BP913327 |
Clone id |
YMU001_000029_A08 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_A08. |
Accession |
BP913327 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCACATTACGCCAGAGACGAACGAAGCTTTCTCAAACTGAGGTTCAATTCGCTGTTGGC CAAGTGGATGGTCTTTAGTTTTCATCCTTCCCATTATTAGGAATGCTTATGCCAGCTTCA GCAAGATGACAGTCTTGCAAGTCCAGGAAAGCAGCTCCTTGCCAGGACAGCTCTTCTGAC AGCTGGAAAATACTTTCTTGACGAAGCTTGGCACTCAACTGCATCCATTGCATTAGCTGC TTAAACTTTCTCTCTCTTTGATCGATGGAGTTGACTTTTGTCTCAACAAGAGTTAATTTT TCCCTGGTTTGCTCCAAAGCTTCAGACAGGTCCCTGCACTTGGCTGATAGCTCTCCACAC CTAGGGCAGCACTCTTCACTCTCTTGTCTCTTGTGCCCAAATCTTTTGCTGCAGGTATGA AGTGCAAAGGGAGAAGACTTTGGGTCTTCTTGTTCAAAAACATCAGCAACAATAGTGCTC CCAGCATGGCCTTTCTGCTGGCCTTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6UWE0 |
Definition |
sp|Q6UWE0|LRSM1_HUMAN E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens |
Align length |
71 |
Score (bit) |
35.4 |
E-value |
0.15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RRU8 |
Definition |
tr|A9RRU8|A9RRU8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
90 |
Score (bit) |
40.0 |
E-value |
0.064 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913327|Adiantum capillus-veneris mRNA, clone: YMU001_000029_A08. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RRU8|A9RRU8_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.064 tr|Q6GQ03|Q6GQ03_XENLA LOC443595 protein (Fragment) OS=Xenopus l... 39 0.14 tr|Q298K1|Q298K1_DROPS GA19376 OS=Drosophila pseudoobscura pseud... 37 0.54 tr|B4MBY9|B4MBY9_DROVI GJ14200 OS=Drosophila virilis GN=GJ14200 ... 37 0.54 tr|B4G420|B4G420_DROPE GL23404 OS=Drosophila persimilis GN=GL234... 37 0.54 tr|A0BIP7|A0BIP7_PARTE Chromosome undetermined scaffold_11, whol... 37 0.54 tr|Q69ZV8|Q69ZV8_MOUSE MKIAA0912 protein (Fragment) OS=Mus muscu... 37 0.71 tr|A2AUM9|A2AUM9_MOUSE Centrosomal protein 152 OS=Mus musculus G... 37 0.71 tr|Q2YDP0|Q2YDP0_BOVIN Testis-specific kinase substrate OS=Bos t... 37 0.71 tr|Q147V4|Q147V4_MOUSE Serine/threonine kinase 22 substrate 1 OS... 36 0.92 tr|A8YHT7|A8YHT7_MICAE Genome sequencing data, contig C315 OS=Mi... 36 0.92 tr|A8QC99|A8QC99_BRUMA Protein kinase domain containing protein ... 36 0.92 tr|Q0SWG0|Q0SWG0_CLOPS Exonuclease SbcC OS=Clostridium perfringe... 36 1.2 tr|B0JH18|B0JH18_MICAN DNA mismatch repair protein OS=Microcysti... 36 1.2 tr|B1RRS9|B1RRS9_CLOPE Exonuclease SbcC OS=Clostridium perfringe... 36 1.2 tr|B1BUF2|B1BUF2_CLOPE Exonuclease SbcC OS=Clostridium perfringe... 36 1.2 tr|Q551A6|Q551A6_DICDI Putative uncharacterized protein OS=Dicty... 36 1.2 tr|B7ZRD5|B7ZRD5_XENLA Putative uncharacterized protein OS=Xenop... 35 1.6 tr|Q312W5|Q312W5_DESDG Putative uncharacterized protein OS=Desul... 35 1.6 tr|B3WDS4|B3WDS4_LACCB Histidine protein kinase; sensor protein ... 35 1.6 tr|Q08E63|Q08E63_BOVIN Leucine rich repeat and sterile alpha mot... 35 1.6 tr|B4JIG6|B4JIG6_DROGR GH18493 OS=Drosophila grimshawi GN=GH1849... 35 1.6 tr|A0D1Y3|A0D1Y3_PARTE Chromosome undetermined scaffold_342, who... 35 1.6 tr|A8F771|A8F771_THELT Putative uncharacterized protein OS=Therm... 35 2.1 tr|Q233E2|Q233E2_TETTH Putative uncharacterized protein OS=Tetra... 35 2.1 tr|A8X4D3|A8X4D3_CAEBR CBR-RBG-1 protein OS=Caenorhabditis brigg... 35 2.1 tr|Q2KG44|Q2KG44_MAGGR Putative uncharacterized protein OS=Magna... 35 2.1 tr|A4RBY8|A4RBY8_MAGGR Predicted protein OS=Magnaporthe grisea G... 35 2.1 tr|A4R304|A4R304_MAGGR Predicted protein OS=Magnaporthe grisea G... 35 2.1 tr|Q0W592|Q0W592_UNCMA 2-cysteine peroxiredoxin OS=Uncultured me... 35 2.1
>tr|A9RRU8|A9RRU8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160665 PE=4 SV=1 Length = 1363
Score = 40.0 bits (92), Expect = 0.064 Identities = 28/90 (31%), Positives = 43/90 (47%) Frame = -3
Query: 374 ECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLMQWMQLSAKLRQE 195 +CC RC L ++C LS AL++ R K + K ++RE++ + L Q +Q Q Sbjct: 700 DCCSRCESLVSQCEQLSVALKEARRK---QQEKDRLAEEREKQIRHLTQLLQSG---EQG 753
Query: 194 SIFQLSEELSWQGAAFLDLQDCHLAEAGIS 105 S Q+ LDL D H+ E +S Sbjct: 754 SFLQV-----------LDLLDEHMPEEYLS 772
>tr|Q6GQ03|Q6GQ03_XENLA LOC443595 protein (Fragment) OS=Xenopus laevis GN=LOC443595 PE=2 SV=1 Length = 403
Score = 38.9 bits (89), Expect = 0.14 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%) Frame = -3
Query: 392 KRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQ----RERKFKQLMQW 225 K +E+EE + + + L E E+ + + ++ K++ +D ++RK +Q+++ Sbjct: 261 KMKENEEELEKMKKQGKQDEPLQERCEELEKTVANLKEKIHHLDDMLKSQQRKVRQMIEQ 320
Query: 224 MQLSAKLRQES---IFQLSEELSWQGAAFLDLQD 132 +Q S QE I +L E++SW A L+LQD Sbjct: 321 LQNSRTAMQEKDTVIQELREKVSWLQAENLELQD 354
>tr|Q298K1|Q298K1_DROPS GA19376 OS=Drosophila pseudoobscura pseudoobscura GN=GA19376 PE=4 SV=1 Length = 2042
Score = 37.0 bits (84), Expect = 0.54 Identities = 26/97 (26%), Positives = 46/97 (47%) Frame = -3
Query: 422 LHTCSKRFGHKRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKF 243 L S+ G + E+C +C +L + R L +E+L VE + + +D + Sbjct: 1565 LAATSEENGQNEERLEKCRQQCSKLDNEKRQL-------QEELAKVEGRASKLDLQRVAM 1617
Query: 242 KQLMQWMQLSAKLRQESIFQLSEELSWQGAAFLDLQD 132 + + +Q++ + + SI QLSE L Q A L+D Sbjct: 1618 EGDLTRLQMALQEKDCSIRQLSERLENQNRALTQLED 1654
>tr|B4MBY9|B4MBY9_DROVI GJ14200 OS=Drosophila virilis GN=GJ14200 PE=4 SV=1 Length = 2020
Score = 37.0 bits (84), Expect = 0.54 Identities = 25/97 (25%), Positives = 47/97 (48%) Frame = -3
Query: 422 LHTCSKRFGHKRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKF 243 L S+ G + E+C CG+L + R L +E+L VE + + +D + Sbjct: 1549 LAATSEENGQNEERLEKCRQMCGKLDNEKRTL-------QEELAKVEGRASKLDLQRVAM 1601
Query: 242 KQLMQWMQLSAKLRQESIFQLSEELSWQGAAFLDLQD 132 + + +Q++ + + +I Q+SE L Q A + L+D Sbjct: 1602 EGDLARLQMALQEKDCNIRQVSERLENQNRAMIQLED 1638
>tr|B4G420|B4G420_DROPE GL23404 OS=Drosophila persimilis GN=GL23404 PE=4 SV=1 Length = 1624
Score = 37.0 bits (84), Expect = 0.54 Identities = 26/97 (26%), Positives = 46/97 (47%) Frame = -3
Query: 422 LHTCSKRFGHKRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKF 243 L S+ G + E+C +C +L + R L +E+L VE + + +D + Sbjct: 1147 LAATSEENGQNEERLEKCRQQCSKLDNEKRQL-------QEELAKVEGRASKLDLQRVAM 1199
Query: 242 KQLMQWMQLSAKLRQESIFQLSEELSWQGAAFLDLQD 132 + + +Q++ + + SI QLSE L Q A L+D Sbjct: 1200 EGDLTRLQMALQEKDCSIRQLSERLENQNRALTQLED 1236
>tr|A0BIP7|A0BIP7_PARTE Chromosome undetermined scaffold_11, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00004786001 PE=4 SV=1 Length = 343
Score = 37.0 bits (84), Expect = 0.54 Identities = 22/50 (44%), Positives = 27/50 (54%) Frame = -3
Query: 338 CRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLMQWMQLSAKLRQESI 189 C ++EALEQT E L S RE++ K + QWMQ KL QE I Sbjct: 162 CEKMNEALEQTIETLNQ-----KSQTSREKQNKDVQQWMQKFKKLEQEYI 206
>tr|Q69ZV8|Q69ZV8_MOUSE MKIAA0912 protein (Fragment) OS=Mus musculus GN=Cep152 PE=2 SV=1 Length = 1793
Score = 36.6 bits (83), Expect = 0.71 Identities = 26/86 (30%), Positives = 44/86 (51%) Frame = -3
Query: 341 KCRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLMQWMQLSAKLRQESIFQLSEELSW 162 +CR+ EA +Q+++ + +ETK D E+ KQL W++ S + +E I QL E+ Sbjct: 620 ECRETMEAFQQSKDGDSGMETKT---DTSEKTTKQL--WLESSEAINREDILQLKNEVQ- 673
Query: 161 QGAAFLDLQDCHLAEAGISIPNNGKD 84 L Q+ L EA + + +D Sbjct: 674 ----VLQKQNQELKEAEEKLRSTNQD 695
>tr|A2AUM9|A2AUM9_MOUSE Centrosomal protein 152 OS=Mus musculus GN=Cep152 PE=4 SV=1 Length = 1736
Score = 36.6 bits (83), Expect = 0.71 Identities = 26/86 (30%), Positives = 44/86 (51%) Frame = -3
Query: 341 KCRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLMQWMQLSAKLRQESIFQLSEELSW 162 +CR+ EA +Q+++ + +ETK D E+ KQL W++ S + +E I QL E+ Sbjct: 563 ECRETMEAFQQSKDGDSGMETKT---DTSEKTTKQL--WLESSEAINREDILQLKNEVQ- 616
Query: 161 QGAAFLDLQDCHLAEAGISIPNNGKD 84 L Q+ L EA + + +D Sbjct: 617 ----VLQKQNQELKEAEEKLRSTNQD 638
>tr|Q2YDP0|Q2YDP0_BOVIN Testis-specific kinase substrate OS=Bos taurus GN=TSKS PE=2 SV=1 Length = 565
Score = 36.6 bits (83), Expect = 0.71 Identities = 34/114 (29%), Positives = 49/114 (42%) Frame = -3
Query: 410 SKRFGHKRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLM 231 S+ +RQE+EE C +L CR ++ ++E K ++ K NS E K + L Sbjct: 171 SENLEKRRQEAEELEGYCSQLKENCRKVTRSVEDAEIKTNVL--KQNSA-LLEEKLRYLQ 227
Query: 230 QWMQLSAKLRQESIFQLSEELSWQGAAFLDLQDCHLAEAGISIPNNGKDEN*RP 69 Q +Q RQE+ Q E+ G + L G S P DE RP Sbjct: 228 QQLQDETPRRQEAELQELEQKLEAGLSRHGLGPA-TQPPGCSGPPGSPDEPLRP 280
>tr|Q147V4|Q147V4_MOUSE Serine/threonine kinase 22 substrate 1 OS=Mus musculus GN=Stk22s1 PE=2 SV=1 Length = 525
Score = 36.2 bits (82), Expect = 0.92 Identities = 25/80 (31%), Positives = 39/80 (48%) Frame = -3
Query: 410 SKRFGHKRQESEECCPRCGELSAKCRDLSEALEQTREKLTLVETKVNSIDQRERKFKQLM 231 S+ +RQE+EE C +L CR ++ ++E K ++ K NS E K + L Sbjct: 170 SENLERRRQEAEELEGYCSQLKENCRKVTRSVEDAEIKTNVL--KQNSA-LLEEKLRYLQ 226
Query: 230 QWMQLSAKLRQESIFQLSEE 171 Q +Q RQE+ Q E+ Sbjct: 227 QQLQDETPRRQEAELQELEQ 246
|