BP912958 |
Clone id |
YMU001_000024_G08 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000024_G08. |
Accession |
BP912958 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGACTGCATACATCATTTTAGAGATGGAGCTTGCTCCTGTGAAGATAGAGACTATGTAAA TAGTACATGTAAGAATCACATATTGACAAGGAAGTAAAGAGTCTTTTGGGGTATCATGAA AGATCTCAAGCTCCCTTGAATAGTGCACCGGCCCCTTCTAAAGGCATGTTGCGCAGCTTC TCTCTTTTGCTTTGCAGACTCCTATCTGGCAAGCCACTACAAAAAGGTCTGTAGTATCTC TTCTTTGTGGTGGAGGGACTTTTCAAGAGGGAAGGATCCATGATTGGCATATTCCTGAAG TATTGATGGGGATTTTGCTCTTGTTCTTGCTTTGGCATATTCCTGAAGCATTGATGGGGA TTTATTAGCTAGCAAATGCTTTAATAGGTCACAGTCAAATTGTAATTGAATGTGAAGGGT ATATCTCATTGCCTACTCATTTATATTGGAGAATCTTGAATGAGAATTGTCAAATTTGAA GGTTTATACTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q683I9 |
Definition |
sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana |
Align length |
17 |
Score (bit) |
31.6 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O58162 |
Definition |
tr|O58162|O58162_PYRHO Putative uncharacterized protein PH0425 OS=Pyrococcus horikoshii |
Align length |
62 |
Score (bit) |
37.0 |
E-value |
0.49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912958|Adiantum capillus-veneris mRNA, clone: YMU001_000024_G08. (493 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O58162|O58162_PYRHO Putative uncharacterized protein PH0425 O... 37 0.49 tr|Q2BBL2|Q2BBL2_9BACI Transcriptional regulator, AraC family pr... 35 1.9 tr|B5EQB0|B5EQB0_ACIF5 Putative uncharacterized protein OS=Acidi... 34 3.2 tr|B7J9J3|B7J9J3_THIFE Putative uncharacterized protein OS=Acidi... 34 3.2 tr|B4LXD7|B4LXD7_DROVI GJ24368 OS=Drosophila virilis GN=GJ24368 ... 34 3.2 tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genom... 34 3.3 tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis... 34 3.3 tr|Q54KL7|Q54KL7_DICDI Putative uncharacterized protein OS=Dicty... 34 3.3 tr|Q4Q1D1|Q4Q1D1_LEIMA Putative uncharacterized protein OS=Leish... 34 4.3 tr|B8MPN4|B8MPN4_9EURO Putative uncharacterized protein OS=Talar... 33 7.1 tr|Q9LFW4|Q9LFW4_ARATH PCMP-H2 protein (Fragment) OS=Arabidopsis... 33 7.3 tr|B0TJE2|B0TJE2_SHEHH Cytochrome bd ubiquinol oxidase subunit I... 33 9.3 tr|B6KF54|B6KF54_TOXGO Sec7 domain-containing protein OS=Toxopla... 33 9.3
>tr|O58162|O58162_PYRHO Putative uncharacterized protein PH0425 OS=Pyrococcus horikoshii GN=PH0425 PE=4 SV=1 Length = 440
Score = 37.0 bits (84), Expect = 0.49 Identities = 18/62 (29%), Positives = 33/62 (53%) Frame = -3
Query: 341 NMPKQEQEQNPHQYFRNMPIMDPSLLKSPSTTKKRYYRPFCSGLPDRSLQSKREKLRNMP 162 ++PKQ+ + + + +N+ + LLK P K+ +Y F G+ ++ L EK+ P Sbjct: 102 DLPKQDNFECLYHFIQNLIAKEKGLLKPPRNMKEWFYYMFGRGIAEKYLIPYNEKIWKYP 161
Query: 161 LE 156 LE Sbjct: 162 LE 163
>tr|Q2BBL2|Q2BBL2_9BACI Transcriptional regulator, AraC family protein OS=Bacillus sp. NRRL B-14911 GN=B14911_16400 PE=4 SV=1 Length = 311
Score = 35.0 bits (79), Expect = 1.9 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = -3
Query: 347 FRNMPKQEQEQNPHQYFRNMPIMDPSLLKSP--STTKKRYYRPFCSGLPD 204 F N+ K+EQ+QNP+ FR + + ++ P +T ++ P+ G+PD Sbjct: 129 FSNIKKEEQQQNPYNEFRWLDLDKVRTIELPVCATVNRQSVGPYTEGIPD 178
>tr|B5EQB0|B5EQB0_ACIF5 Putative uncharacterized protein OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=Lferr_1113 PE=4 SV=1 Length = 165
Score = 34.3 bits (77), Expect = 3.2 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = +3
Query: 231 VVSLLCGGGTFQEGRIHDWHIPEVLMGILLLFLLWHIPEALMGIY*LANALIG--HSQIV 404 +++LLC G T +HDW VL+ +LL +++W P +L + AL+ + Sbjct: 39 ILALLCAGFTM----LHDWRWGLVLLVVLLAWVVWRCPWSLRTNQDMPEALLSGRDGGLQ 94
Query: 405 IECEGYISLPTHL 443 + + LP HL Sbjct: 95 VRMDSGSVLPVHL 107
>tr|B7J9J3|B7J9J3_THIFE Putative uncharacterized protein OS=Acidithiobacillus ferrooxidans ATCC 23270 GN=AFE_1393 PE=4 SV=1 Length = 176
Score = 34.3 bits (77), Expect = 3.2 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = +3
Query: 231 VVSLLCGGGTFQEGRIHDWHIPEVLMGILLLFLLWHIPEALMGIY*LANALIG--HSQIV 404 +++LLC G T +HDW VL+ +LL +++W P +L + AL+ + Sbjct: 50 ILALLCAGFTM----LHDWRWGLVLLVVLLAWVVWRCPWSLRTNQDMPEALLSGRDGGLQ 105
Query: 405 IECEGYISLPTHL 443 + + LP HL Sbjct: 106 VRMDSGSVLPVHL 118
>tr|B4LXD7|B4LXD7_DROVI GJ24368 OS=Drosophila virilis GN=GJ24368 PE=4 SV=1 Length = 1030
Score = 34.3 bits (77), Expect = 3.2 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = -3
Query: 356 HQCFRNMPKQEQEQNPHQYFRNMPIMDPSLLKSPSTTKKRYYRPFCSGLPDRSLQSKREK 177 HQ + +Q+Q+Q Q + P DP+ + + ++ C G SLQ K EK Sbjct: 380 HQAAQQQLQQQQQQQQQQQQKQQPYTDPNTIDQYLLSWNNFHGNMCRGF--HSLQ-KDEK 436
Query: 176 LRNMPLEGAGALFK 135 + ++ + G +FK Sbjct: 437 MVDVTIAAGGKIFK 450
>tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026234001 PE=4 SV=1 Length = 748
Score = 34.3 bits (77), Expect = 3.3 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2
Query: 2 DCIHHFRDGACSCED 46 +C HHFR+GACSC D Sbjct: 732 NCFHHFREGACSCSD 746
>tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002466 PE=4 SV=1 Length = 440
Score = 34.3 bits (77), Expect = 3.3 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2
Query: 2 DCIHHFRDGACSCED 46 +C HHFR+GACSC D Sbjct: 424 NCFHHFREGACSCSD 438
>tr|Q54KL7|Q54KL7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0219211 PE=4 SV=1 Length = 728
Score = 34.3 bits (77), Expect = 3.3 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -1
Query: 214 ACQIGVCKAKERSCATCL*KGPVHYSRELEIFHDTPKDSLLPCQYVILTC 65 A ++G K +R C+TCL K HY+RE+ I D P C + + TC Sbjct: 673 AQELGKPKCNKRFCSTCLLK---HYNREVNILKDGPS---WECPFCLNTC 716
>tr|Q4Q1D1|Q4Q1D1_LEIMA Putative uncharacterized protein OS=Leishmania major GN=LmjF36.2880 PE=4 SV=1 Length = 1717
Score = 33.9 bits (76), Expect = 4.3 Identities = 26/94 (27%), Positives = 45/94 (47%) Frame = -1
Query: 298 SGICQSWILPS*KVPPPQRRDTTDLFVVACQIGVCKAKERSCATCL*KGPVHYSRELEIF 119 S C ++P+ +V PP + + +F + C V + A C + V+Y + F Sbjct: 606 SQACPYTVVPTQQVVPP---NGSAVFQLQCSSTV---SDELPAACTLECYVNYE-SMSAF 658
Query: 118 HDTPKDSLLPCQYVILTCTIYIVSIFTGASSISK 17 + P ++P Q +TCT I+S+FT A S+ Sbjct: 659 YLAPDACVVPPQCFTVTCTSAIISVFTSAKQKSQ 692
>tr|B8MPN4|B8MPN4_9EURO Putative uncharacterized protein OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_106830 PE=4 SV=1 Length = 244
Score = 33.1 bits (74), Expect = 7.1 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -3
Query: 344 RNMPKQEQEQN-PHQYFRNMPIMDPSLLKSPSTTKKRYYRPFCSGLPDRSLQSKREKLRN 168 R +PK+EQEQ+ PHQ + ++P+ K TT+ R C P S++ + + L+N Sbjct: 74 RRLPKREQEQDPPHQPSHS---IEPASKKMQCTTQSR----GCLDKPTPSIEGESDSLQN 126
Query: 167 MPLE 156 LE Sbjct: 127 TTLE 130
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