BP913076
Clone id YMU001_000026_C03
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTACGCAGAATGTGCTGGTAGAGCACCAGAACTTACCTGTGTCTCAGCCACGGGATGA
GGTGGAAAAGTTGGCGGAAATTTCATCTTTGAGTGAGCAGCACATAGCGGGCTCTGAGAC
ATTAAAGAGTTCAGCTAATGGGGGGCTACCTTCAAAGAAAGATGCTGACTCCACTGTTTT
GACTCCGAGGAAAGGAGAGAGTGGAAAGTCTAAACAGTTCAAAGGTTCCAGTTCCAGTCA
TGGAAAAATATCTGATGGCTCAAAAGTTAGCACGGACTTGAAATCAAAGCTCAAAGCAAA
AATCTTGGATGCAAATCAGGACAAGTCTGGGCTTGATAATATTGCGAAACATCAAGAGCA
TGTTGCCAAACAGACTGCCTTAAGTCAATCAAGGGGATCAGGGATTTCTAGGACGCCTTC
TGAGTTGAAATCAGGCTTTAAGGACTTGATCAGGTCTAATAGTTCCAGTGAAAGGAGCCG
CTTGGAGATTTTGGGAGCATTCAGAACTCAAGAAGAGTCAAACACTAATAAAGTGAGAGC
AGCGTAAGTGCTACTTTGA
■■Homology search results ■■ -
sp_hit_id P44991
Definition sp|P44991|LYXK_HAEIN Probable L-xylulose kinase OS=Haemophilus influenzae
Align length 44
Score (bit) 30.0
E-value 8.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913076|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_C03.
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P44991|LYXK_HAEIN Probable L-xylulose kinase OS=Haemophilus i... 30 8.1
sp|P51125|ICAL_MOUSE Calpastatin OS=Mus musculus GN=Cast PE=2 SV=2 30 8.1
sp|O33500|CH60_PSEST 60 kDa chaperonin OS=Pseudomonas stutzeri G... 30 8.1
sp|Q3K7L6|CH60_PSEPF 60 kDa chaperonin OS=Pseudomonas fluorescen... 30 8.1

>sp|P44991|LYXK_HAEIN Probable L-xylulose kinase OS=Haemophilus
influenzae GN=lyx PE=3 SV=1
Length = 485

Score = 30.0 bits (66), Expect = 8.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2

Query: 201 LSPFLGVKTVESASFFEGSPPLAELFNVSEPAMCCSLKDEISAN 70
++ ++ + E + EG P + LF+V A+C LKD+ N
Sbjct: 216 IAGYVTSRAAEQSGLVEGIPVVGGLFDVVSTALCADLKDDQHLN 259


>sp|P51125|ICAL_MOUSE Calpastatin OS=Mus musculus GN=Cast PE=2 SV=2
Length = 788

Score = 30.0 bits (66), Expect = 8.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2

Query: 338 NIAKH-----QEHVAKQTALSQSRGSGISRTPSELKSGFKD 445
N+ KH +H K+ ALS+S +S PSE K+ F+D
Sbjct: 143 NLPKHTSSTGSKHAHKEKALSRSNEQMVSEKPSESKTKFQD 183


>sp|O33500|CH60_PSEST 60 kDa chaperonin OS=Pseudomonas stutzeri
GN=groL PE=3 SV=1
Length = 552

Score = 30.0 bits (66), Expect = 8.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2

Query: 272 TDLKSKLKAKILDANQDKSGLDNIAKHQEHVAKQTALSQSRGSGI 406
TD K+ + + AN D S D IA+ E V K+ ++ GSG+
Sbjct: 139 TDSKAIAQVGTISANSDSSIGDIIAEAMERVGKEGVITVEEGSGL 183


>sp|Q3K7L6|CH60_PSEPF 60 kDa chaperonin OS=Pseudomonas fluorescens
(strain Pf0-1) GN=groL PE=3 SV=1
Length = 548

Score = 30.0 bits (66), Expect = 8.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2

Query: 272 TDLKSKLKAKILDANQDKSGLDNIAKHQEHVAKQTALSQSRGSGI 406
TD K+ + + AN D S D IA+ E V K+ ++ GSG+
Sbjct: 139 TDTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEGSGL 183


tr_hit_id A7R8E3
Definition tr|A7R8E3|A7R8E3_VITVI Chromosome undetermined scaffold_2479, whole genome shotgun sequence OS=Vitis vinifera
Align length 79
Score (bit) 34.3
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913076|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_C03.
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R8E3|A7R8E3_VITVI Chromosome undetermined scaffold_2479, wh... 34 4.7
tr|A5CB80|A5CB80_VITVI Putative uncharacterized protein OS=Vitis... 34 4.7

>tr|A7R8E3|A7R8E3_VITVI Chromosome undetermined scaffold_2479, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00011318001 PE=4 SV=1
Length = 285

Score = 34.3 bits (77), Expect = 4.7
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -2

Query: 279 KSVLTFEPSDIFP*LELEPLNCLDFPLSPFLGVKTVESASFFEGSPPLAELFNVSEPAMC 100
K VL+ P+ P E+E N P SP L +K VE + P++ + +SE +
Sbjct: 48 KEVLSETPAPKPPPTEVEEENTT--PPSPKLALKKVEEEEKIQEKVPVSTVEEISEISEI 105

Query: 99 CSLKDEISANFSTSSRG*D 43
CS+ + +S T R D
Sbjct: 106 CSMSESVSTTTITERRDDD 124


>tr|A5CB80|A5CB80_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_021768 PE=4 SV=1
Length = 290

Score = 34.3 bits (77), Expect = 4.7
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -2

Query: 279 KSVLTFEPSDIFP*LELEPLNCLDFPLSPFLGVKTVESASFFEGSPPLAELFNVSEPAMC 100
K VL+ P+ P E+E N P SP L +K VE + P++ + +SE +
Sbjct: 84 KEVLSETPAPKPPPTEVEEENTT--PPSPKLALKKVEEEEKIQEKVPVSTVEEISEISEI 141

Query: 99 CSLKDEISANFSTSSRG*D 43
CS+ + +S T R D
Sbjct: 142 CSMSESVSTTTITERRDDD 160