BP913230 |
Clone id |
YMU001_000027_H10 |
Library |
YMU01 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000027_H10. |
Accession |
BP913230 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1140Contig1 |
Sequence |
GCAAAAGTGGACATCAGCGGAAGAGGCTGCATTGAGGACAGGAGTGAAGAAGCATGGACT TGGTAAATGGCGTGCAATCCAGAAAGACCCGGAGTTTACTTTTCTGCTTGCCACTCGCTC TAATGTGGACCTGAAGGACAAATGGAGGAACATGAACATTGGAGTTGGGGGATATATATC CAGGGAAAAGCCGTCCAAGTCATCCAAACTTAAAGCCTTGAAAAGTTCTGATGAACCCAT CTCACCTCGTCCATTAGCTATTCTTCCAGGTGAATATGTCTCTGCGGATGATAGTTATGG CGCAGCTGATGCATTGGTGTCCTCTGATAGCCCTAAGGAGTCGAAGTCGTTGGGTCCAAG ATACACGGACATGGTGATCGATGCAATCTTGGATCTAAATAGTCCTAATGGTGCAAGCAG TAGTGATATTGCTGCCAGTATTGAAGCAAATAATTTGGTACCAGCCAATTTTAGAAGGCT TTTAAGATTGAAACTGAAGGATATGGTAAAAGATGGCAGCTTATTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q15554 |
Definition |
sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens |
Align length |
51 |
Score (bit) |
45.4 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T749 |
Definition |
tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
130.0 |
E-value |
5.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913230|Adiantum capillus-veneris mRNA, clone: YMU001_000027_H10. (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitre... 130 5e-29 tr|B8A8C4|B8A8C4_ORYSI Putative uncharacterized protein OS=Oryza... 126 6e-28 tr|Q8GUA0|Q8GUA0_ORYSJ MYB28 protein (Os01g0708000 protein) OS=O... 118 2e-25 tr|A7PE46|A7PE46_VITVI Chromosome chr11 scaffold_13, whole genom... 118 2e-25 tr|A7QL84|A7QL84_VITVI Chromosome chr3 scaffold_117, whole genom... 115 2e-24 tr|Q8S270|Q8S270_ORYSJ Putative single myb histone 6 (Putative u... 113 7e-24 tr|Q0JLM2|Q0JLM2_ORYSJ Os01g0589300 protein OS=Oryza sativa subs... 113 7e-24 tr|A2WRZ9|A2WRZ9_ORYSI Putative uncharacterized protein OS=Oryza... 113 7e-24 tr|Q8W119|Q8W119_MAIZE Histone H1-like protein OS=Zea mays GN=ho... 112 1e-23 tr|Q6WLH2|Q6WLH2_MAIZE Single myb histone 4 OS=Zea mays GN=Smh4 ... 112 1e-23 tr|A7R475|A7R475_VITVI Chromosome undetermined scaffold_623, who... 112 1e-23 tr|Q6WLH4|Q6WLH4_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-23 tr|B8LR63|B8LR63_PICSI Putative uncharacterized protein OS=Picea... 111 2e-23 tr|Q6WS85|Q6WS85_MAIZE Single myb histone 1 (Putative uncharacte... 110 4e-23 tr|B4FT40|B4FT40_MAIZE Putative uncharacterized protein OS=Zea m... 109 7e-23 tr|B6TMI8|B6TMI8_MAIZE Single myb histone 1 OS=Zea mays PE=2 SV=1 108 1e-22 tr|Q9LPL9|Q9LPL9_ARATH F2J10.16 protein OS=Arabidopsis thaliana ... 105 1e-21 tr|Q8VX39|Q8VX39_ARATH Telomere repeat binding factor 1 OS=Arabi... 105 1e-21 tr|Q8VWK4|Q8VWK4_ARATH Telomere repeat binding factor 1 (MYB tra... 105 1e-21 tr|Q8LA70|Q8LA70_ARATH DNA-binding protein PcMYB1, putative OS=A... 105 1e-21 tr|Q6WLH1|Q6WLH1_MAIZE Single myb histone 6 OS=Zea mays GN=Smh6 ... 105 2e-21 tr|Q761Y7|Q761Y7_ORYSJ BRI1-KD interacting protein 127 (Fragment... 104 3e-21 tr|Q2QM89|Q2QM89_ORYSJ Os12g0613300 protein OS=Oryza sativa subs... 104 3e-21 tr|B8BMZ7|B8BMZ7_ORYSI Putative uncharacterized protein OS=Oryza... 104 3e-21 tr|A3CJE3|A3CJE3_ORYSJ Putative uncharacterized protein OS=Oryza... 104 3e-21 tr|Q0PJJ3|Q0PJJ3_SOYBN MYB transcription factor MYB107 OS=Glycin... 100 3e-20 tr|A5CB69|A5CB69_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|Q2LMD5|Q2LMD5_MALDO MYBR6 OS=Malus domestica PE=2 SV=1 99 1e-19 tr|Q6WLH3|Q6WLH3_MAIZE Single myb histone 5 (Putative uncharacte... 97 6e-19 tr|B6TCK5|B6TCK5_MAIZE Single myb histone 6 OS=Zea mays PE=2 SV=1 96 8e-19
>tr|A9T749|A9T749_PHYPA Single myb histone protein OS=Physcomitrella patens subsp. patens GN=SMH1501 PE=4 SV=1 Length = 345
Score = 130 bits (326), Expect = 5e-29 Identities = 77/176 (43%), Positives = 101/176 (57%), Gaps = 1/176 (0%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWT+ EEAALR GV+K+G GKWRAIQKD +F L +RSNVDLKDKWRNM++ G S Sbjct: 6 QKWTAEEEAALRAGVEKYGPGKWRAIQKDSKFGPCLTSRSNVDLKDKWRNMSVSANGLGS 65
Query: 182 -REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLGP 358 R+ ++ +S PLA+LP DD+ A S+D+ + KSLG Sbjct: 66 ARKPLAITGGPGMMTLMEDAVSVLPLAVLP----PIDDA--QALKRESADTSGDRKSLGS 119
Query: 359 RYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSLL 526 RY DMV +A++ L G + VP+NFRRLL KLK++ G L+ Sbjct: 120 RYDDMVFEAVMGLKETYGSSNASIASYIEERHAVPSNFRRLLTTKLKELALAGKLV 175
>tr|B8A8C4|B8A8C4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03454 PE=4 SV=1 Length = 306
Score = 126 bits (317), Expect = 6e-28 Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 1/170 (0%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWTS EE ALR GV KHG GKWR IQKDPEF+ +L++RSN+DLKDKWRN++ G S Sbjct: 6 QKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSASGLGS 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLG-P 358 R+ P S PL +LP V A+A S+D K S+ + P Sbjct: 66 RD-KLKVPRIKGPSSSTSPSSQTPLLVLPPNKV--------AEASPSADPEKSSQDVKIP 116
Query: 359 RYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMV 508 +Y+ MVI+A+ ++ PNG + V ANFRRLL KL+ ++ Sbjct: 117 KYSSMVIEALCEIGDPNGSDVDAICHYIEQRHEVQANFRRLLTAKLRRLI 166
>tr|Q8GUA0|Q8GUA0_ORYSJ MYB28 protein (Os01g0708000 protein) OS=Oryza sativa subsp. japonica GN=myb28 PE=2 SV=1 Length = 304
Score = 118 bits (295), Expect = 2e-25 Identities = 71/169 (42%), Positives = 92/169 (54%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWTS EE ALR GV KHG GKWR IQKDPEF+ +L++RSN+DLKDKWRN++ G S Sbjct: 6 QKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSASGLGS 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLGPR 361 R+ P S PL +LP V A+A S+D K S+ + Sbjct: 66 RD-KLKVPRIKGPSSSTSPSSQTPLLVLPPNKV--------AEASPSADPEKSSQDV-KI 115
Query: 362 YTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMV 508 MVI+A+ ++ PNG + V ANFRRLL KL+ ++ Sbjct: 116 PNSMVIEALCEIGDPNGSDVDAICHYIEQRHEVQANFRRLLTAKLRRLI 164
>tr|A7PE46|A7PE46_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016527001 PE=4 SV=1 Length = 300
Score = 118 bits (295), Expect = 2e-25 Identities = 71/174 (40%), Positives = 86/174 (49%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWTS EE ALR GV KHG GKW+ IQKDPEF L TRSN+DLKDKWRNM++ G Sbjct: 6 QKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLFTRSNIDLKDKWRNMSVSASGQGP 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLGPR 361 RE P V+ D S A D +S + + KS PR Sbjct: 66 REKSRTPKTKANTDAPSAATVSNPQNSSSAAPVTGDASADAMDD--ASKNILDGKS-APR 122
Query: 362 YTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSL 523 Y M+ +A+ L PNG + VP NFRRLL +L+ +V L Sbjct: 123 YNAMIFEALSALKEPNGSDTSTIVSFIEQRHEVPQNFRRLLSSRLRRLVAQDKL 176
>tr|A7QL84|A7QL84_VITVI Chromosome chr3 scaffold_117, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001485001 PE=4 SV=1 Length = 307
Score = 115 bits (287), Expect = 2e-24 Identities = 71/178 (39%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWT EEAAL+ GV KHG GKWR I KDPEF+ +L RSNVDLKDKWRNM++ G+ S Sbjct: 6 QKWTPEEEAALKAGVVKHGAGKWRTILKDPEFSGVLFLRSNVDLKDKWRNMSVMANGWGS 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKE---SKSL 352 RE E PL++ G V +DD AL +P + SK Sbjct: 66 REKARLALRKVPSAPKAE---ENPLSL--GTAVQSDDETVDTKALALPSNPVQITGSKRS 120
Query: 353 GPRYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSLL 526 R +++++AI +L P G P NF+RLL KLK +G L+ Sbjct: 121 FSRLDNLILEAITNLKEPGGSNKTTIATYIEDQYRAPPNFKRLLSAKLKFFTTNGKLI 178
>tr|Q8S270|Q8S270_ORYSJ Putative single myb histone 6 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0415C01.11 PE=4 SV=1 Length = 297
Score = 113 bits (282), Expect = 7e-24 Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 4/179 (2%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 Q+WT+ EEAAL+ GV KHG GKWR I +DPEFT LL RSNVDLKDKWRN+++ GGY S Sbjct: 6 QRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTAGGYGS 65
Query: 182 RE--XXXXXXXXXXXXXXDEPI--SPRPLAILPGEYVSADDSYGAADALVSSDSPKESKS 349 RE EP+ + I + A + + +P++ KS Sbjct: 66 RERARVALKGGKRGPKALAEPMDADEKNPDIDDNAIIDAQPLAVVVEPMQLESTPEKEKS 125
Query: 350 LGPRYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSLL 526 + R D++++AI L P+G P +F+RLL KLK +V G L+ Sbjct: 126 VA-RLDDLILEAIKKLKEPSGSNRTTISSYIEEQYWPPEDFQRLLSTKLKALVATGKLI 183
>tr|Q0JLM2|Q0JLM2_ORYSJ Os01g0589300 protein OS=Oryza sativa subsp. japonica GN=Os01g0589300 PE=4 SV=1 Length = 300
Score = 113 bits (282), Expect = 7e-24 Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 4/179 (2%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 Q+WT+ EEAAL+ GV KHG GKWR I +DPEFT LL RSNVDLKDKWRN+++ GGY S Sbjct: 6 QRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTAGGYGS 65
Query: 182 RE--XXXXXXXXXXXXXXDEPI--SPRPLAILPGEYVSADDSYGAADALVSSDSPKESKS 349 RE EP+ + I + A + + +P++ KS Sbjct: 66 RERARVALKGGKRGPKALAEPMDADEKNPDIDDNAIIDAQPLAVVVEPMQLESTPEKEKS 125
Query: 350 LGPRYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSLL 526 + R D++++AI L P+G P +F+RLL KLK +V G L+ Sbjct: 126 VA-RLDDLILEAIKKLKEPSGSNRTTISSYIEEQYWPPEDFQRLLSTKLKALVATGKLI 183
>tr|A2WRZ9|A2WRZ9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02637 PE=4 SV=1 Length = 318
Score = 113 bits (282), Expect = 7e-24 Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 4/179 (2%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 Q+WT+ EEAAL+ GV KHG GKWR I +DPEFT LL RSNVDLKDKWRN+++ GGY S Sbjct: 6 QRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTAGGYGS 65
Query: 182 RE--XXXXXXXXXXXXXXDEPI--SPRPLAILPGEYVSADDSYGAADALVSSDSPKESKS 349 RE EP+ + I + A + + +P++ KS Sbjct: 66 RERARVALKGGKRGPKALAEPMDADEKNPDIDDNAIIDAQPLAVVVEPMQLESTPEKEKS 125
Query: 350 LGPRYTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSLL 526 + R D++++AI L P+G P +F+RLL KLK +V G L+ Sbjct: 126 VA-RLDDLILEAIKKLKEPSGSNRTTISSYIEEQYWPPEDFQRLLSTKLKALVATGKLI 183
>tr|Q8W119|Q8W119_MAIZE Histone H1-like protein OS=Zea mays GN=hon108 PE=2 SV=1 Length = 288
Score = 112 bits (280), Expect = 1e-23 Identities = 66/174 (37%), Positives = 91/174 (52%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWTS EE ALR GV+KHG GKWR IQKDPEF+ +L++RSN+DLKDKWRN++ G S Sbjct: 6 QKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSASGLGS 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLGPR 361 + P S +LP +A+ A + P++ K+L P+ Sbjct: 66 SK----LRVPKITGPSSSPSSSSQPLLLP----AANKFTEATLPADAEKKPQDGKTL-PK 116
Query: 362 YTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSL 523 Y M+++A+L+LN PNG V FRR L KL+ + + Sbjct: 117 YGAMIMEALLELNEPNGSDIAAIFGFIEQRYAVQPTFRRFLASKLRRLADSNKI 170
>tr|Q6WLH2|Q6WLH2_MAIZE Single myb histone 4 OS=Zea mays GN=Smh4 PE=2 SV=1 Length = 288
Score = 112 bits (280), Expect = 1e-23 Identities = 66/174 (37%), Positives = 91/174 (52%) Frame = +2
Query: 2 QKWTSAEEAALRTGVKKHGLGKWRAIQKDPEFTFLLATRSNVDLKDKWRNMNIGVGGYIS 181 QKWTS EE ALR GV+KHG GKWR IQKDPEF+ +L++RSN+DLKDKWRN++ G S Sbjct: 6 QKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSASGLGS 65
Query: 182 REXXXXXXXXXXXXXXDEPISPRPLAILPGEYVSADDSYGAADALVSSDSPKESKSLGPR 361 + P S +LP +A+ A + P++ K+L P+ Sbjct: 66 SK----LRVPKITGPSSSPSSSSQPLLLP----AANKFTEATLPADAEKKPQDGKTL-PK 116
Query: 362 YTDMVIDAILDLNSPNGXXXXXXXXXXXXNNLVPANFRRLLRLKLKDMVKDGSL 523 Y M+++A+L+LN PNG V FRR L KL+ + + Sbjct: 117 YGAMIMEALLELNEPNGSDIAAIFGFIEQRYAVQPTFRRFLASKLRRLADSNKI 170
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