BP913312
Clone id YMU001_000028_H04
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGACACTTAAGAAGGGGGGACTTGAAGTGGGTTGGGGGAAGGGATTTCACCTTTACATTG
AGCACTAGCAAGTATAGCATGCTTGCACTAAAGTACAGTTATTCAAATATCTGCATCTGT
CCTACCTGTATAAAGCAAAAAATGTATAATCTTCCTGTTTTGAACCTAATCTTCAAACGC
CATACAATGAGCAATACACGGGACCCAAGCCAGCGCTCCTGTCTTAACCACCTGCTTAGA
ATCTCTCCAGATACACTCCCATTCGCTTTCTCTGCTTAGCCTTTCATCGATGCCTTTATC
ATCAAACATCTTCATGACGTTGTGCACATCTAGCCTCCAGACCTCTGCCGGTACGTCTGA
AATTACATGATGATTGAAGGGATCTACTTTGATCTTGCCTGTTAAGGCATAAAGCTGCAA
GGAATGTCCAACCAA
■■Homology search results ■■ -
sp_hit_id Q28661
Definition sp|Q28661|PROC_RABIT Vitamin K-dependent protein C (Fragment) OS=Oryctolagus cuniculus
Align length 51
Score (bit) 33.1
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913312|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_H04.
(435 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q28661|PROC_RABIT Vitamin K-dependent protein C (Fragment) OS... 33 0.52
sp|Q80ZD3|S2611_MOUSE Sodium-independent sulfate anion transport... 31 1.9
sp|Q9Y765|FNTA_CANAL Protein farnesyltransferase/geranylgeranylt... 31 2.0
sp|Q28278|PROC_CANFA Vitamin K-dependent protein C OS=Canis fami... 31 2.6
sp|P00745|PROC_BOVIN Vitamin K-dependent protein C (Fragment) OS... 30 4.4
sp|Q8KA55|RIBB_BUCAP 3,4-dihydroxy-2-butanone 4-phosphate syntha... 29 9.8
sp|Q9GLP2|PROC_PIG Vitamin K-dependent protein C OS=Sus scrofa G... 29 9.8
sp|Q748I9|ENGB_GEOSL Probable GTP-binding protein engB OS=Geobac... 29 9.8

>sp|Q28661|PROC_RABIT Vitamin K-dependent protein C (Fragment)
OS=Oryctolagus cuniculus GN=PROC PE=2 SV=1
Length = 458

Score = 33.1 bits (74), Expect = 0.52
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = -1

Query: 315 MKMFDDKGIDERLSR--ESEWECIWRDSKQVVKTGA----LAWVPCIAHCM 181
M D + ID +L+R +S W+ I DSK+ + GA ++WV AHCM
Sbjct: 202 MDEVDPRLIDGKLTRRGDSPWQVILLDSKKKLACGAVLIHVSWVLTAAHCM 252


>sp|Q80ZD3|S2611_MOUSE Sodium-independent sulfate anion transporter
OS=Mus musculus GN=Slc26a11 PE=2 SV=2
Length = 593

Score = 31.2 bits (69), Expect = 1.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2

Query: 134 FIQVGQMQIFE*LYFSASMLYLLVLNVKVKSLPPTHFKSPL 12
F+ +G+ ++ + + ASML LLVL + +PP H + PL
Sbjct: 174 FLHIGETRVGDAVLGLASMLLLLVLKCMREHMPPPHPEMPL 214


>sp|Q9Y765|FNTA_CANAL Protein
farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Candida albicans GN=RAM2 PE=1 SV=1
Length = 306

Score = 31.2 bits (69), Expect = 2.0
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1

Query: 405 LTGKIKVDPFNHHVISDVPAEVWRLDVHNVMK--MFDDKGIDERLSRESEW 259
L + DP NHHV S V D+HN K F DK ID L S W
Sbjct: 133 LEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 183


>sp|Q28278|PROC_CANFA Vitamin K-dependent protein C OS=Canis
familiaris GN=PROC PE=2 SV=2
Length = 456

Score = 30.8 bits (68), Expect = 2.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = -1

Query: 321 NVMKMFDDKGIDERLSR--ESEWECIWRDSKQVVKTGAL----AWVPCIAHCM 181
N D + ++ +++R ES W+ + DSK+ + GA+ +WV AHCM
Sbjct: 202 NQTDQIDPRLVNGKVTRRGESPWQVVLLDSKKKLACGAVLIHTSWVLTAAHCM 254


>sp|P00745|PROC_BOVIN Vitamin K-dependent protein C (Fragment)
OS=Bos taurus GN=PROC PE=1 SV=1
Length = 456

Score = 30.0 bits (66), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = -1

Query: 270 ESEWECIWRDSKQVVKTGA----LAWVPCIAHCM 181
ES W+ + DSK+ + GA ++WV +AHC+
Sbjct: 221 ESPWQAVLLDSKKKLVCGAVLIHVSWVLTVAHCL 254


>sp|Q8KA55|RIBB_BUCAP 3,4-dihydroxy-2-butanone 4-phosphate synthase
OS=Buchnera aphidicola subsp. Schizaphis graminum
GN=ribB PE=3 SV=1
Length = 213

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1

Query: 43 DFTFTLSTSKYSMLALKYSYSN--ICICPTCIKQKMYNLPVL 162
D F+ T +AL Y + +C+C T K+K NLP++
Sbjct: 42 DLVFSSETMTVEQMALTIRYGSGIVCLCITESKRKKLNLPMM 83


>sp|Q9GLP2|PROC_PIG Vitamin K-dependent protein C OS=Sus scrofa
GN=PROC PE=2 SV=1
Length = 459

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -1

Query: 270 ESEWECIWRDSKQVVKTGA----LAWVPCIAHCM 181
ES W+ I DSK+ + GA ++WV AHC+
Sbjct: 224 ESPWQVILLDSKKKLACGAVLIHVSWVLTAAHCL 257


>sp|Q748I9|ENGB_GEOSL Probable GTP-binding protein engB OS=Geobacter
sulfurreducens GN=engB PE=3 SV=1
Length = 206

Score = 28.9 bits (63), Expect = 9.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1

Query: 139 KMYNLPVLNLIFKRHTMSNTRDPSQRSCLNHLLRISPDTLPFAFSA 276
+ Y++PVL +I K +S Q S ++ L ++PD + F FSA
Sbjct: 132 RAYDIPVLVVITKCDKVSKNERAKQASLISRTLGLAPDEMAF-FSA 176


tr_hit_id Q93SS8
Definition tr|Q93SS8|Q93SS8_PLESH HugW OS=Plesiomonas shigelloides
Align length 42
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913312|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_H04.
(435 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q93SS8|Q93SS8_PLESH HugW OS=Plesiomonas shigelloides GN=hugW ... 35 2.4
tr|A0CV65|A0CV65_PARTE Chromosome undetermined scaffold_29, whol... 33 5.4
tr|B6SQX4|B6SQX4_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.1
tr|Q5TXJ7|Q5TXJ7_ANOGA AGAP012584-PA (Fragment) OS=Anopheles gam... 33 7.1

>tr|Q93SS8|Q93SS8_PLESH HugW OS=Plesiomonas shigelloides GN=hugW
PE=4 SV=1
Length = 451

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1

Query: 196 TRDPSQRSCLNHLLRISPDTLPFAFSA*PFIDAFIIKHLHDV 321
TRD +RS NHL + + D LP A FID F + D+
Sbjct: 305 TRDTRERSRYNHLAKTTADVLPAGAGAGGFIDGFALMQTRDL 346


>tr|A0CV65|A0CV65_PARTE Chromosome undetermined scaffold_29, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00010850001 PE=4 SV=1
Length = 572

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1

Query: 37 GRDFTFTLSTSKYSMLALKYSYSNICICPTCIKQKMYNLPVLNLIFKRHTMSNT 198
G FT + K SML YSY N I T IK+++ +LN + K++T NT
Sbjct: 231 GAQAVFTFNCGKKSMLYYSYSYQNQAIDITKIKEQL----LLNRLGKQYTNVNT 280


>tr|B6SQX4|B6SQX4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 66

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1

Query: 121 PTCIKQKMYNLPVLNLIFKRHTMSNTRDPSQRSCLNHLLRI-SPDTLP 261
P +K MY P+LN+ K H N+ +P + H++RI P+TLP
Sbjct: 4 PLRVKDHMYGSPILNI--KWHQTLNSTEPKLITADKHIVRIWDPNTLP 49


>tr|Q5TXJ7|Q5TXJ7_ANOGA AGAP012584-PA (Fragment) OS=Anopheles
gambiae str. PEST GN=AgaP_AGAP012584 PE=4 SV=3
Length = 397

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1

Query: 76 SMLALKYSYSNICICPTCIKQKMYNLPVLNLIFKRHTMSNTRDPSQRSCLNHLL 237
+M+ LK Y+N+ PTC+ + + N+ VLNL + T + + SQ L L+
Sbjct: 113 NMVILKLDYNNLTTIPTCL-ESLVNVTVLNLAHNQVTHATIQKFSQMKRLRELV 165