF4_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5AMM8|A5AMM8_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5C3U5|A5C3U5_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5C0A7|A5C0A7_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5BY14|A5BY14_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5BRN3|A5BRN3_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5AS76|A5AS76_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|Q8S6W4|Q8S6W4_ORYSA Putative pol polyprotein OS=Oryza sativa ...    35   2.9  
tr|Q8LM84|Q8LM84_ORYSJ Putative retroelement OS=Oryza sativa sub...    35   2.9  
tr|Q53NA3|Q53NA3_ORYSJ Retrotransposon protein, putative, unclas...    35   2.9  
tr|Q2R4I0|Q2R4I0_ORYSJ Retrotransposon protein, putative, unclas...    35   2.9  
tr|Q2QVH8|Q2QVH8_ORYSJ Retrotransposon protein, putative, unclas...    35   2.9  

>tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027782 PE=4 SV=1
          Length = 887

 Score = 38.1 bits (87), Expect = 0.26
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLYLIS*KL 94
           S P++PQ +GQAK+TNKTL + LK  +    ++AK K +      LI  KL
Sbjct: 782 STPHYPQTNGQAKATNKTLITALKKRL----EQAKGKWVEELPYVLIRKKL 828


>tr|Q0D712|Q0D712_ORYSJ Os07g0410500 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0410500 PE=4 SV=1
          Length = 563

 Score = 36.6 bits (83), Expect = 0.75
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTI 166
           + PYHPQ SGQAK+ NK + ++L++T+
Sbjct: 532 ATPYHPQTSGQAKTLNKQIKNILQNTV 558


>tr|A5C426|A5C426_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_012467 PE=4 SV=1
          Length = 799

 Score = 36.6 bits (83), Expect = 0.75
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSK 136
           S P +PQ +GQAK+TNKTL + LK  +    +EAK K
Sbjct: 730 STPRYPQSNGQAKATNKTLLNALKKML----EEAKGK 762


>tr|Q2R664|Q2R664_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g22130 PE=4 SV=1
          Length = 268

 Score = 36.2 bits (82), Expect = 0.98
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTI 166
           +APYHPQ SGQA+ +NK + ++L+ T+
Sbjct: 101 AAPYHPQTSGQAEMSNKQIKNILQKTV 127


>tr|Q9LMV1|Q9LMV1_ARATH F5M15.26 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1838

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -1

Query: 255  LRKSAPYHPQPSGQAKSTNKTLCSMLKSTI 166
            L KS P +PQ +GQA++TNKT+ S LK  +
Sbjct: 1640 LNKSTPRYPQGNGQAEATNKTILSGLKKRL 1669


>tr|Q6L4N0|Q6L4N0_ORYSJ Putative uncharacterized protein P0530H10.3
           (Putative uncharacterized protein OSJNOa0153K02.5)
           OS=Oryza sativa subsp. japonica GN=P0530H10.3 PE=4 SV=1
          Length = 903

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTI 166
           + PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 822 ATPYHPQTSGQAETSNKQIKNILQKTI 848


>tr|Q53KZ1|Q53KZ1_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g25720 PE=4 SV=1
          Length = 321

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 18/45 (40%), Positives = 28/45 (62%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLY 112
           + PYHPQ SGQA+++NK + ++L+ T+    K  K+K   A   Y
Sbjct: 169 ATPYHPQTSGQAETSNKQIKNILQKTVNEMGKAWKNKLSDALWAY 213


>tr|Q53JT7|Q53JT7_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g23130 PE=4 SV=1
          Length = 399

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTI 166
           + PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 127 ATPYHPQTSGQAETSNKQIKNILQKTI 153


>tr|Q53J76|Q53J76_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g22780 PE=4 SV=1
          Length = 248

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 18/45 (40%), Positives = 28/45 (62%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTIFL*VKEAKSKALPASTLY 112
           + PYHPQ SGQA+++NK + ++L+ T+    K  K+K   A   Y
Sbjct: 29  ATPYHPQTSGQAETSNKQIKNILQKTVDEMGKSWKNKLPDALWAY 73


>tr|Q2QTE2|Q2QTE2_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g19950 PE=4 SV=1
          Length = 270

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -1

Query: 246 SAPYHPQPSGQAKSTNKTLCSMLKSTI 166
           + PYHPQ SGQA+++NK + ++L+ TI
Sbjct: 127 ATPYHPQTSGQAETSNKQIKNILQKTI 153