BP913045 |
Clone id |
YMU001_000025_G09 |
Library |
YMU01 |
Length |
326 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000025_G09. |
Accession |
BP913045 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATCCCTTTACGTTCCAAAATTGGATAGTGAGCGACTCCATCAGTAATAAGGGGTTCATCG TCATAGAGGAATGAATTGTATAGCATCCAAATCATTCCGCCCCCCCCGTTGGTCTTAAGA GAATCCCGGGGTTCCAAGTCAGGGGATTTCTTTTCTTGCAGTTGTGCAAATGGATTGTGC AGTGGGACAGTGAAACCCACTCCTTTCTCAGGGGTGGAGGATGGATTAGATCCTTTCACC TCAGTGTTCTCACGACTTGAAGCGCTTTGGAGTCTCTTGCCATTGCCTTCACCCTTTTGG CTCTTTTCAGACCAGGACTTGAACAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CWK8 |
Definition |
sp|Q9CWK8|SNX2_MOUSE Sorting nexin-2 OS=Mus musculus |
Align length |
27 |
Score (bit) |
33.1 |
E-value |
0.45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XI72 |
Definition |
tr|Q7XI72|Q7XI72_ORYSJ Putative pre-mRNA splicing factor SF2 OS=Oryza sativa subsp. japonica |
Align length |
64 |
Score (bit) |
36.6 |
E-value |
0.63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913045|Adiantum capillus-veneris mRNA, clone: YMU001_000025_G09. (326 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XI72|Q7XI72_ORYSJ Putative pre-mRNA splicing factor SF2 OS=... 37 0.63 tr|Q0D3Q1|Q0D3Q1_ORYSJ Os07g0673500 protein OS=Oryza sativa subs... 37 0.63 tr|A6MZR5|A6MZR5_ORYSI Pre mRNA splicing factor sf2 (Fragment) O... 37 0.63 tr|B6M188|B6M188_BRAFL Putative uncharacterized protein OS=Branc... 36 0.83 tr|B5E1G0|B5E1G0_DROPS GA25088 OS=Drosophila pseudoobscura pseud... 36 0.83 tr|B4H501|B4H501_DROPE GL10137 OS=Drosophila persimilis GN=GL101... 36 0.83 tr|Q4WP26|Q4WP26_ASPFU Putative uncharacterized protein OS=Asper... 36 0.83 tr|B0Y5X2|B0Y5X2_ASPFC Putative uncharacterized protein OS=Asper... 36 0.83 tr|A8RG95|A8RG95_9CLOT Putative uncharacterized protein OS=Clost... 36 1.1 tr|B5X243|B5X243_SALSA Programmed cell death protein 4 OS=Salmo ... 35 2.4 tr|Q586E3|Q586E3_9TRYP Putative uncharacterized protein OS=Trypa... 34 3.2 tr|Q586D6|Q586D6_9TRYP Putative uncharacterized protein OS=Trypa... 34 3.2 tr|P83954|P83954_TORCA Postsynaptic membrane protein OS=Torpedo ... 34 4.1 tr|Q91VZ1|Q91VZ1_MOUSE Snx2 protein OS=Mus musculus GN=Snx2 PE=2... 33 7.0 tr|Q3U5L3|Q3U5L3_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.0 tr|B2RYP4|B2RYP4_RAT Sorting nexin 2 OS=Rattus norvegicus GN=Snx... 33 7.0 tr|A8MD33|A8MD33_CALMQ Sulfite reductase, dissimilatory-type bet... 33 7.0 tr|B0JZ66|B0JZ66_XENTR LOC100145160 protein OS=Xenopus tropicali... 33 9.2 tr|A8JFL8|A8JFL8_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 9.2 tr|B5DVX1|B5DVX1_DROPS GA26251 OS=Drosophila pseudoobscura pseud... 33 9.2 tr|B4GMC7|B4GMC7_DROPE GL12276 OS=Drosophila persimilis GN=GL122... 33 9.2 tr|A9V6E8|A9V6E8_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.2 tr|A5E520|A5E520_LODEL Putative uncharacterized protein OS=Lodde... 33 9.2
>tr|Q7XI72|Q7XI72_ORYSJ Putative pre-mRNA splicing factor SF2 OS=Oryza sativa subsp. japonica GN=P0470D12.143-1 PE=4 SV=1 Length = 362
Score = 36.6 bits (83), Expect = 0.63 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = -1
Query: 320 KSWSEKSQKGEGNGKRLQSASSRENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSP 141 KS KS + + R +SASSR +E KG +PS +P + N A +K+SP Sbjct: 278 KSPKGKSSRRSASRSRSRSASSRSRSESKGRSPSRSPARSQSPNTSPANGDAASPKKRSP 337
Query: 140 DLEP 129 P Sbjct: 338 SRSP 341
>tr|Q0D3Q1|Q0D3Q1_ORYSJ Os07g0673500 protein OS=Oryza sativa subsp. japonica GN=Os07g0673500 PE=4 SV=1 Length = 296
Score = 36.6 bits (83), Expect = 0.63 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = -1
Query: 320 KSWSEKSQKGEGNGKRLQSASSRENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSP 141 KS KS + + R +SASSR +E KG +PS +P + N A +K+SP Sbjct: 212 KSPKGKSSRRSASRSRSRSASSRSRSESKGRSPSRSPARSQSPNTSPANGDAASPKKRSP 271
Query: 140 DLEP 129 P Sbjct: 272 SRSP 275
>tr|A6MZR5|A6MZR5_ORYSI Pre mRNA splicing factor sf2 (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 154
Score = 36.6 bits (83), Expect = 0.63 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = -1
Query: 320 KSWSEKSQKGEGNGKRLQSASSRENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSP 141 KS KS + + R +SASSR +E KG +PS +P + N A +K+SP Sbjct: 70 KSPKGKSSRRSASRSRSRSASSRSRSESKGRSPSRSPARSQSPNTSPANGDAASPKKRSP 129
Query: 140 DLEP 129 P Sbjct: 130 SRSP 133
>tr|B6M188|B6M188_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_121497 PE=4 SV=1 Length = 1397
Score = 36.2 bits (82), Expect = 0.83 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%) Frame = -1
Query: 311 SEKSQKGEGNGKRLQSASS----RENTEVKGSNPSSTPEKGVGF----TVP-LHNPFAQL 159 S++S G G +LQ +S + ++ S PS PEK VGF T P L PF++ Sbjct: 779 SDQSLDGSAKGLKLQGDTSSVDLNTSMDLGASIPSHQPEKKVGFGREDTAPDLFAPFSRF 838
Query: 158 QEKKSPDLEPRDSLK 114 + + PD + SLK Sbjct: 839 KSGEEPDSGQKSSLK 853
>tr|B5E1G0|B5E1G0_DROPS GA25088 OS=Drosophila pseudoobscura pseudoobscura GN=GA25088 PE=4 SV=1 Length = 791
Score = 36.2 bits (82), Expect = 0.83 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 10/103 (9%) Frame = -1
Query: 308 EKSQKGEGNGKRLQSASSR-ENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSPDLE 132 E+++ GEG + ++ A +R E+ E G+ P++ G L N F + Sbjct: 230 EEAKTGEGADEGVEEAEARAEDEETAGAQPAAATASGK--KRKLINQFNYCERAALTYTN 287
Query: 131 PRDSLKTN---------GGGGMIWMLYNSFLYDDEPLITDGVA 30 P S+ T GG + W++Y+S+L D E DG A Sbjct: 288 PTRSVDTQTIPPPRSQFGGNVLQWVIYDSYLQDFEAQSKDGAA 330
>tr|B4H501|B4H501_DROPE GL10137 OS=Drosophila persimilis GN=GL10137 PE=4 SV=1 Length = 562
Score = 36.2 bits (82), Expect = 0.83 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 10/103 (9%) Frame = -1
Query: 308 EKSQKGEGNGKRLQSASSR-ENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSPDLE 132 E+++ GEG + ++ A +R E+ E G+ P++ G L N F + Sbjct: 180 EEAKTGEGADEGVEEAETRAEDEETAGAQPAAATASGK--KRKLINQFNYCERAALTYTN 237
Query: 131 PRDSLKTN---------GGGGMIWMLYNSFLYDDEPLITDGVA 30 P S+ T GG + W++Y+S+L D E DG A Sbjct: 238 PTRSVDTQTIPPPRSQFGGNVLQWVIYDSYLQDFEAQSKDGTA 280
>tr|Q4WP26|Q4WP26_ASPFU Putative uncharacterized protein OS=Aspergillus fumigatus GN=AFUA_4G07790 PE=4 SV=2 Length = 687
Score = 36.2 bits (82), Expect = 0.83 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -1
Query: 314 WSEKSQKGEGNGKRLQSASSRENTEVKGSNPSSTPEKGVGFT----VPLHNPFAQLQEKK 147 W K Q+ + + + AS+ + PS++P+ V VPL + L K+ Sbjct: 38 WVTKFQEPDNDQTSISEASASRSIRSSDRRPSASPKSPVFIDSLPQVPLALDSSNLNSKR 97
Query: 146 SPDLEPRDSLKTNGGGGMIWMLYNSFLYDDEPLITD 39 + + L+TNGGG + L++ D P +TD Sbjct: 98 PEEPSETEVLETNGGGVLCDNLWDLQSTDSLPELTD 133
>tr|B0Y5X2|B0Y5X2_ASPFC Putative uncharacterized protein OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_064890 PE=4 SV=1 Length = 687
Score = 36.2 bits (82), Expect = 0.83 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = -1
Query: 314 WSEKSQKGEGNGKRLQSASSRENTEVKGSNPSSTPEKGVGFT----VPLHNPFAQLQEKK 147 W K Q+ + + + AS+ + PS++P+ V VPL + L K+ Sbjct: 38 WVTKFQEPDNDQTSISEASASRSIRSSDRRPSASPKSPVFIDSLPQVPLALDSSNLNSKR 97
Query: 146 SPDLEPRDSLKTNGGGGMIWMLYNSFLYDDEPLITD 39 + + L+TNGGG + L++ D P +TD Sbjct: 98 PEEPSETEVLETNGGGVLCDNLWDLQSTDSLPELTD 133
>tr|A8RG95|A8RG95_9CLOT Putative uncharacterized protein OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_00080 PE=4 SV=1 Length = 475
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +1
Query: 76 LYSIQIIPPPPLVLRESRGSKSG-DFFSCSCANGLCSGTVKPTPFSGVEDGLDPFTSVFS 252 LY + + P P LV R + G+ D F+ + + + G+E+G +PF+ +FS Sbjct: 203 LYEVSVTPKPGLVDRNNTGAHQDMDIFTFEASAVSLNHYFEQFALCGIENGHEPFSRIFS 262
Query: 253 RLEA 264 RL + Sbjct: 263 RLRS 266
>tr|B5X243|B5X243_SALSA Programmed cell death protein 4 OS=Salmo salar GN=PDCD4 PE=2 SV=1 Length = 472
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -1
Query: 278 KRLQSASSRENTEVKGSNPSSTPEKGVGFTVPLHNPFAQLQEKKSPDLEPRDSLKTNGGG 99 +RL+ SSR++ + + P +G TVP +P ++L ++KS + R K G G Sbjct: 63 RRLRKTSSRDSGRGDSFSDNGDPSRGTNGTVPPTSPKSKLLDRKSRAGKGRGLPKKGGAG 122
Query: 98 GM-IW 87 G +W Sbjct: 123 GKGVW 127
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