BP913194 |
Clone id |
YMU001_000027_E10 |
Library |
YMU01 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000027_E10. |
Accession |
BP913194 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGCTTGATTCTGTGGCAGACGTCCGATGAGACCTTTGCCACTTCTCCTCTCTCACAGGAG CTTCTTCGTCTGCATTCCATTGTTGCTGCCCACCAGACTTCACAATATAATGCTTAACCT CTTTCTTGCTTTGAATAGACTCGGATGATTCGCTGTGCCCCATTGCACGAGGTTGTGATT CATCGCCTTTTCCTGTTAAATCAATTCTATGAGCTGACTCGCTTCCAACATGATCAGAGG AGGCTCGAATAGCTTGTGCTCCTGTCCGGTCAGCAATTCTCTGCCCACGGTGGCCGTGTG CCGAATCACCAGTTGGTGGTGCTCTGCCCATGCTGTGCCCCATTGCTCGAGGTTGTGATT CATCACCTTTTCCTGCTGAATCAGTTATCTGAGCTGGCTCGCTCCCACCATGACCAGAGG CGGCTTGAATAGCTTGCGCTCCTGTCAAGTCGGCAGTCCTCTGCCCACGCTGGCCTCGGA GTACCTGCAGGTAATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O15020 |
Definition |
sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapiens |
Align length |
105 |
Score (bit) |
36.2 |
E-value |
0.086 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913194|Adiantum capillus-veneris mRNA, clone: YMU001_000027_E10. (497 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapie... 36 0.086 sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3 35 0.25 sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis thal... 35 0.25 sp|Q5B3W7|ERFB_EMENI Palmitoyltransferase erf2 OS=Emericella nid... 33 0.73 sp|P54269|CAUP_DROME Homeobox protein caupolican OS=Drosophila m... 33 0.95 sp|Q9STT8|ATH3_ARATH Putative ABC2 homolog 3 OS=Arabidopsis thal... 32 1.2 sp|Q8DPS6|GLGB_STRR6 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6 sp|Q97QS8|GLGB_STRPN 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6 sp|Q04KG8|GLGB_STRP2 1,4-alpha-glucan-branching enzyme OS=Strept... 32 1.6 sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Dr... 32 2.1 sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated 1-... 32 2.1 sp|P13941|CO3A1_RAT Collagen alpha-1(III) chain OS=Rattus norveg... 32 2.1 sp|P08121|CO3A1_MOUSE Collagen alpha-1(III) chain OS=Mus musculu... 32 2.1 sp|Q9WUL8|CITE4_MOUSE Cbp/p300-interacting transactivator 4 OS=M... 32 2.1 sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Dan... 31 2.8 sp|Q5D862|FILA2_HUMAN Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1 31 2.8 sp|Q554E7|ZDHC5_DICDI Putative ZDHHC-type palmitoyltransferase 5... 31 3.6 sp|Q3SIQ5|MUTL_THIDA DNA mismatch repair protein mutL OS=Thiobac... 31 3.6 sp|A3CM01|GLGB_STRSV 1,4-alpha-glucan-branching enzyme OS=Strept... 31 3.6 sp|A8AYH3|GLGB_STRGC 1,4-alpha-glucan-branching enzyme OS=Strept... 31 3.6 sp|P12977|EBNA3_EBV Epstein-Barr nuclear antigen 3 OS=Epstein-Ba... 31 3.6 sp|P34391|COL91_CAEEL Putative cuticle collagen 91 OS=Caenorhabd... 31 3.6 sp|Q96EB6|SIRT1_HUMAN NAD-dependent deacetylase sirtuin-1 OS=Hom... 30 4.7 sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN... 30 4.7 sp|P08672|CSP_PLACB Circumsporozoite protein OS=Plasmodium cynom... 30 4.7 sp|P03663|COATA_BPIKE Coat protein A OS=Enterobacteria phage IKe... 30 4.7 sp|P07856|SERI1_BOMMO Sericin 1 OS=Bombyx mori GN=ser1 PE=1 SV=2 30 6.1 sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus ... 30 6.1 sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus ... 30 6.1 sp|P27400|GAG_SFV3L Gag polyprotein OS=Simian foamy virus type 3... 30 6.1
>sp|O15020|SPTN2_HUMAN Spectrin beta chain, brain 2 OS=Homo sapiens GN=SPTBN2 PE=1 SV=2 Length = 2390
Score = 36.2 bits (82), Expect = 0.086 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 9/105 (8%) Frame = -2
Query: 466 GQRTADLT--GAQAIQAASGHGGSEPAQITDSAGKGDESQP----RAMGHSM---GRAPP 314 GQ +D T G Q S S TD G+ SQP + + HS G P Sbjct: 2115 GQTASDTTWDGTQPRPPPSTQAPSVNGVCTD----GEPSQPLLGQQRLEHSSFPEGPGPG 2170
Query: 313 TGDSAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDE 179 +GD A+G RG+R RT A A +ESAH L +G E Sbjct: 2171 SGDEANGPRGER-QTRTRGPAPSAMPQSRSTESAHAATLPPRGPE 2214
>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3 Length = 4061
Score = 34.7 bits (78), Expect = 0.25 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 12/101 (11%) Frame = -2
Query: 475 GQRGQRTADLTGAQAI---QAAS-----GHGGSEPAQITDSAGKGDESQPRAMGHSMGRA 320 G R Q++AD + I QA+S GH GS +Q+T+S G ++S +++ + G+A Sbjct: 1358 GSRHQQSADSSRHSGIGHRQASSAVRDSGHRGSSGSQVTNSEGHSEDSDTQSVS-AHGQA 1416
Query: 319 PP----TGDSAHGHRGQRIADRTGAQAIRASSDHVGSESAH 209 P +SA G G+ + R+ + + SS H SES H Sbjct: 1417 GPHQQSHKESARGQSGES-SGRSRSFLYQVSS-HEQSESTH 1455
Score = 34.3 bits (77), Expect = 0.33 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = -2
Query: 418 SGHGGSEPAQITDSAGKGDESQPRAM-GHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRA 242 SGH GS +Q TDS G ++S +++ GH G H+ + DR+G ++ R+ Sbjct: 737 SGHRGSSGSQATDSEGHSEDSDTQSVSGHGQ-----AGHHQQSHQ-ESARDRSGERSRRS 790
Query: 241 S------SDHVGSESAH 209 S H SES+H Sbjct: 791 GSFLYQVSTHKQSESSH 807
Score = 33.1 bits (74), Expect = 0.73 Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%) Frame = -2
Query: 478 RGQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSA 299 R Q D ++ G GS Q+ D +G HS + D++ Sbjct: 2451 RHSTSQEGQDTIHGHPGSSSGGRQGSHYEQLVDRSGHSGSH------HSHTTSQGRSDAS 2504
Query: 298 HGHRGQRIADRTGAQAIRA--SSDHVGS---ESAHRIDLTGKGDESQPRAMG 158 HGH G R A R ++ S H GS E++ R D +G Q ++ G Sbjct: 2505 HGHSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEG 2556
>sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis thaliana GN=ATH4 PE=3 SV=1 Length = 664
Score = 34.7 bits (78), Expect = 0.25 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 4/83 (4%) Frame = -3
Query: 321 HHQLVIRHTAT-VGRELLTGQEHKLFEPPLIMLEASQLIELI*QEKAMNHNLVQWGTANH 145 HH L++ T + E LTG+EH LF L L+ S L + + +E + NL + G A+ Sbjct: 418 HHSLIVCTIYTSLLWETLTGREHLLFYGRLKNLKGSDLDQAV-EESLKSVNLFRGGVADK 476
Query: 144 PS---LFKARKRLSIIL*SLVGS 85 P+ ++RLS+ + SL+GS Sbjct: 477 PAGKYSGGMKRRLSVAI-SLIGS 498
>sp|Q5B3W7|ERFB_EMENI Palmitoyltransferase erf2 OS=Emericella nidulans GN=erf2 PE=3 SV=2 Length = 601
Score = 33.1 bits (74), Expect = 0.73 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 406 GSEPAQITDSAGKGDESQPRAMG------HSMG-RAPPTGDSAHGHRGQRIADRTGAQAI 248 G +++TD + GD+SQ M HS+ R PP S+ Q I +R G+ A Sbjct: 32 GGISSRVTDMSEDGDQSQTNTMSSHVPHRHSVSRRGPPPARSSIASTSQ-ITNRPGSSAS 90
Query: 247 RASSDHVGSESA 212 R S H+ S +A Sbjct: 91 RLSRTHIPSLAA 102
>sp|P54269|CAUP_DROME Homeobox protein caupolican OS=Drosophila melanogaster GN=caup PE=1 SV=2 Length = 693
Score = 32.7 bits (73), Expect = 0.95 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Frame = -2
Query: 475 GQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPP--TGDS 302 G G TA+ + SGHGG P T+ A A G + G P S Sbjct: 8 GYAGYPTANQLTTANTDSQSGHGGGSPLSGTNEASLSPSGGSTATGLTAGPLSPGAVSQS 67
Query: 301 AHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKG 185 +H H G + + A+ + VG SA + DL +G Sbjct: 68 SH-HAGHKGLSTSPAEDVVGGDVPVGLSSAAQ-DLPSRG 104
>sp|Q9STT8|ATH3_ARATH Putative ABC2 homolog 3 OS=Arabidopsis thaliana GN=ATH3 PE=3 SV=1 Length = 895
Score = 32.3 bits (72), Expect = 1.2 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Frame = -3
Query: 279 ELLTGQEHKLFEPPLIMLEASQLIELI*QEKAMNHNLVQWGTANHPS---LFKARKRLSI 109 E LTG+EH LF L L+ S L + I +E + NL + G A+ P+ ++RLS+ Sbjct: 664 ETLTGREHLLFYGRLKNLKGSDLNQAI-EESLKSVNLSREGVADKPAGKYSGGMKRRLSV 722
Query: 108 IL*SLVGS 85 + SL+GS Sbjct: 723 AI-SLIGS 729
>sp|Q8DPS6|GLGB_STRR6 1,4-alpha-glucan-branching enzyme OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgB PE=3 SV=1 Length = 642
Score = 32.0 bits (71), Expect = 1.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3
Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307 E+V N LE+WG W EH+Q V Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592
>sp|Q97QS8|GLGB_STRPN 1,4-alpha-glucan-branching enzyme OS=Streptococcus pneumoniae GN=glgB PE=3 SV=1 Length = 642
Score = 32.0 bits (71), Expect = 1.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3
Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307 E+V N LE+WG W EH+Q V Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592
>sp|Q04KG8|GLGB_STRP2 1,4-alpha-glucan-branching enzyme OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=glgB PE=3 SV=1 Length = 642
Score = 32.0 bits (71), Expect = 1.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3
Query: 372 EKVMNHNLEQWGTAWAEHHQLV 307 E+V N LE+WG W EH+Q V Sbjct: 571 EEVWNTELEEWGGVWKEHNQTV 592
>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Drosophila melanogaster GN=Spt5 PE=1 SV=1 Length = 1078
Score = 31.6 bits (70), Expect = 2.1 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -2
Query: 403 SEPAQITDSAGK----GDESQPRAMGHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRASS 236 SE + ++DS + ++SQ A S R S G RG R R+ +++ ++ Sbjct: 4 SEVSNMSDSGSEDGSISNKSQRSARSKSRSR------SRSGSRGSRSVSRSRSRS-QSGH 56
Query: 235 DHVGSESAHRIDLTGKGDES 176 GSES R D GK DES Sbjct: 57 SRSGSESPQRRDNRGKSDES 76
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0S0W5 |
Definition |
tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase OS=Rhodococcus sp. (strain RHA1) |
Align length |
90 |
Score (bit) |
40.4 |
E-value |
0.047 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913194|Adiantum capillus-veneris mRNA, clone: YMU001_000027_E10. (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase OS=Rhod... 40 0.047 tr|Q5Z1N5|Q5Z1N5_NOCFA Putative uncharacterized protein OS=Nocar... 39 0.10 tr|B2GU93|B2GU93_XENTR Gon4l protein OS=Xenopus tropicalis GN=go... 38 0.23 tr|Q0B643|Q0B643_BURCM Putative uncharacterized protein OS=Burkh... 37 0.40 tr|A3QFP9|A3QFP9_SHELP Tetratricopeptide TPR_2 repeat protein OS... 37 0.40 tr|Q6A0Y5|Q6A0Y5_9EURY RNA polymerase B subunit (Fragment) OS=Ha... 37 0.40 tr|Q9LH97|Q9LH97_ARATH Arabidopsis thaliana genomic DNA, chromos... 37 0.68 tr|B4HXX7|B4HXX7_DROSE GM13847 OS=Drosophila sechellia GN=GM1384... 37 0.68 tr|Q681A9|Q681A9_ARATH Histone-H4-like protein OS=Arabidopsis th... 36 0.88 tr|Q7PRV7|Q7PRV7_ANOGA AGAP000467-PA (Fragment) OS=Anopheles gam... 36 0.88 tr|A4QPE4|A4QPE4_HUMAN SPTBN2 protein OS=Homo sapiens GN=SPTBN2 ... 36 0.88 tr|Q4PFC5|Q4PFC5_USTMA Putative uncharacterized protein OS=Ustil... 36 0.88 tr|Q9L0Z0|Q9L0Z0_STRCO Putative uncharacterized protein SCO1469 ... 35 1.5 tr|Q0FN60|Q0FN60_9RHOB NADH dehydrogenase subunit L OS=Roseovari... 35 1.5 tr|A3Z4K1|A3Z4K1_9SYNE Outer membrane autotransporter barrel OS=... 35 1.5 tr|Q7XMF7|Q7XMF7_ORYSJ OSJNBa0028I23.25 protein OS=Oryza sativa ... 35 1.5 tr|A9T1L2|A9T1L2_PHYPA Predicted protein (Fragment) OS=Physcomit... 35 1.5 tr|B6LBT2|B6LBT2_BRAFL Putative uncharacterized protein OS=Branc... 35 1.5 tr|B8PBT0|B8PBT0_9APHY Predicted protein OS=Postia placenta Mad-... 35 1.5 tr|Q0RQ42|Q0RQ42_FRAAA Putative ABC transporter, ATP-binding pro... 35 2.0 tr|A9NWI9|A9NWI9_PICSI Putative uncharacterized protein OS=Picea... 35 2.0 tr|B6KLK8|B6KLK8_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.0 tr|A5K1A3|A5K1A3_PLAVI AAA family ATPase, putative OS=Plasmodium... 35 2.0 tr|Q3JVU3|Q3JVU3_BURP1 Putative uncharacterized protein OS=Burkh... 35 2.6 tr|B1VL70|B1VL70_STRGG Putative uncharacterized protein OS=Strep... 35 2.6 tr|A9GF66|A9GF66_SORC5 Putative uncharacterized protein OS=Soran... 35 2.6 tr|A5EHR6|A5EHR6_BRASB Putative uncharacterized protein OS=Brady... 35 2.6 tr|B2KWI5|B2KWI5_ECTSI Transposase OS=Ectocarpus siliculosus GN=... 35 2.6 tr|A8JBS4|A8JBS4_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 2.6 tr|B6NY68|B6NY68_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6
>tr|Q0S0W5|Q0S0W5_RHOSR Possible sensory histidine kinase OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro07055 PE=4 SV=1 Length = 367
Score = 40.4 bits (93), Expect = 0.047 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Frame = -2
Query: 469 RGQRTADLTGAQAIQAASGHGG-SEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSAHG 293 R R + TG+ + G G PA+ +G E R GH GR P G A Sbjct: 12 RAPRQRERTGSDPVDDRDGQGVVRRPAR----TARGIECPHRHPGHRAGRTSPLGAGAGE 67
Query: 292 HRGQ-RIADRTGAQAIRASSDHVGSESAHR 206 HR + R+ R G R SD +++AHR Sbjct: 68 HRNRSRVRSRRGHGRDRGVSDAAAADTAHR 97
>tr|Q5Z1N5|Q5Z1N5_NOCFA Putative uncharacterized protein OS=Nocardia farcinica GN=NFA_8110 PE=4 SV=1 Length = 7192
Score = 39.3 bits (90), Expect = 0.10 Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -2
Query: 445 TGAQAIQAASGHGGSEPAQITDSAG--KGDESQPRAMGHSMGRAP--PTGDSAHGHRGQR 278 TGA A S + PA I G +GD + PR GH AP PTG SA G R Sbjct: 570 TGADAAAPRSDAEEASPAAIQSDTGAPRGDTAAPRDAGHPSTSAPEGPTGGSADGTAAPR 629
Query: 277 IADRT 263 + D T Sbjct: 630 VLDGT 634
>tr|B2GU93|B2GU93_XENTR Gon4l protein OS=Xenopus tropicalis GN=gon4l PE=2 SV=1 Length = 1391
Score = 38.1 bits (87), Expect = 0.23 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Frame = -2
Query: 442 GAQAIQAASG----HGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTGDSAHGHRGQRI 275 GAQ ++ SG GG P ++ GDE Q A+GH+ G P+G SA GQR Sbjct: 553 GAQTCESGSGLCEQQGGQGPREL------GDEGQ--AVGHASGTQEPSGSSA----GQRH 600
Query: 274 ADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQ 173 D T + + +H S L + DE + Sbjct: 601 RDHTLGKEGKTKENHGNRSSPSPAGLGAEPDEKE 634
>tr|Q0B643|Q0B643_BURCM Putative uncharacterized protein OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_4831 PE=4 SV=1 Length = 504
Score = 37.4 bits (85), Expect = 0.40 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Frame = -2
Query: 469 RGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGR-APPTGDSAHG 293 R +RT DL G ++ A+ P D A ++ A G GR A G +AHG Sbjct: 50 RDERTLDLFGDPVLEPAA----RAPVVARDDAMADGDTDAAAAGEDAGRQAMLDGFAAHG 105
Query: 292 HRGQRIADRTGAQAIRASSD--HVGSESAHRIDLTGKGD 182 H AD G A+ ++D G+ +A R G GD Sbjct: 106 HAADADADGDGVDAVEQAADVAMTGASAATR----GNGD 140
>tr|A3QFP9|A3QFP9_SHELP Tetratricopeptide TPR_2 repeat protein OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=Shew_2431 PE=4 SV=1 Length = 693
Score = 37.4 bits (85), Expect = 0.40 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Frame = -2
Query: 490 LQVLRGQRGQRTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPT 311 L++ + Q+ A Q+ Q S S+ Q + K D+SQ G + G+ Sbjct: 438 LELAEQLKQQQQASQDQGQSDQKKSEQNQSDQDQSNQDSNKQDKSQQDGAGQNQGQQQGQ 497
Query: 310 GD--SAHGHRGQRIADRTGAQAIRASSDHVGSE 218 GD S G RGQ+ + G Q S+ GS+ Sbjct: 498 GDQQSGQGSRGQQSQGQNGQQEDEQGSNQQGSD 530
>tr|Q6A0Y5|Q6A0Y5_9EURY RNA polymerase B subunit (Fragment) OS=Haloterrigena turkmenica GN=rpoB PE=4 SV=1 Length = 229
Score = 37.4 bits (85), Expect = 0.40 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Frame = -2
Query: 484 VLRGQRGQ-RTADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHSMGRAPPTG 308 VLRG R + R DL + A HG + A+ AG G + GRAP G Sbjct: 106 VLRGHRREDRGRDLRRRDFLPEALPHGLEQAARPLARAGAGADPPADGGARPRGRAPYRG 165
Query: 307 DS---AHGHRGQRIADRTGAQAIR 245 D H RG+ A+RT A+ +R Sbjct: 166 DGTRRVHRPRGRDDAERTTARRVR 189
>tr|Q9LH97|Q9LH97_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T19N8 OS=Arabidopsis thaliana GN=At3g28780 PE=4 SV=1 Length = 614
Score = 36.6 bits (83), Expect = 0.68 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 6/161 (3%) Frame = -2
Query: 466 GQRTADLTGAQAIQAASGHGGSEPAQ------ITDSAGKGDESQPRAMGHSMGRAPPTGD 305 G + TG+++ A + GGS A + AG G ++ +MG A + Sbjct: 445 GVASGGSTGSESASAGAASGGSTEANGGAAAGGSTEAGSGTSTETSSMGGGSAAAGGVSE 504
Query: 304 SAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQPRAMGHXXXXXXXXXX 125 S+ G G A T A S+ G+ D TG P A G Sbjct: 505 SSSG--GSTAAGGTSESASGGSATAGGASGGTYTDSTGGSPTGSPSAGGPSGSASESSME 562
Query: 124 XXXKHYIVKSGGQQQWNADEEAPVREEKWQRSHRTSATESS 2 GGQ A + +Q++H SA +SS Sbjct: 563 GGTF------GGQSMGGQAGSASYQSTNYQKTHSKSAGKSS 597
>tr|B4HXX7|B4HXX7_DROSE GM13847 OS=Drosophila sechellia GN=GM13847 PE=4 SV=1 Length = 2538
Score = 36.6 bits (83), Expect = 0.68 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Frame = -2
Query: 397 PAQITDSAGKGDES---QPRAMGHSMGRAPPTGDSAHGHRGQRIADRTGAQAIRASSDHV 227 PA +AG+ E P GHS PPT S R Q RTG + A+ +H+ Sbjct: 243 PATAVGAAGEDQEQGQRHPGPHGHSAAAVPPTEGSPGSERQQ----RTGGRRPAAADEHL 298
Query: 226 GSESAHR-IDLTGKGDE 179 G +S + TG+G E Sbjct: 299 GVQSQLKSTSTTGRGPE 315
>tr|Q681A9|Q681A9_ARATH Histone-H4-like protein OS=Arabidopsis thaliana GN=At3g28780 PE=2 SV=1 Length = 674
Score = 36.2 bits (82), Expect = 0.88 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 6/161 (3%) Frame = -2
Query: 466 GQRTADLTGAQAIQAASGHGGSEPAQ------ITDSAGKGDESQPRAMGHSMGRAPPTGD 305 G + TG+++ A + GGS A + AG G ++ +MG A + Sbjct: 505 GVASGGSTGSESASAGAASGGSTEASGGAAAGGSAEAGSGTSTETSSMGGGSAAAGGVSE 564
Query: 304 SAHGHRGQRIADRTGAQAIRASSDHVGSESAHRIDLTGKGDESQPRAMGHXXXXXXXXXX 125 S+ G G A T A S+ G+ D TG P A G Sbjct: 565 SSSG--GSTAAGGTSESASGGSATAGGASGGTYTDSTGGSPTGSPSAGGPSGSASESSME 622
Query: 124 XXXKHYIVKSGGQQQWNADEEAPVREEKWQRSHRTSATESS 2 GGQ A + +Q++H SA +SS Sbjct: 623 GGTF------GGQSMGGQAGSASYQSTNYQKTHSKSAGKSS 657
>tr|Q7PRV7|Q7PRV7_ANOGA AGAP000467-PA (Fragment) OS=Anopheles gambiae GN=AGAP000467 PE=4 SV=4 Length = 1233
Score = 36.2 bits (82), Expect = 0.88 Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Frame = -2
Query: 454 ADLTGAQAIQAASGHGGSEPAQITDSAGKGDESQPRAMGHS-MGRA--PPTGDSAHGHRG 284 A L AQ +GH G +P + G P A G + G A P GD+ G Sbjct: 266 AVLIAAQKATDRTGHEG-QPGASARALRPGPSRAPLARGRNPTGHAGRPVRGDAQRGPAH 324
Query: 283 QRIADRT----GAQAIRASSDHVGSESAHRIDLTGKGDES-QPRAMGH 155 R ADRT GA+ R H G+ SA + +G + Q GH Sbjct: 325 VRPADRTDRSRGAEGARGRRLHAGARSARHVQADDRGKHTDQGGVAGH 372
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