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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912779
Clone id YMU001_000022_G07
Library
Length 190
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAATAAAGGATGACACTTTGTGGACAGGCAAGAGTACGACAGGCATGGGAAAAGCAATGG
GTTCTGGTTCGGGACTTGGGGTGGCGGGTGCGAGTGCAATAGTTCCTCCTGCTATACCAA
TGGGGATGGCTCCCAGCATGAGCATGGGAGTAGGAGCAAGCAAGGGATCCATGATGCAGA
TGGGGTTGAA
■■Homology search results ■■ -
sp_hit_id O07046
Definition sp|O07046|SLYD_AERHY FKBP-type peptidyl-prolyl cis-trans isomerase ilpA OS=Aeromonas hydrophila
Align length 43
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912779|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_G07.
         (190 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O07046|SLYD_AERHY FKBP-type peptidyl-prolyl cis-trans isomera...    31   1.7  
sp|P84614|SCX28_BUTSI Alpha-toxin Bs-Tx28 OS=Buthus sindicus PE=...    30   2.9  
sp|Q95QW4|CDF1_CAEEL Cation diffusion facilitator family protein...    30   2.9  
sp|P76223|YNJB_ECOLI Protein ynjB OS=Escherichia coli (strain K1...    30   3.8  
sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 ...    30   3.8  
sp|Q13393|PLD1_HUMAN Phospholipase D1 OS=Homo sapiens GN=PLD1 PE...    29   6.5  
sp|O08684|PLD1_CRIGR Phospholipase D1 OS=Cricetulus griseus GN=P...    29   6.5  
sp|Q6P3N9|ZNT7_XENTR Zinc transporter 7 OS=Xenopus tropicalis GN...    29   8.5  
sp|Q9M647|IAR1_ARATH IAA-alanine resistance protein 1 OS=Arabido...    29   8.5  

>sp|O07046|SLYD_AERHY FKBP-type peptidyl-prolyl cis-trans isomerase
           ilpA OS=Aeromonas hydrophila GN=ilpA PE=3 SV=1
          Length = 212

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = -3

Query: 173 HGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSH 45
           HG+  C + H H   H H +    YC    H       H   H
Sbjct: 152 HGAGGCGHDHGHDHDHDHGHEHGGYCGGGHHGHDHGHDHGDDH 194


>sp|P84614|SCX28_BUTSI Alpha-toxin Bs-Tx28 OS=Buthus sindicus PE=1
          SV=1
          Length = 65

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 32 EYDRHGKSNGF--WFGTWGGGCEC 97
          E  ++G  +G+  WFG WG GC C
Sbjct: 26 ECTKNGAESGYCQWFGRWGNGCWC 49


>sp|Q95QW4|CDF1_CAEEL Cation diffusion facilitator family protein 1
           OS=Caenorhabditis elegans GN=cdf-1 PE=1 SV=1
          Length = 561

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 182 HLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSH 45
           H H G    S+ H+H GSH H ++ +       H  S    H  SH
Sbjct: 239 HSHGGG---SHGHSHGGSHGHSHNNKKTKKNDGHGHSHANGHGHSH 281


>sp|P76223|YNJB_ECOLI Protein ynjB OS=Escherichia coli (strain K12)
           GN=ynjB PE=1 SV=2
          Length = 388

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +2

Query: 14  HFVDRQEYDRHGKSNGFWFGTWGGGCECNSSSCYTNGDGSQH 139
           H  D QE     K    WF  WGG    N    + +G+   H
Sbjct: 19  HASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH 60


>sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204
           OS=Homo sapiens PE=2 SV=2
          Length = 223

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 182 HLHHGSLACSYSHAHA---GSHPHWYSRRNYCTRTRHPKSRTRTHCFSHAC 39
           H H  + A ++ H H     +H H ++  +Y TRT      T TH  +H+C
Sbjct: 116 HTHAHTHAHTHGHTHTRAHSTHAHTHAHSHYHTRTL-----TLTHSHAHSC 161



 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -3

Query: 185 PHLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSH-ACRTLACPQS 15
           PH    +   + SH H  +H H ++  +  T TR   +   TH  SH   RTL    S
Sbjct: 101 PHTQMHTRILTLSHMHTHAHTHAHTHGH--THTRAHSTHAHTHAHSHYHTRTLTLTHS 156


>sp|Q13393|PLD1_HUMAN Phospholipase D1 OS=Homo sapiens GN=PLD1 PE=1
           SV=1
          Length = 1074

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 10  MTLCGQARVRQAWEKQWVLVRD 75
           +  CGQ R    W K+W++V+D
Sbjct: 238 LNCCGQGRACYRWSKRWLIVKD 259


>sp|O08684|PLD1_CRIGR Phospholipase D1 OS=Cricetulus griseus GN=PLD1
           PE=2 SV=1
          Length = 1036

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 10  MTLCGQARVRQAWEKQWVLVRD 75
           +  CGQ R    W K+W++V+D
Sbjct: 238 LNCCGQGRACYRWSKRWLIVKD 259


>sp|Q6P3N9|ZNT7_XENTR Zinc transporter 7 OS=Xenopus tropicalis
           GN=slc30a7 PE=2 SV=1
          Length = 390

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 179 LHHGSLACSYSHAHAGSHPH 120
           L +GSL+  +SH+H GSH H
Sbjct: 179 LFNGSLSHGHSHSHGGSHGH 198


>sp|Q9M647|IAR1_ARATH IAA-alanine resistance protein 1
           OS=Arabidopsis thaliana GN=IAR1 PE=2 SV=3
          Length = 469

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 182 HLHHGSLACSYSHAHAGSHPH 120
           H+HH    CS+SH H   H H
Sbjct: 37  HVHHHGGGCSHSHDHDHDHDH 57
tr_hit_id Q0DWM5
Definition tr|Q0DWM5|Q0DWM5_ORYSJ Os02g0806600 protein (Fragment) OS=Oryza sativa subsp. japonica
Align length 38
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912779|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_G07.
         (190 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0DWM5|Q0DWM5_ORYSJ Os02g0806600 protein (Fragment) OS=Oryza ...    39   0.17 
tr|B4NIP3|B4NIP3_DROWI GK13504 OS=Drosophila willistoni GN=GK135...    37   0.65 
tr|B3MSA6|B3MSA6_DROAN GF20833 OS=Drosophila ananassae GN=GF2083...    36   0.85 
tr|Q5LD27|Q5LD27_BACFN Putative uncharacterized protein OS=Bacte...    34   3.2  
tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein OS=uncul...    34   3.2  
tr|A5APM8|A5APM8_VITVI Putative uncharacterized protein OS=Vitis...    34   3.2  
tr|B4NLH7|B4NLH7_DROWI GK18397 OS=Drosophila willistoni GN=GK183...    34   3.2  
tr|B3MPL0|B3MPL0_DROAN GF14138 OS=Drosophila ananassae GN=GF1413...    34   3.2  
tr|Q16Y19|Q16Y19_AEDAE Cation efflux protein/ zinc transporter (...    34   4.2  
tr|A8MYS4|A8MYS4_HUMAN Putative uncharacterized protein ENSP0000...    33   5.5  
tr|Q948G6|Q948G6_ORYSA Putative epsin OS=Oryza sativa GN=OSJNBa0...    33   7.2  
tr|Q6K8F1|Q6K8F1_ORYSJ cDNA clone:J013110A10, full insert sequen...    33   7.2  
tr|Q6K8F0|Q6K8F0_ORYSJ Epsin-like OS=Oryza sativa subsp. japonic...    33   7.2  
tr|A7Q9R4|A7Q9R4_VITVI Chromosome chr5 scaffold_67, whole genome...    33   7.2  
tr|A3ACG9|A3ACG9_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.2  
tr|A2XAR9|A2XAR9_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.2  
tr|B4M9D5|B4M9D5_DROVI GJ18296 OS=Drosophila virilis GN=GJ18296 ...    33   7.2  
tr|B4KHI6|B4KHI6_DROMO GI10908 OS=Drosophila mojavensis GN=GI109...    33   7.2  
tr|A8IXT1|A8IXT1_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   9.4  
tr|Q29NG9|Q29NG9_DROPS GA12069 OS=Drosophila pseudoobscura pseud...    33   9.4  
tr|B4JPK2|B4JPK2_DROGR GH13535 OS=Drosophila grimshawi GN=GH1353...    33   9.4  
tr|B4G7M3|B4G7M3_DROPE GL19186 OS=Drosophila persimilis GN=GL191...    33   9.4  
tr|A8NQX6|A8NQX6_BRUMA T-cell receptor beta chain ANA 11, putati...    33   9.4  
tr|A7TBG8|A7TBG8_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.4  
tr|A6NFT5|A6NFT5_HUMAN Putative uncharacterized protein ENSP0000...    33   9.4  
tr|A6NE69|A6NE69_HUMAN Putative uncharacterized protein ENSP0000...    33   9.4  

>tr|Q0DWM5|Q0DWM5_ORYSJ Os02g0806600 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os02g0806600 PE=4 SV=1
          Length = 142

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 35  YDRHGKSNGFWFGTWGGGCECNSSSCYTNGDGSQHEHG 148
           YD +G+S+G W     G CEC+ +S   NG    H HG
Sbjct: 23  YDHYGQSHGNWLRHRSGRCECHGTSSQPNGCKQGHWHG 60


>tr|B4NIP3|B4NIP3_DROWI GK13504 OS=Drosophila willistoni GN=GK13504
           PE=4 SV=1
          Length = 1031

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -3

Query: 188 QPHLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSHA 42
           Q H HH        HAHA +HPH +S  ++     HP      H  SH+
Sbjct: 814 QQHHHH--------HAHAHTHPHAHSHHHHRPHHHHPHPHPHPHAHSHS 854


>tr|B3MSA6|B3MSA6_DROAN GF20833 OS=Drosophila ananassae GN=GF20833
            PE=4 SV=1
          Length = 1979

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 182  HLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSHA 42
            H HH  +  S+ H+HA SHPH     ++     H  S   TH   HA
Sbjct: 981  HAHHSHVH-SHGHSHAHSHPHHAHAHSHAHGHAHSHSHAHTHPHQHA 1026


>tr|Q5LD27|Q5LD27_BACFN Putative uncharacterized protein
            OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
            GN=BF2290 PE=4 SV=1
          Length = 1667

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 41   RHGKSNGFWFGTWGGGCECNSSSCYTNGDGSQHEHGSRSKQGIHDADGV 187
            R G SNGF+  ++GGG     S+     +G Q    S S   IH A G+
Sbjct: 1388 RAGGSNGFYCESYGGGIHMTDSTWVRVYNGKQFYVSSTSSDAIHTAGGI 1436


>tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein
           OS=uncultured organism PE=4 SV=1
          Length = 140

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -3

Query: 182 HLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSHACR 36
           H H  +   + +H H  +H H ++  +  T T H  + T TH  +HA R
Sbjct: 53  HTHTHTHTHTPTHTHTHTHTHTHTHTHTHTHTTHTHTHTHTHTHTHAER 101


>tr|A5APM8|A5APM8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_044143 PE=4 SV=1
          Length = 817

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 33  STTGMGKAMXXXXXXXXXXXXXIVPPAIPM---GMAPSMSMGVGASKGSMMQMGL 188
           STT MGKAM             + PP   M   GM   M MG+G+  G+ M MG+
Sbjct: 657 STTTMGKAMGSGSGMGRAGAGALRPPPNTMMGSGMGMGMGMGMGSGPGAGMSMGM 711


>tr|B4NLH7|B4NLH7_DROWI GK18397 OS=Drosophila willistoni GN=GK18397
           PE=4 SV=1
          Length = 226

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 152 YSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSH 45
           + H H G+H HW  RR++   T  PK R R +  SH
Sbjct: 11  HEHEHGGAHYHWPPRRHW--STGEPKCRQRRYYLSH 44


>tr|B3MPL0|B3MPL0_DROAN GF14138 OS=Drosophila ananassae GN=GF14138
           PE=4 SV=1
          Length = 216

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 152 YSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSH 45
           + H H G+H HW  RR++   T  PK R R +  SH
Sbjct: 11  HEHEHVGAHYHWPPRRHW--STGEPKCRQRRYYLSH 44


>tr|Q16Y19|Q16Y19_AEDAE Cation efflux protein/ zinc transporter
           (Fragment) OS=Aedes aegypti GN=AAEL008693 PE=4 SV=1
          Length = 339

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -3

Query: 185 PHLHHGSLACSYSHAHAGSHPH--WYSRRNYCTRTRHPKSRTRTHCFSHACRTLACPQ 18
           PH+HHG     +SH H+ SH H    S+ N    +  P+S   +   S +     CP+
Sbjct: 132 PHMHHGHSHGGHSHGHSHSHAHSNTNSQANLVEASSTPRSTPLSRSRSGSPTKKPCPK 189


>tr|A8MYS4|A8MYS4_HUMAN Putative uncharacterized protein
           ENSP00000380660 (Fragment) OS=Homo sapiens PE=4 SV=1
          Length = 207

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -3

Query: 182 HLHHGSLACSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTH 57
           H H    +C++ HAH  +HPH ++R +  T   HP   T TH
Sbjct: 29  HTHIHPSSCTHKHAH--THPHGHTRTHAHT---HPHGHTHTH 65



 Score = 33.1 bits (74), Expect = 7.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 158 CSYSHAHAGSHPHWYSRRNYCTRTRHPKSRTRTHCFSHAC 39
           C+Y+H H  +H H        TR  HP   T TH    +C
Sbjct: 6   CAYTHPHGHTHVH--------TRIHHPHGHTHTHIHPSSC 37