BP912902
Clone id YMU001_000024_B06
Library
Length 477
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCATGCTCCATAAGATCATCCTCAAGCGGTGTTGTCTCAATCTCTCCCTCGACATCTATC
TTTGTCTGTGGGATCGGATCATCCTCTGCAAGCGTCTACTCCGTGAATGCATCACGTTGG
TTCGACTTGGAAAGCATCTTCAAATTTGAGAAAACATATATGAGATCATTGGCTCTCTAC
ACATCAAGCTGACTCCTCTTTTTTGAGGCAACATGAGTACACACACTCCAAAGTTGCTCC
AAGCAACTCGTAGTGCATGTTGGGCTGAGAATGCGAATAGCCAAATCCTGTAAGCCACCC
AATCCCGTCCTAAACTCCTCTCACCAAAGAGCACTCCCCATCTCGAAGCAAGTTTGTTGT
GCATTGGATATGTGACAAATTTCTCCCTTTTCATTCGTGTAGACATTAATCTGCCTTCGA
ATCTCGGTCCTTTCCTTGGGGTCCGGCACAAGGCACCCAAGGATGGTTTTCCAACCA
■■Homology search results ■■ -
sp_hit_id P50319
Definition sp|P50319|PGKC_RALEH Phosphoglycerate kinase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
Align length 43
Score (bit) 33.9
E-value 0.38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912902|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B06.
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P50319|PGKC_RALEH Phosphoglycerate kinase, chromosomal OS=Ral... 34 0.38
sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS P... 30 5.5
sp|Q03YW0|Y496_LEUMM UPF0637 protein LEUM_0496 OS=Leuconostoc me... 30 7.2
sp|P27106|MIS_MOUSE Muellerian-inhibiting factor OS=Mus musculus... 29 9.4

>sp|P50319|PGKC_RALEH Phosphoglycerate kinase, chromosomal
OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428
/ Stanier 337) GN=cbbKC PE=3 SV=1
Length = 413

Score = 33.9 bits (76), Expect = 0.38
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3

Query: 294 ATQSRPKLLSPKSTPHLEASLLCIGYVTNFSLFIRVDINLPSN 422
AT +PK P + PH A+LL G + +FIR D+N+P +
Sbjct: 7 ATNPQPK---PAAAPHTLAALLAAGGLAGKRVFIRADLNVPQD 46


>sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=1
SV=1
Length = 972

Score = 30.0 bits (66), Expect = 5.5
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3

Query: 153 NIYEIIGSLHIKLTPLF*GNMSTHTPKLLQATRSACWAENANSQIL*ATQSRPKLLSPKS 332
N+ I+GS+ +KLT + + TP LL + + W + +S + SRP+
Sbjct: 831 NLKLIMGSMEVKLTAVAATRLICETPALLDPSAAKLWGKMLDSIV--TLVSRPEQERVLD 888

Query: 333 TPHLEASLLCIGYVTNF 383
P + +GY F
Sbjct: 889 EPEMPEISENVGYTAAF 905


>sp|Q03YW0|Y496_LEUMM UPF0637 protein LEUM_0496 OS=Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293 /
NCDO 523) GN=LEUM_0496 PE=3 SV=1
Length = 197

Score = 29.6 bits (65), Expect = 7.2
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = -3

Query: 421 FEGRLMSTRMKREKFVTYPMHNKLASRWGVLFGERSLGRDWVAYRIWLFAFSAQHALRVA 242
FE + ++ RM++ + + P + AS + G++W +A A+H R
Sbjct: 10 FEDKTLNGRMEKIRTIIDPKFEEFASIALPILNTN--GQEW-------YAHVAKHLRRTT 60

Query: 241 WSNFGVCVLMLPQKRGVSLMCR------EPMISYMFSQI*RCFPSRTNVMHSRSRRLQRM 80
++ V P KRG ++ E + + + P +TNV+ + R + +
Sbjct: 61 YAPDNTWVAFAPNKRGYKMLPHFELGIWEDNVYFYLAVEENMKPDQTNVITQKLREVSPL 120

Query: 79 IR 74
+R
Sbjct: 121 VR 122


>sp|P27106|MIS_MOUSE Muellerian-inhibiting factor OS=Mus musculus
GN=Amh PE=2 SV=1
Length = 555

Score = 29.3 bits (64), Expect = 9.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3

Query: 244 AWSNFGVCVLMLPQKRGVSLMCREPMISYMFSQI*RCFPSRT 119
AWS FG+ + + P + G +L + + +++F RCF T
Sbjct: 203 AWSGFGLILTLQPSREGATLSI-DQLQAFLFGSDSRCFTRMT 243


tr_hit_id A7QTU3
Definition tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, whole genome shotgun sequence OS=Vitis vinifera
Align length 142
Score (bit) 69.3
E-value 9.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912902|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B06.
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, who... 69 9e-11
tr|A7QN52|A7QN52_VITVI Chromosome undetermined scaffold_130, who... 65 2e-09
tr|A5BVC8|A5BVC8_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09
tr|A7QZI0|A7QZI0_VITVI Chromosome chr7 scaffold_275, whole genom... 64 3e-09
tr|A5BCE4|A5BCE4_VITVI Putative uncharacterized protein OS=Vitis... 64 3e-09
tr|A7QML5|A7QML5_VITVI Chromosome chr19 scaffold_126, whole geno... 64 4e-09
tr|A7PKN6|A7PKN6_VITVI Chromosome chr7 scaffold_20, whole genome... 64 4e-09
tr|A5BFB8|A5BFB8_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09
tr|A5B930|A5B930_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09
tr|A5B6K0|A5B6K0_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09
tr|A5ALW2|A5ALW2_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09
tr|A7QT07|A7QT07_VITVI Chromosome chr14 scaffold_164, whole geno... 64 5e-09
tr|A5C3C4|A5C3C4_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09
tr|A5AU36|A5AU36_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09
tr|A5AX25|A5AX25_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|A5AQC4|A5AQC4_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|A7PEU5|A7PEU5_VITVI Chromosome chr11 scaffold_13, whole genom... 62 1e-08
tr|A5C5V8|A5C5V8_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|A7Q530|A7Q530_VITVI Chromosome undetermined scaffold_51, whol... 61 2e-08
tr|A5B2A7|A5B2A7_VITVI Putative uncharacterized protein OS=Vitis... 61 2e-08
tr|A5C5L6|A5C5L6_VITVI Putative uncharacterized protein OS=Vitis... 60 5e-08
tr|A7R3E5|A7R3E5_VITVI Chromosome undetermined scaffold_512, who... 60 7e-08
tr|A5C743|A5C743_VITVI Putative uncharacterized protein OS=Vitis... 60 7e-08
tr|Q75G98|Q75G98_ORYSJ Putative uncharacterized protein OSJNBa00... 59 9e-08
tr|Q2QPA8|Q2QPA8_ORYSJ HAT family dimerisation domain containing... 59 9e-08
tr|Q0DJS5|Q0DJS5_ORYSJ Os05g0232800 protein OS=Oryza sativa subs... 59 9e-08
tr|O81190|O81190_ARATH Putative transposase OS=Arabidopsis thali... 59 9e-08
tr|Q0JJR3|Q0JJR3_ORYSJ Os01g0722500 protein OS=Oryza sativa subs... 59 2e-07
tr|Q3E8R3|Q3E8R3_ARATH Uncharacterized protein At5g33406.1 OS=Ar... 57 5e-07
tr|A5BMH4|A5BMH4_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07

>tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006487001 PE=4 SV=1
Length = 633

Score = 69.3 bits (168), Expect = 9e-11
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = -2

Query: 464 ILGCLVPDPKERTEIRRQINVYTNEKGEI-CHISNAQQTCFEMGSALW*EEFRTGLGGLQ 288
+L L+P R +I QI ++T G C+++ + G LW E+F LQ
Sbjct: 456 VLEKLLPTSDMRRDITNQILLFTRATGMFGCNLAREARDTVPPG--LWWEQFGDSAPVLQ 513

Query: 287 DLAIRILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDA 108
+AIRILS C+TS E+ W+ + S+KR+++D NDL+Y+ NLK+ + +
Sbjct: 514 RVAIRILSQVCSTSTFERHWNTFQQIHSEKRNKIDKETLNDLVYINYNLKLARQMKMKS- 572

Query: 107 FTE*TLAEDDPIPQTKIDVEGE 42
+E DP+ ID+ E
Sbjct: 573 ------SEADPLQFDDIDMTSE 588


>tr|A7QN52|A7QN52_VITVI Chromosome undetermined scaffold_130, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00002367001 PE=4 SV=1
Length = 478

Score = 65.1 bits (157), Expect = 2e-09
Identities = 41/146 (28%), Positives = 75/146 (51%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + + LQ A++
Sbjct: 239 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAEWWAAYGASVPNLQKFAMK 297

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 298 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 353

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 354 ----DPISLKDIDDNNEWLIRRMEDE 375


>tr|A5BVC8|A5BVC8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018067 PE=4 SV=1
Length = 629

Score = 64.7 bits (156), Expect = 2e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 390 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTKAPAEWWAAYGASAPNLQKFAMK 448

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 449 VLNLTCSASSCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 504

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 505 ----DPISLKDIDDSNEWLIGRMEDE 526


>tr|A7QZI0|A7QZI0_VITVI Chromosome chr7 scaffold_275, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00010659001
PE=4 SV=1
Length = 361

Score = 64.3 bits (155), Expect = 3e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 122 LTRDPTKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAKWWAAYGASTPNLQKFAMK 180

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 181 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 236

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 237 ----DPISLKDIDDSDEWLIKRMEDE 258


>tr|A5BCE4|A5BCE4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_012257 PE=4 SV=1
Length = 1102

Score = 64.3 bits (155), Expect = 3e-09
Identities = 42/146 (28%), Positives = 73/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T SA W + LQ ++
Sbjct: 863 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRVSAEWWAAYGASAPNLQKFVMK 921

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC S EQ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 922 VLNLTCNASGCEQNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 977

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 978 ----DPISLKDIDDSNEWLIGRMEDE 999


>tr|A7QML5|A7QML5_VITVI Chromosome chr19 scaffold_126, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002113001
PE=4 SV=1
Length = 249

Score = 63.9 bits (154), Expect = 4e-09
Identities = 37/125 (29%), Positives = 68/125 (54%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ ++++YTN +G + A +T A W + LQ AI+
Sbjct: 11 LTRDPAKQEKVVAEVSLYTNAQG-LFENELAVKTRKTRAPAEWWAAYGASAPNLQRFAIK 69

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++L+ R NDLIY+ N + + N+R+ +
Sbjct: 70 VLNLTCSASGCERNWSIFENIHSKRRNRLNHQRLNDLIYIKYNRALKKRYNERNTIDRIS 129

Query: 92 LAEDD 78
L + D
Sbjct: 130 LKDID 134


>tr|A7PKN6|A7PKN6_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019252001
PE=4 SV=1
Length = 659

Score = 63.9 bits (154), Expect = 4e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 420 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAEWWAAYGASAPNLQKFAMK 478

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 479 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 534

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 535 ----DPISLKDIDDSNEWLIGRMEDE 556


>tr|A5BFB8|A5BFB8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_020704 PE=4 SV=1
Length = 803

Score = 63.9 bits (154), Expect = 4e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 564 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAEWWAAYGASAPNLQKFAMK 622

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 623 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 678

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 679 ----DPISLKDIDDSNEWLIGRMEDE 700


>tr|A5B930|A5B930_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041109 PE=4 SV=1
Length = 707

Score = 63.9 bits (154), Expect = 4e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 468 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAEWWAAYGASAPNLQKFAMK 526

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 527 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 582

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 583 ----DPISLKDIDDSNEWLIGRMEDE 604


>tr|A5B6K0|A5B6K0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031313 PE=4 SV=1
Length = 803

Score = 63.9 bits (154), Expect = 4e-09
Identities = 41/146 (28%), Positives = 74/146 (50%)
Frame = -2

Query: 452 LVPDPKERTEIRRQINVYTNEKGEICHISNAQQTCFEMGSALW*EEFRTGLGGLQDLAIR 273
L DP ++ ++ +++++TN +G + A +T A W + LQ A++
Sbjct: 564 LTRDPAKQEKVVAEVSLFTNAQGLFGN-ELAVRTRKTRAPAEWWAAYGASAPNLQKFAMK 622

Query: 272 ILSPTCTTSCLEQLWSVCTHVASKKRSQLDV*RANDLIYVFSNLKMLSKSNQRDAFTE*T 93
+L+ TC+ S E+ WS+ ++ SK+R++LD R NDL+Y+ N + + N+R+
Sbjct: 623 VLNLTCSASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKYNRALKRRYNERNTI---- 678

Query: 92 LAEDDPIPQTKIDVEGEIETTPLEDD 15
DPI ID E +ED+
Sbjct: 679 ----DPISLKDIDDSNEWLIGRMEDE 700