BP913194
Clone id YMU001_000027_E10
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCTTGATTCTGTGGCAGACGTCCGATGAGACCTTTGCCACTTCTCCTCTCTCACAGGAG
CTTCTTCGTCTGCATTCCATTGTTGCTGCCCACCAGACTTCACAATATAATGCTTAACCT
CTTTCTTGCTTTGAATAGACTCGGATGATTCGCTGTGCCCCATTGCACGAGGTTGTGATT
CATCGCCTTTTCCTGTTAAATCAATTCTATGAGCTGACTCGCTTCCAACATGATCAGAGG
AGGCTCGAATAGCTTGTGCTCCTGTCCGGTCAGCAATTCTCTGCCCACGGTGGCCGTGTG
CCGAATCACCAGTTGGTGGTGCTCTGCCCATGCTGTGCCCCATTGCTCGAGGTTGTGATT
CATCACCTTTTCCTGCTGAATCAGTTATCTGAGCTGGCTCGCTCCCACCATGACCAGAGG
CGGCTTGAATAGCTTGCGCTCCTGTCAAGTCGGCAGTCCTCTGCCCACGCTGGCCTCGGA
GTACCTGCAGGTAATAT
■■Homology search results ■■ -
sp_hit_id O15020
Definition sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapiens
Align length 105
Score (bit) 36.2
E-value 0.086
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913194|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E10.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapie... 36 0.086
sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3 35 0.25
sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis thal... 35 0.25
sp|Q5B3W7|ERFB_EMENI Palmitoyltransferase erf2 OS=Emericella nid... 33 0.73
sp|P54269|CAUP_DROME Homeobox protein caupolican OS=Drosophila m... 33 0.95
sp|Q9STT8|ATH3_ARATH Putative ABC2 homolog 3 OS=Arabidopsis thal... 32 1.2
sp|Q8DPS6|GLGB_STRR6 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6
sp|Q97QS8|GLGB_STRPN 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6
sp|Q04KG8|GLGB_STRP2 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6
sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Dr... 32 2.1
sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated 1-... 32 2.1
sp|P13941|CO3A1_RAT Collagen alpha-1(III) chain OS=Rattus norveg... 32 2.1
sp|P08121|CO3A1_MOUSE Collagen alpha-1(III) chain OS=Mus musculu... 32 2.1
sp|Q9WUL8|CITE4_MOUSE Cbp/p300-interacting transactivator 4 OS=M... 32 2.1
sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Dan... 31 2.8
sp|Q5D862|FILA2_HUMAN Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1 31 2.8
sp|Q554E7|ZDHC5_DICDI Putative ZDHHC-type palmitoyltransferase 5... 31 3.6
sp|Q3SIQ5|MUTL_THIDA DNA mismatch repair protein mutL OS=Thiobac... 31 3.6
sp|A3CM01|GLGB_STRSV 1,4-alpha-glucan-branching enzyme OS=Strept... 31 3.6
sp|A8AYH3|GLGB_STRGC 1,4-alpha-glucan-branching enzyme OS=Strept... 31 3.6
sp|P12977|EBNA3_EBV Epstein-Barr nuclear antigen 3 OS=Epstein-Ba... 31 3.6
sp|P34391|COL91_CAEEL Putative cuticle collagen 91 OS=Caenorhabd... 31 3.6
sp|Q96EB6|SIRT1_HUMAN NAD-dependent deacetylase sirtuin-1 OS=Hom... 30 4.7
sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN... 30 4.7
sp|P08672|CSP_PLACB Circumsporozoite protein OS=Plasmodium cynom... 30 4.7
sp|P03663|COATA_BPIKE Coat protein A OS=Enterobacteria phage IKe... 30 4.7
sp|P07856|SERI1_BOMMO Sericin 1 OS=Bombyx mori GN=ser1 PE=1 SV=2 30 6.1
sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus ... 30 6.1
sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus ... 30 6.1
sp|P27400|GAG_SFV3L Gag polyprotein OS=Simian foamy virus type 3... 30 6.1

>sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapiens
GN=SPTBN2 PE=1 SV=2
Length = 2390

Score = 36.2 bits (82), Expect = 0.086
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = -2

Query: 466 GQRTADLT--GAQAIQAASGHGGSEPAQITDSAGKGDESQP----RAMGHSM---GRAPP 314
GQ +D T G Q S S TD G+ SQP + + HS G P
Sbjct: 2115 GQTASDTTWDGTQPRPPPSTQAPSVNGVCTD----GEPSQPLLGQQRLEHSSFPEGPGPG 2170

Query: 313 TGDSAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDE 179
+GD A+G RG+R RT A A +ESAH L +G E
Sbjct: 2171 SGDEANGPRGER-QTRTRGPAPSAMPQSRSTESAHAATLPPRGPE 2214


>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
Length = 4061

Score = 34.7 bits (78), Expect = 0.25
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Frame = -2

Query: 475 GQRGQRTADLTGAQAI---QAAS-----GHGGSEPAQITDSAGKGDESQPRAMGHSMGRA 320
G R Q++AD + I QA+S GH GS +Q+T+S G ++S +++ + G+A
Sbjct: 1358 GSRHQQSADSSRHSGIGHRQASSAVRDSGHRGSSGSQVTNSEGHSEDSDTQSVS-AHGQA 1416

Query: 319 PP----TGDSAHGHRGQRIADRTGAQAIRASSDHVGSESAH 209
P +SA G G+ + R+ + + SS H SES H
Sbjct: 1417 GPHQQSHKESARGQSGES-SGRSRSFLYQVSS-HEQSESTH 1455



Score = 34.3 bits (77), Expect = 0.33
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = -2

Query: 418 SGHGGSEPAQITDSAGKGDESQPRAM-GHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRA 242
SGH GS +Q TDS G ++S +++ GH G H+ + DR+G ++ R+
Sbjct: 737 SGHRGSSGSQATDSEGHSEDSDTQSVSGHGQ-----AGHHQQSHQ-ESARDRSGERSRRS 790

Query: 241 S------SDHVGSESAH 209
S H SES+H
Sbjct: 791 GSFLYQVSTHKQSESSH 807



Score = 33.1 bits (74), Expect = 0.73
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Frame = -2

Query: 478 RGQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSA 299
R Q D ++ G GS Q+ D +G HS + D++
Sbjct: 2451 RHSTSQEGQDTIHGHPGSSSGGRQGSHYEQLVDRSGHSGSH------HSHTTSQGRSDAS 2504

Query: 298 HGHRGQRIADRTGAQAIRA--SSDHVGS---ESAHRIDLTGKGDESQPRAMG 158
HGH G R A R ++ S H GS E++ R D +G Q ++ G
Sbjct: 2505 HGHSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEG 2556


>sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis
thaliana GN=ATH4 PE=3 SV=1
Length = 664

Score = 34.7 bits (78), Expect = 0.25
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -3

Query: 321 HHQLVIRHTAT-VGRELLTGQEHKLFEPPLIMLEASQLIELI*QEKAMNHNLVQWGTANH 145
HH L++ T + E LTG+EH LF L L+ S L + + +E + NL + G A+
Sbjct: 418 HHSLIVCTIYTSLLWETLTGREHLLFYGRLKNLKGSDLDQAV-EESLKSVNLFRGGVADK 476

Query: 144 PS---LFKARKRLSIIL*SLVGS 85
P+ ++RLS+ + SL+GS
Sbjct: 477 PAGKYSGGMKRRLSVAI-SLIGS 498


>sp|Q5B3W7|ERFB_EMENI Palmitoyltransferase erf2 OS=Emericella
nidulans GN=erf2 PE=3 SV=2
Length = 601

Score = 33.1 bits (74), Expect = 0.73
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = -2

Query: 406 GSEPAQITDSAGKGDESQPRAMG------HSMG-RAPPTGDSAHGHRGQRIADRTGAQAI 248
G +++TD + GD+SQ M HS+ R PP S+ Q I +R G+ A
Sbjct: 32 GGISSRVTDMSEDGDQSQTNTMSSHVPHRHSVSRRGPPPARSSIASTSQ-ITNRPGSSAS 90

Query: 247 RASSDHVGSESA 212
R S H+ S +A
Sbjct: 91 RLSRTHIPSLAA 102


>sp|P54269|CAUP_DROME Homeobox protein caupolican OS=Drosophila
melanogaster GN=caup PE=1 SV=2
Length = 693

Score = 32.7 bits (73), Expect = 0.95
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = -2

Query: 475 GQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPP--TGDS 302
G G TA+ + SGHGG P T+ A A G + G P S
Sbjct: 8 GYAGYPTANQLTTANTDSQSGHGGGSPLSGTNEASLSPSGGSTATGLTAGPLSPGAVSQS 67

Query: 301 AHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKG 185
+H H G + + A+ + VG SA + DL +G
Sbjct: 68 SH-HAGHKGLSTSPAEDVVGGDVPVGLSSAAQ-DLPSRG 104


>sp|Q9STT8|ATH3_ARATH Putative ABC2 homolog 3 OS=Arabidopsis
thaliana GN=ATH3 PE=3 SV=1
Length = 895

Score = 32.3 bits (72), Expect = 1.2
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -3

Query: 279 ELLTGQEHKLFEPPLIMLEASQLIELI*QEKAMNHNLVQWGTANHPS---LFKARKRLSI 109
E LTG+EH LF L L+ S L + I +E + NL + G A+ P+ ++RLS+
Sbjct: 664 ETLTGREHLLFYGRLKNLKGSDLNQAI-EESLKSVNLSREGVADKPAGKYSGGMKRRLSV 722

Query: 108 IL*SLVGS 85
+ SL+GS
Sbjct: 723 AI-SLIGS 729


>sp|Q8DPS6|GLGB_STRR6 1,4-alpha-glucan-branching enzyme
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=glgB PE=3 SV=1
Length = 642

Score = 32.0 bits (71), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3

Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307
E+V N LE+WG W EH+Q V
Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592


>sp|Q97QS8|GLGB_STRPN 1,4-alpha-glucan-branching enzyme
OS=Streptococcus pneumoniae GN=glgB PE=3 SV=1
Length = 642

Score = 32.0 bits (71), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3

Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307
E+V N LE+WG W EH+Q V
Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592


>sp|Q04KG8|GLGB_STRP2 1,4-alpha-glucan-branching enzyme
OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=glgB PE=3 SV=1
Length = 642

Score = 32.0 bits (71), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3

Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307
E+V N LE+WG W EH+Q V
Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592


>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5
OS=Drosophila melanogaster GN=Spt5 PE=1 SV=1
Length = 1078

Score = 31.6 bits (70), Expect = 2.1
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -2

Query: 403 SEPAQITDSAGK----GDESQPRAMGHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRASS 236
SE + ++DS + ++SQ A S R S G RG R R+ +++ ++
Sbjct: 4 SEVSNMSDSGSEDGSISNKSQRSARSKSRSR------SRSGSRGSRSVSRSRSRS-QSGH 56

Query: 235 DHVGSESAHRIDLTGKGDES 176
GSES R D GK DES
Sbjct: 57 SRSGSESPQRRDNRGKSDES 76


tr_hit_id Q0S0W5
Definition tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase OS=Rhodococcus sp. (strain RHA1)
Align length 90
Score (bit) 40.4
E-value 0.047
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913194|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E10.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase OS=Rhod... 40 0.047
tr|Q5Z1N5|Q5Z1N5_NOCFA Putative uncharacterized protein OS=Nocar... 39 0.10
tr|B2GU93|B2GU93_XENTR Gon4l protein OS=Xenopus tropicalis GN=go... 38 0.23
tr|Q0B643|Q0B643_BURCM Putative uncharacterized protein OS=Burkh... 37 0.40
tr|A3QFP9|A3QFP9_SHELP Tetratricopeptide TPR_2 repeat protein OS... 37 0.40
tr|Q6A0Y5|Q6A0Y5_9EURY RNA polymerase B subunit (Fragment) OS=Ha... 37 0.40
tr|Q9LH97|Q9LH97_ARATH Arabidopsis thaliana genomic DNA, chromos... 37 0.68
tr|B4HXX7|B4HXX7_DROSE GM13847 OS=Drosophila sechellia GN=GM1384... 37 0.68
tr|Q681A9|Q681A9_ARATH Histone-H4-like protein OS=Arabidopsis th... 36 0.88
tr|Q7PRV7|Q7PRV7_ANOGA AGAP000467-PA (Fragment) OS=Anopheles gam... 36 0.88
tr|A4QPE4|A4QPE4_HUMAN SPTBN2 protein OS=Homo sapiens GN=SPTBN2 ... 36 0.88
tr|Q4PFC5|Q4PFC5_USTMA Putative uncharacterized protein OS=Ustil... 36 0.88
tr|Q9L0Z0|Q9L0Z0_STRCO Putative uncharacterized protein SCO1469 ... 35 1.5
tr|Q0FN60|Q0FN60_9RHOB NADH dehydrogenase subunit L OS=Roseovari... 35 1.5
tr|A3Z4K1|A3Z4K1_9SYNE Outer membrane autotransporter barrel OS=... 35 1.5
tr|Q7XMF7|Q7XMF7_ORYSJ OSJNBa0028I23.25 protein OS=Oryza sativa ... 35 1.5
tr|A9T1L2|A9T1L2_PHYPA Predicted protein (Fragment) OS=Physcomit... 35 1.5
tr|B6LBT2|B6LBT2_BRAFL Putative uncharacterized protein OS=Branc... 35 1.5
tr|B8PBT0|B8PBT0_9APHY Predicted protein OS=Postia placenta Mad-... 35 1.5
tr|Q0RQ42|Q0RQ42_FRAAA Putative ABC transporter, ATP-binding pro... 35 2.0
tr|A9NWI9|A9NWI9_PICSI Putative uncharacterized protein OS=Picea... 35 2.0
tr|B6KLK8|B6KLK8_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.0
tr|A5K1A3|A5K1A3_PLAVI AAA family ATPase, putative OS=Plasmodium... 35 2.0
tr|Q3JVU3|Q3JVU3_BURP1 Putative uncharacterized protein OS=Burkh... 35 2.6
tr|B1VL70|B1VL70_STRGG Putative uncharacterized protein OS=Strep... 35 2.6
tr|A9GF66|A9GF66_SORC5 Putative uncharacterized protein OS=Soran... 35 2.6
tr|A5EHR6|A5EHR6_BRASB Putative uncharacterized protein OS=Brady... 35 2.6
tr|B2KWI5|B2KWI5_ECTSI Transposase OS=Ectocarpus siliculosus GN=... 35 2.6
tr|A8JBS4|A8JBS4_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 2.6
tr|B6NY68|B6NY68_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6

>tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase
OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro07055 PE=4
SV=1
Length = 367

Score = 40.4 bits (93), Expect = 0.047
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = -2

Query: 469 RGQRTADLTGAQAIQAASGHGG-SEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSAHG 293
R R + TG+ + G G PA+ +G E R GH GR P G A
Sbjct: 12 RAPRQRERTGSDPVDDRDGQGVVRRPAR----TARGIECPHRHPGHRAGRTSPLGAGAGE 67

Query: 292 HRGQ-RIADRTGAQAIRASSDHVGSESAHR 206
HR + R+ R G R SD +++AHR
Sbjct: 68 HRNRSRVRSRRGHGRDRGVSDAAAADTAHR 97


>tr|Q5Z1N5|Q5Z1N5_NOCFA Putative uncharacterized protein OS=Nocardia
farcinica GN=NFA_8110 PE=4 SV=1
Length = 7192

Score = 39.3 bits (90), Expect = 0.10
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -2

Query: 445 TGAQAIQAASGHGGSEPAQITDSAG--KGDESQPRAMGHSMGRAP--PTGDSAHGHRGQR 278
TGA A S + PA I G +GD + PR GH AP PTG SA G R
Sbjct: 570 TGADAAAPRSDAEEASPAAIQSDTGAPRGDTAAPRDAGHPSTSAPEGPTGGSADGTAAPR 629

Query: 277 IADRT 263
+ D T
Sbjct: 630 VLDGT 634


>tr|B2GU93|B2GU93_XENTR Gon4l protein OS=Xenopus tropicalis GN=gon4l
PE=2 SV=1
Length = 1391

Score = 38.1 bits (87), Expect = 0.23
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -2

Query: 442 GAQAIQAASG----HGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSAHGHRGQRI 275
GAQ ++ SG GG P ++ GDE Q A+GH+ G P+G SA GQR
Sbjct: 553 GAQTCESGSGLCEQQGGQGPREL------GDEGQ--AVGHASGTQEPSGSSA----GQRH 600

Query: 274 ADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQ 173
D T + + +H S L + DE +
Sbjct: 601 RDHTLGKEGKTKENHGNRSSPSPAGLGAEPDEKE 634


>tr|Q0B643|Q0B643_BURCM Putative uncharacterized protein
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=Bamb_4831 PE=4 SV=1
Length = 504

Score = 37.4 bits (85), Expect = 0.40
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = -2

Query: 469 RGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGR-APPTGDSAHG 293
R +RT DL G ++ A+ P D A ++ A G GR A G +AHG
Sbjct: 50 RDERTLDLFGDPVLEPAA----RAPVVARDDAMADGDTDAAAAGEDAGRQAMLDGFAAHG 105

Query: 292 HRGQRIADRTGAQAIRASSD--HVGSESAHRIDLTGKGD 182
H AD G A+ ++D G+ +A R G GD
Sbjct: 106 HAADADADGDGVDAVEQAADVAMTGASAATR----GNGD 140


>tr|A3QFP9|A3QFP9_SHELP Tetratricopeptide TPR_2 repeat protein
OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4)
GN=Shew_2431 PE=4 SV=1
Length = 693

Score = 37.4 bits (85), Expect = 0.40
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = -2

Query: 490 LQVLRGQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPT 311
L++ + Q+ A Q+ Q S S+ Q + K D+SQ G + G+
Sbjct: 438 LELAEQLKQQQQASQDQGQSDQKKSEQNQSDQDQSNQDSNKQDKSQQDGAGQNQGQQQGQ 497

Query: 310 GD--SAHGHRGQRIADRTGAQAIRASSDHVGSE 218
GD S G RGQ+ + G Q S+ GS+
Sbjct: 498 GDQQSGQGSRGQQSQGQNGQQEDEQGSNQQGSD 530


>tr|Q6A0Y5|Q6A0Y5_9EURY RNA polymerase B subunit (Fragment)
OS=Haloterrigena turkmenica GN=rpoB PE=4 SV=1
Length = 229

Score = 37.4 bits (85), Expect = 0.40
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = -2

Query: 484 VLRGQRGQ-RTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTG 308
VLRG R + R DL + A HG + A+ AG G + GRAP G
Sbjct: 106 VLRGHRREDRGRDLRRRDFLPEALPHGLEQAARPLARAGAGADPPADGGARPRGRAPYRG 165

Query: 307 DS---AHGHRGQRIADRTGAQAIR 245
D H RG+ A+RT A+ +R
Sbjct: 166 DGTRRVHRPRGRDDAERTTARRVR 189


>tr|Q9LH97|Q9LH97_ARATH Arabidopsis thaliana genomic DNA, chromosome
3, BAC clone: T19N8 OS=Arabidopsis thaliana GN=At3g28780
PE=4 SV=1
Length = 614

Score = 36.6 bits (83), Expect = 0.68
Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 6/161 (3%)
Frame = -2

Query: 466 GQRTADLTGAQAIQAASGHGGSEPAQ------ITDSAGKGDESQPRAMGHSMGRAPPTGD 305
G + TG+++ A + GGS A + AG G ++ +MG A +
Sbjct: 445 GVASGGSTGSESASAGAASGGSTEANGGAAAGGSTEAGSGTSTETSSMGGGSAAAGGVSE 504

Query: 304 SAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQPRAMGHXXXXXXXXXX 125
S+ G G A T A S+ G+ D TG P A G
Sbjct: 505 SSSG--GSTAAGGTSESASGGSATAGGASGGTYTDSTGGSPTGSPSAGGPSGSASESSME 562

Query: 124 XXXKHYIVKSGGQQQWNADEEAPVREEKWQRSHRTSATESS 2
GGQ A + +Q++H SA +SS
Sbjct: 563 GGTF------GGQSMGGQAGSASYQSTNYQKTHSKSAGKSS 597


>tr|B4HXX7|B4HXX7_DROSE GM13847 OS=Drosophila sechellia GN=GM13847
PE=4 SV=1
Length = 2538

Score = 36.6 bits (83), Expect = 0.68
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = -2

Query: 397 PAQITDSAGKGDES---QPRAMGHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRASSDHV 227
PA +AG+ E P GHS PPT S R Q RTG + A+ +H+
Sbjct: 243 PATAVGAAGEDQEQGQRHPGPHGHSAAAVPPTEGSPGSERQQ----RTGGRRPAAADEHL 298

Query: 226 GSESAHR-IDLTGKGDE 179
G +S + TG+G E
Sbjct: 299 GVQSQLKSTSTTGRGPE 315


>tr|Q681A9|Q681A9_ARATH Histone-H4-like protein OS=Arabidopsis
thaliana GN=At3g28780 PE=2 SV=1
Length = 674

Score = 36.2 bits (82), Expect = 0.88
Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 6/161 (3%)
Frame = -2

Query: 466 GQRTADLTGAQAIQAASGHGGSEPAQ------ITDSAGKGDESQPRAMGHSMGRAPPTGD 305
G + TG+++ A + GGS A + AG G ++ +MG A +
Sbjct: 505 GVASGGSTGSESASAGAASGGSTEASGGAAAGGSAEAGSGTSTETSSMGGGSAAAGGVSE 564

Query: 304 SAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQPRAMGHXXXXXXXXXX 125
S+ G G A T A S+ G+ D TG P A G
Sbjct: 565 SSSG--GSTAAGGTSESASGGSATAGGASGGTYTDSTGGSPTGSPSAGGPSGSASESSME 622

Query: 124 XXXKHYIVKSGGQQQWNADEEAPVREEKWQRSHRTSATESS 2
GGQ A + +Q++H SA +SS
Sbjct: 623 GGTF------GGQSMGGQAGSASYQSTNYQKTHSKSAGKSS 657


>tr|Q7PRV7|Q7PRV7_ANOGA AGAP000467-PA (Fragment) OS=Anopheles
gambiae GN=AGAP000467 PE=4 SV=4
Length = 1233

Score = 36.2 bits (82), Expect = 0.88
Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Frame = -2

Query: 454 ADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHS-MGRA--PPTGDSAHGHRG 284
A L AQ +GH G +P + G P A G + G A P GD+ G
Sbjct: 266 AVLIAAQKATDRTGHEG-QPGASARALRPGPSRAPLARGRNPTGHAGRPVRGDAQRGPAH 324

Query: 283 QRIADRT----GAQAIRASSDHVGSESAHRIDLTGKGDES-QPRAMGH 155
R ADRT GA+ R H G+ SA + +G + Q GH
Sbjct: 325 VRPADRTDRSRGAEGARGRRLHAGARSARHVQADDRGKHTDQGGVAGH 372