BP913031 |
Clone id |
YMU001_000025_F06 |
Library |
YMU01 |
Length |
302 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000025_F06. |
Accession |
BP913031 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1500Contig1 |
Sequence |
CTTCGACGTCGTCTTTTCTAACAGTATATCGTGTTACATGATCCTCCAATGTCTACAAAT CGAAACTATCAGTATGTCCGCAGGCAGCCAACAGTGGGTGCACCCACAAATGGGCAAAGT AGCTCCAGGATCAATACTCCAGTAAGTTCCTCACTGGCAACTTTTGGTAACTCTTATGAT TGGAAGTCGCAAATCAAGAGGCCCCCTGCGGATACTCGTTATAAAACTGAGGATGTGACA GCAACAAAAGGTAATGAATTCGAGGACTATTTTTTGAAAAGGGAGCTGCTCATGGGAATA TT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7XMK8 |
Definition |
sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica |
Align length |
95 |
Score (bit) |
90.5 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QIS9 |
Definition |
tr|A7QIS9|A7QIS9_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
87 |
Score (bit) |
92.0 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913031|Adiantum capillus-veneris mRNA, clone: YMU001_000025_F06. (302 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QIS9|A7QIS9_VITVI Chromosome chr2 scaffold_105, whole genom... 92 1e-17 tr|B7EJQ0|B7EJQ0_ORYSJ cDNA clone:J023100C24, full insert sequen... 91 4e-17 tr|A2XVU7|A2XVU7_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|B8BHR5|B8BHR5_ORYSI Putative uncharacterized protein OS=Oryza... 87 4e-16 tr|B7ELN4|B7ELN4_ORYSJ cDNA clone:J033023C03, full insert sequen... 87 4e-16 tr|A3C696|A3C696_ORYSJ Putative uncharacterized protein OS=Oryza... 87 4e-16 tr|B8A2Z7|B8A2Z7_MAIZE Putative uncharacterized protein OS=Zea m... 85 2e-15 tr|B8AFZ8|B8AFZ8_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|B7EKD5|B7EKD5_ORYSJ cDNA clone:J013124F19, full insert sequen... 85 2e-15 tr|A3A9H3|A3A9H3_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|B6T965|B6T965_MAIZE ATP-dependent RNA helicase dhh1 OS=Zea ma... 84 3e-15 tr|B6SWB3|B6SWB3_MAIZE ATP-dependent RNA helicase dhh1 OS=Zea ma... 84 3e-15 tr|B6TLY3|B6TLY3_MAIZE ATP-dependent RNA helicase dhh1 OS=Zea ma... 83 6e-15 tr|A9SKD4|A9SKD4_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14 tr|A9SHW4|A9SHW4_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14 tr|B8LKI3|B8LKI3_PICSI Putative uncharacterized protein OS=Picea... 82 2e-14 tr|A5C9D5|A5C9D5_VITVI Putative uncharacterized protein (Chromos... 82 2e-14 tr|B4FR21|B4FR21_MAIZE ATP-dependent RNA helicase dhh1 OS=Zea ma... 81 3e-14 tr|A7S8H2|A7S8H2_NEMVE Predicted protein OS=Nematostella vectens... 75 2e-12 tr|Q4RRC6|Q4RRC6_TETNG Chromosome 16 SCAF15002, whole genome sho... 73 6e-12 tr|Q4T821|Q4T821_TETNG Chromosome undetermined SCAF7914, whole g... 73 8e-12 tr|A4RYS0|A4RYS0_OSTLU Predicted protein OS=Ostreococcus lucimar... 72 1e-11 tr|A5K7L9|A5K7L9_PLAVI ATP-dependent RNA helicase, putative OS=P... 71 2e-11 tr|Q017E1|Q017E1_OSTTA Putative RNA helicase (ISS) OS=Ostreococc... 71 3e-11 tr|B7ZRN4|B7ZRN4_XENLA P54H protein OS=Xenopus laevis GN=P54H PE... 70 5e-11 tr|B1WAU0|B1WAU0_XENTR DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 ... 70 5e-11 tr|A8IT25|A8IT25_CHLRE Cytoplasmic DExD/H-box RNA helicase OS=Ch... 70 5e-11 tr|O97285|O97285_PLAF7 Putative ATP-dependent RNA Helicase (Atp-... 70 7e-11 tr|A0T1H2|A0T1H2_PLAFA RNA helicase OS=Plasmodium falciparum PE=... 70 7e-11 tr|B3L3Z3|B3L3Z3_PLAKH ATP-dependent RNA helicase, putative OS=P... 69 9e-11
>tr|A7QIS9|A7QIS9_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000382001 PE=3 SV=1 Length = 480
Score = 92.0 bits (227), Expect = 1e-17 Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1
Query: 43 PPMSTNRNYQYVRRQP-TVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADTR 219 PPM + Q++RR P +P N + + V SS S DWK+Q++ PP DTR Sbjct: 41 PPMQNQQQQQWLRRIPIATDSPANEVEKTVQSEVVDSS------SQDWKAQLRVPPPDTR 94
Query: 220 YKTEDVTATKGNEFEDYFLKRELLMGI 300 YKTEDVTATKGNEFEDYFLKRELLMGI Sbjct: 95 YKTEDVTATKGNEFEDYFLKRELLMGI 121
>tr|B7EJQ0|B7EJQ0_ORYSJ cDNA clone:J023100C24, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 498
Score = 90.5 bits (223), Expect = 4e-17 Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 2/95 (2%) Frame = +1
Query: 22 QYIVLHDPPMSTNRNYQYVR--RQPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQI 195 QY+ P T N Q+ + R+ + A G S + PV+ + + +S DWK+Q+ Sbjct: 48 QYVQRQPQPQQTPHNSQHQQWLRRNQIAAEAAGASEQKA-PPVADGIDS--SSQDWKAQL 104
Query: 196 KRPPADTRYKTEDVTATKGNEFEDYFLKRELLMGI 300 K PP DTRY+TEDVTATKGNEFEDYFLKRELLMGI Sbjct: 105 KLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMGI 139
>tr|A2XVU7|A2XVU7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16765 PE=3 SV=1 Length = 484
Score = 90.5 bits (223), Expect = 4e-17 Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 2/95 (2%) Frame = +1
Query: 22 QYIVLHDPPMSTNRNYQYVR--RQPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQI 195 QY+ P T N Q+ + R+ + A G S + PV+ + + +S DWK+Q+ Sbjct: 34 QYVQRQPQPQQTPHNSQHQQWLRRNQIAAEAAGASEQKA-PPVADGIDS--SSQDWKAQL 90
Query: 196 KRPPADTRYKTEDVTATKGNEFEDYFLKRELLMGI 300 K PP DTRY+TEDVTATKGNEFEDYFLKRELLMGI Sbjct: 91 KLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMGI 125
>tr|B8BHR5|B8BHR5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34232 PE=4 SV=1 Length = 524
Score = 87.0 bits (214), Expect = 4e-16 Identities = 44/88 (50%), Positives = 58/88 (65%) Frame = +1
Query: 37 HDPPMSTNRNYQYVRRQPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADT 216 H S+++ Q++RR A +G+ ++R + A +S DWK+Q+ P DT Sbjct: 81 HAQRNSSSQQQQWLRRDQATAAAASGEVAARTAAQLE---AVDSSSEDWKAQLNLPAPDT 137
Query: 217 RYKTEDVTATKGNEFEDYFLKRELLMGI 300 RY+TEDVTATKGNEFEDYFLKRELLMGI Sbjct: 138 RYRTEDVTATKGNEFEDYFLKRELLMGI 165
>tr|B7ELN4|B7ELN4_ORYSJ cDNA clone:J033023C03, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 521
Score = 87.0 bits (214), Expect = 4e-16 Identities = 44/88 (50%), Positives = 58/88 (65%) Frame = +1
Query: 37 HDPPMSTNRNYQYVRRQPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADT 216 H S+++ Q++RR A +G+ ++R + A +S DWK+Q+ P DT Sbjct: 78 HAQRNSSSQQQQWLRRDQATAAAASGEVAARTAAQLE---AVDSSSEDWKAQLNLPAPDT 134
Query: 217 RYKTEDVTATKGNEFEDYFLKRELLMGI 300 RY+TEDVTATKGNEFEDYFLKRELLMGI Sbjct: 135 RYRTEDVTATKGNEFEDYFLKRELLMGI 162
>tr|A3C696|A3C696_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030818 PE=4 SV=1 Length = 821
Score = 87.0 bits (214), Expect = 4e-16 Identities = 44/88 (50%), Positives = 58/88 (65%) Frame = +1
Query: 37 HDPPMSTNRNYQYVRRQPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADT 216 H S+++ Q++RR A +G+ ++R + A +S DWK+Q+ P DT Sbjct: 78 HAQRNSSSQQQQWLRRDQATAAAASGEVAARTAAQLE---AVDSSSEDWKAQLNLPAPDT 134
Query: 217 RYKTEDVTATKGNEFEDYFLKRELLMGI 300 RY+TEDVTATKGNEFEDYFLKRELLMGI Sbjct: 135 RYRTEDVTATKGNEFEDYFLKRELLMGI 162
>tr|B8A2Z7|B8A2Z7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 525
Score = 85.1 bits (209), Expect = 2e-15 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 3/80 (3%) Frame = +1
Query: 70 QYVRRQPTVGAPTNGQSSSRINTPVSSSLATFG---NSYDWKSQIKRPPADTRYKTEDVT 240 Q++RR + T+G + + ++ S A G +S DWK+Q+K PP DTRY+TEDVT Sbjct: 88 QWLRRSQ-IARETSGAAVTSEPKSLAPSTAADGVDSSSQDWKAQLKLPPPDTRYRTEDVT 146
Query: 241 ATKGNEFEDYFLKRELLMGI 300 ATKGNEFEDYFLKRELLMGI Sbjct: 147 ATKGNEFEDYFLKRELLMGI 166
>tr|B8AFZ8|B8AFZ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08237 PE=4 SV=1 Length = 483
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 4/81 (4%) Frame = +1
Query: 70 QYVRR----QPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADTRYKTEDV 237 Q++RR + G N + + +P + + +S DWK+Q+K PP DTRY+TEDV Sbjct: 46 QWLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDS--SSQDWKAQLKLPPQDTRYRTEDV 103
Query: 238 TATKGNEFEDYFLKRELLMGI 300 TATKGNEFEDYFLKRELLMGI Sbjct: 104 TATKGNEFEDYFLKRELLMGI 124
>tr|B7EKD5|B7EKD5_ORYSJ cDNA clone:J013124F19, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 508
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 4/81 (4%) Frame = +1
Query: 70 QYVRR----QPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADTRYKTEDV 237 Q++RR + G N + + +P + + +S DWK+Q+K PP DTRY+TEDV Sbjct: 71 QWLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDS--SSQDWKAQLKLPPQDTRYRTEDV 128
Query: 238 TATKGNEFEDYFLKRELLMGI 300 TATKGNEFEDYFLKRELLMGI Sbjct: 129 TATKGNEFEDYFLKRELLMGI 149
>tr|A3A9H3|A3A9H3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_007445 PE=3 SV=1 Length = 567
Score = 84.7 bits (208), Expect = 2e-15 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 4/81 (4%) Frame = +1
Query: 70 QYVRR----QPTVGAPTNGQSSSRINTPVSSSLATFGNSYDWKSQIKRPPADTRYKTEDV 237 Q++RR + G N + + +P + + +S DWK+Q+K PP DTRY+TEDV Sbjct: 71 QWLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDS--SSQDWKAQLKLPPQDTRYRTEDV 128
Query: 238 TATKGNEFEDYFLKRELLMGI 300 TATKGNEFEDYFLKRELLMGI Sbjct: 129 TATKGNEFEDYFLKRELLMGI 149
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