BP913365
Clone id YMU001_000029_D11
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTACTCATGCAAACCAGGTTGGCACCATCCTTAACAGCATAGAAAACGATGCGGCTTGGG
ATGGAGCTAGAGTTTGCTTGCAGAGGAAAGATTTTCATGATGAACCTTCGAGTAAGCGAC
TTCGCATGCAGTTAGAGGATACCAATGTGACGGGGGAGGAACCTACCAGGAACAGTTGTG
CCTCTATGAGCAATAACAGCCTTGTGCAAGCAGAGAGCTCCTTCCATAATCATGGCTTCG
AGGCTGGCCAAGATGCAGTAAAAGCTTTTCGAGAGCAAGTTCTGGATAAGAGTTTTGGGC
TAGGCAGGGGGAAAGATTTTCCATCATGTGAAGTCCTGCCTGGTCAAAGTTAGAATGATG
AAGCTGTAGAGGTAACAATATCGCGTAAGACGCAGGGCAAGCAATGCAATGGTGACTGTG
TGGAGAGATGAAAGCAATGGCAGCTTGACATATCCAAGGCTAATCACCTTTTGTTACTGG
TTTCAAGCAGCTGAAAGTTTTTGAGCACCATTTCCTTTCAAATTTAAATCTGTAAGTTCT
TTTTGACCTAAAATCCTACATGCCACTGTCG
■■Homology search results ■■ -
sp_hit_id P98160
Definition sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens
Align length 36
Score (bit) 31.2
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913365|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D11.
(571 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate ... 31 3.8
sp|P0C6K7|NS1A_ANV1 Non-structural polyprotein 1A OS=Avian nephr... 31 4.9
sp|Q9JGF2|NS1AB_ANV1 Non-structural polyprotein 1AB OS=Avian nep... 31 4.9
sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate ... 31 5.0
sp|Q12697|ATC9_YEAST Probable cation-transporting ATPase 2 OS=Sa... 31 5.0
sp|Q8C0T7|MFSD9_MOUSE Major facilitator superfamily domain-conta... 30 8.4
sp|Q9SYI3|MDR5_ARATH Putative multidrug resistance protein 5 OS=... 30 8.4

>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate
proteoglycan core protein OS=Homo sapiens GN=HSPG2 PE=1
SV=3
Length = 4391

Score = 31.2 bits (69), Expect = 3.8
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1

Query: 457 LDMSSC--HCFHLSTQSPLHCLPCVLRDIVTSTASS 356
L S C H FHLS +P CLPC I ASS
Sbjct: 1302 LTCSHCRPHHFHLSASNPDGCLPCFCMGITQQCASS 1337


>sp|P0C6K7|NS1A_ANV1 Non-structural polyprotein 1A OS=Avian
nephritis virus 1 GN=ORF1 PE=3 SV=1
Length = 1005

Score = 30.8 bits (68), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3

Query: 467 VISLGYVKLPLLSSLHTVTIALLALRLTRYCYL 369
+ LGY+ +PL++ LH V + L A+ + CY+
Sbjct: 360 IYGLGYISIPLVTFLHWVGLVLKAILVPDDCYI 392


>sp|Q9JGF2|NS1AB_ANV1 Non-structural polyprotein 1AB OS=Avian
nephritis virus 1 GN=ORF1 PE=3 SV=1
Length = 1512

Score = 30.8 bits (68), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3

Query: 467 VISLGYVKLPLLSSLHTVTIALLALRLTRYCYL 369
+ LGY+ +PL++ LH V + L A+ + CY+
Sbjct: 360 IYGLGYISIPLVTFLHWVGLVLKAILVPDDCYI 392


>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate
proteoglycan core protein OS=Mus musculus GN=Hspg2 PE=1
SV=1
Length = 3707

Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1

Query: 439 HCFHLSTQSPLHCLPCVLRDIVTSTASS 356
H FHLS +P CLPC + ASS
Sbjct: 1310 HHFHLSASNPEGCLPCFCMGVTQQCASS 1337


>sp|Q12697|ATC9_YEAST Probable cation-transporting ATPase 2
OS=Saccharomyces cerevisiae GN=YOR291W PE=1 SV=1
Length = 1472

Score = 30.8 bits (68), Expect = 5.0
Identities = 32/134 (23%), Positives = 55/134 (41%)
Frame = -1

Query: 430 HLSTQSPLHCLPCVLRDIVTSTASSF*L*PGRTSHDGKSFPLPSPKLLSRTCSRKAFTAS 251
+L+ S HC VLRD +T SS L P G + + P + C ++
Sbjct: 542 NLAEMSHFHCDVRVLRDKFWTTISSSELVP------GDIYEVSDPNITILPCDSILLSSD 595

Query: 250 WPASKP*LWKELSACTRLLLLIEAQLFLVGSSPVTLVSSNCMRSRLLEGSS*KSFLCKQT 71
++ L E ++ E L T +SS +S L G++ + +
Sbjct: 596 CIVNESMLTGESVPVSKFPATEETMYQLCDDFQSTQISSFVSKSFLYNGTN----IIRAR 651

Query: 70 LAPSQAASFSMLLR 29
+AP Q A+ +M++R
Sbjct: 652 IAPGQTAALAMVVR 665


>sp|Q8C0T7|MFSD9_MOUSE Major facilitator superfamily
domain-containing protein 9 OS=Mus musculus GN=Mfsd9
PE=2 SV=1
Length = 466

Score = 30.0 bits (66), Expect = 8.4
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = -3

Query: 551 LGQKELTDLNLKGNGAQKLSAA*NQ*QKVISLGYVKLPLLSSLHTVTIALLALRLTRYCY 372
+G+ +TDL L GAQ Q V ++G + PLLS + L
Sbjct: 382 IGRTCITDLQLSVGGAQASGTVIGVGQSVTAVGRILAPLLSGVAQEISPCGPPSLGAALA 441

Query: 371 LYSFIILTLTRQDFT 327
L + +I+TL R F+
Sbjct: 442 LVAILIMTLNRPPFS 456


>sp|Q9SYI3|MDR5_ARATH Putative multidrug resistance protein 5
OS=Arabidopsis thaliana GN=MDR5 PE=3 SV=1
Length = 1230

Score = 30.0 bits (66), Expect = 8.4
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3

Query: 96 HDEPSSKRLRMQ---LEDTNVTGEEPTRNSCASMSNNSLVQAESSFHNHGFEAGQDAVKA 266
H+ S+ LR+Q E + + + +S +S NNS Q + SF G AGQD+ K
Sbjct: 580 HEGAYSQLLRLQEINKESKRLEISDGSISSGSSRGNNSTRQDDDSFSVLGLLAGQDSTKM 639

Query: 267 FREQVLDKSF 296
+E SF
Sbjct: 640 SQELSQKVSF 649


tr_hit_id Q7XS29
Definition tr|Q7XS29|Q7XS29_ORYSJ OSJNBa0080E14.7 protein OS=Oryza sativa subsp. japonica
Align length 90
Score (bit) 33.9
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913365|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D11.
(571 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XS29|Q7XS29_ORYSJ OSJNBa0080E14.7 protein OS=Oryza sativa s... 34 6.5
tr|Q6P7I1|Q6P7I1_XENLA MGC68578 protein OS=Xenopus laevis GN=chm... 33 8.5
tr|Q9FIX8|Q9FIX8_ARATH S-locus protein 4-like (At5g43620) OS=Ara... 33 8.5
tr|B6AK08|B6AK08_9CRYT AP2 domain-containing protein OS=Cryptosp... 33 8.5
tr|B6GZP8|B6GZP8_PENCH Pc12g05830 protein OS=Penicillium chrysog... 33 8.5

>tr|Q7XS29|Q7XS29_ORYSJ OSJNBa0080E14.7 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0080E14.7 PE=4 SV=2
Length = 362

Score = 33.9 bits (76), Expect = 6.5
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Frame = +3

Query: 21 GTILNSIENDAAWDGARVCLQRKDFHDEPSS--------------KRLRMQLEDTNVTGE 158
G +L + D AR+ +RKD H+ SS K ++ ++D
Sbjct: 180 GLVLRRLYQVTCEDMARIWRERKDTHESSSSSSSGRFIDVLSMVTKLFQLHVDDPTSASR 239

Query: 159 EPTRNSCASMSNNSLVQAESSFHNHGFEAG 248
P R A+M ++ + + +HG AG
Sbjct: 240 TPERKKLAAMLRDNAYNGDQNVRSHGVFAG 269


>tr|Q6P7I1|Q6P7I1_XENLA MGC68578 protein OS=Xenopus laevis GN=chm
PE=2 SV=1
Length = 643

Score = 33.5 bits (75), Expect = 8.5
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3

Query: 260 YCILASLEAMIMEGALCLHKAVIAHRGTTVPGRFL 156
YC+ SLE ++++G L KAVI HRG V ++L
Sbjct: 387 YCLHHSLECLVVDGDSKLCKAVIDHRGKRVDCKYL 421


>tr|Q9FIX8|Q9FIX8_ARATH S-locus protein 4-like (At5g43620)
OS=Arabidopsis thaliana GN=At5g43620 PE=2 SV=1
Length = 410

Score = 33.5 bits (75), Expect = 8.5
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +3

Query: 21 GTILNSIENDAAWDGARVCLQRKDFHDEPSSKRLRMQLEDTNVTGEEPTRNSCASMSNNS 200
GT + ++ + G C Q + P KR R QL+ +G P + ++ +NN
Sbjct: 16 GTTMKRRNDNRGYGGGIGCYQEERNRYAPPQKRFRSQLQQQFRSGHNPLYHYGSNTNNNV 75

Query: 201 LVQAESSFHNHGFE 242
+ S++N+G +
Sbjct: 76 SRVSSQSYNNYGVD 89


>tr|B6AK08|B6AK08_9CRYT AP2 domain-containing protein
OS=Cryptosporidium muris RN66 GN=CMU_003880 PE=4 SV=1
Length = 824

Score = 33.5 bits (75), Expect = 8.5
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Frame = +3

Query: 27 ILNSIENDAAWDGARVCLQ------RKDFHDEPSSKRLRM--------QLEDTNVTGEEP 164
I +S N+ D R+C + +K DE S+ RL + +LED ++ G+ P
Sbjct: 92 INHSSNNNDIDDNNRICNEDNSEECKKMIEDEESNNRLPLSHFNKQCSRLEDKSILGKTP 151

Query: 165 TRNSCASMSNNSLVQAESSFHNH 233
R S NN+ SS H++
Sbjct: 152 KRIKIISEENNNTNSTSSSIHSN 174


>tr|B6GZP8|B6GZP8_PENCH Pc12g05830 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc12g05830 PE=4 SV=1
Length = 2059

Score = 33.5 bits (75), Expect = 8.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -3

Query: 182 GTTVPGRFLPRHIGIL*LHAKSLTRRFIMKIFP-LQANSSSIPSRIVFYAVKDG 24
G ++ G +P H ++ L A I+K++P LQ + SS P++++ A+K G
Sbjct: 240 GKSLYGLLVPFHSNVMRLFAADRRASTILKVYPSLQLSDSSSPAQVILAALKSG 293