BP912733
Clone id YMU001_000022_C05
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGAGTGTAGAGACTTTGAGTCTATGGAGGAGGTGTTTGACGAGTTTATTGAGGAATTCTC
ACAAATGGGGATAGCTCATAATACAGTCTCACAAATCCATGAATTCAAACAGAAAGAAGG
GGAATCTGTGCAAAAGACAGCCCTACGACTAAAAAGACATATTAAGTTCTGCCCTGTGGA
AGAACTATCAACTCAGTCCAAACTTATGCTTATATTTATCCAAGGAATAAGGAATGCAAA
TCTCCAGAAGGACTTACATATGAAGAGGAGCACAATGTTAAATTAGTTAACTAAGGAGGC
TCTTTACCTTGTAGACGATTGTACGGTCTACAAGGAGGGTGAATTCAAGGATCTTGACGA
TGATTCATCCTCACAACAAAGTGGAAGCAAGTCCGCTAAGACAGCACCAAAAGAAGAAGT
AGCTATAAGCCAGGAGCAGCTTGTAGAGGAAGTGTTAAAAAAGATTAACCTGTATGCCAA
ACCTTGAGCTAAACAGCCCAAGTGGTGTGCTATTGAGCAAAAATGGACAAACCATGGGAT
AGAGGAATGTTATTGTAGCAAGGGGTATGTGAGAGAACGACCTTATGCTCCCCAGGCTCA
GGTAGCATCTCCTCAACTTGAGTACCTGCAGGT
■■Homology search results ■■ -
sp_hit_id Q61644
Definition sp|Q61644|PACN1_MOUSE Protein kinase C and casein kinase substrate in neurons protein 1 OS=Mus musculus
Align length 97
Score (bit) 32.7
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912733|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_C05.
(633 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q61644|PACN1_MOUSE Protein kinase C and casein kinase substra... 33 1.6
sp|Q9Z0W5|PACN1_RAT Protein kinase C and casein kinase substrate... 32 2.1
sp|Q5R411|PACN1_PONAB Protein kinase C and casein kinase substra... 32 2.7
sp|Q9BY11|PACN1_HUMAN Protein kinase C and casein kinase substra... 32 2.7
sp|Q480H5|SYM_COLP3 Methionyl-tRNA synthetase OS=Colwellia psych... 30 7.9
sp|P09986|HLYDC_ECOLX Hemolysin secretion protein D, chromosomal... 30 7.9

>sp|Q61644|PACN1_MOUSE Protein kinase C and casein kinase substrate
in neurons protein 1 OS=Mus musculus GN=Pacsin1 PE=1
SV=1
Length = 441

Score = 32.7 bits (73), Expect = 1.6
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +2

Query: 2 ECR-DFESMEEVFDEFIEEFSQ-----MGIAHNTVSQIHEFKQKEGESVQKTALRLKRHI 163
+CR D + +E +++ +E+ + M Q +F++K +++ L +KRH+
Sbjct: 194 KCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHL 253

Query: 164 KFCPVEELSTQSKLMLIFIQGIRNANLQKDLHMKRST 274
E S+ + Q IR A+ Q+DL RST
Sbjct: 254 NLA---ENSSYMHVYRELEQAIRGADAQEDLRWFRST 287


>sp|Q9Z0W5|PACN1_RAT Protein kinase C and casein kinase substrate in
neurons protein 1 OS=Rattus norvegicus GN=Pacsin1 PE=1
SV=1
Length = 441

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +2

Query: 2 ECR-DFESMEEVFDEFIEEFSQ-----MGIAHNTVSQIHEFKQKEGESVQKTALRLKRHI 163
+CR D + +E +++ +E+ + M Q +F++K +++ L +KRH+
Sbjct: 194 KCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHL 253

Query: 164 KFCPVEELSTQSKLMLIFIQGIRNANLQKDLHMKRST 274
E S+ + Q IR A+ Q+DL RST
Sbjct: 254 NLA---ENSSYIHVYRELEQAIRGADAQEDLRWFRST 287


>sp|Q5R411|PACN1_PONAB Protein kinase C and casein kinase substrate
in neurons protein 1 OS=Pongo abelii GN=Pacsin1 PE=2
SV=1
Length = 444

Score = 32.0 bits (71), Expect = 2.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +2

Query: 8 RDFESMEEVFDEFIEEFSQ-----MGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFC 172
+D + +E +++ +E+ + M Q +F++K +++ L +KRH+
Sbjct: 200 QDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLA 259

Query: 173 PVEELSTQSKLMLIFIQGIRNANLQKDLHMKRST 274
E S+ + Q IR A+ Q+DL RST
Sbjct: 260 ---ENSSYIHVYRELEQAIRGADAQEDLRWFRST 290


>sp|Q9BY11|PACN1_HUMAN Protein kinase C and casein kinase substrate
in neurons protein 1 OS=Homo sapiens GN=PACSIN1 PE=1
SV=1
Length = 444

Score = 32.0 bits (71), Expect = 2.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +2

Query: 8 RDFESMEEVFDEFIEEFSQ-----MGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFC 172
+D + +E +++ +E+ + M Q +F++K +++ L +KRH+
Sbjct: 200 QDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLA 259

Query: 173 PVEELSTQSKLMLIFIQGIRNANLQKDLHMKRST 274
E S+ + Q IR A+ Q+DL RST
Sbjct: 260 ---ENSSYIHVYRELEQAIRGADAQEDLRWFRST 290


>sp|Q480H5|SYM_COLP3 Methionyl-tRNA synthetase OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=metG PE=3
SV=1
Length = 713

Score = 30.4 bits (67), Expect = 7.9
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2

Query: 17 ESMEEVFDEFIEEFSQMGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFCPVEELSTQ 196
E + V +E I+EFS I+ + H + KE AL K HIK + +L
Sbjct: 88 EMINGVREERIKEFSDFHISFDNYHTTHSDENKEYSEKIYNALHAKGHIKTRIISQLYDP 147

Query: 197 SKLMLI---FIQG 226
K M + F++G
Sbjct: 148 EKGMFLADRFVKG 160


>sp|P09986|HLYDC_ECOLX Hemolysin secretion protein D, chromosomal
OS=Escherichia coli GN=hlyD PE=1 SV=1
Length = 478

Score = 30.4 bits (67), Expect = 7.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2

Query: 89 SQIHEFKQKEGESVQKTALRLKRHIKFCPVEELSTQSKLMLIFIQGIRNANLQKDLHMKR 268
S + E KEGESV+K + LK + L TQS L+ ++ IR L + + + +
Sbjct: 105 SIVKEIIVKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNK 164


tr_hit_id A0CLP5
Definition tr|A0CLP5|A0CLP5_PARTE Chromosome undetermined scaffold_20, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 92
Score (bit) 37.4
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912733|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_C05.
(633 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0CLP5|A0CLP5_PARTE Chromosome undetermined scaffold_20, whol... 37 0.76
tr|B4W7X8|B4W7X8_9CAUL Translation elongation factor Ts OS=Brevu... 35 2.9
tr|A4VC99|A4VC99_9LACT Transposase AB of ISLL6 OS=Lactococcus la... 35 4.9
tr|Q17C75|Q17C75_AEDAE Putative uncharacterized protein OS=Aedes... 35 4.9
tr|A0CZZ3|A0CZZ3_PARTE Chromosome undetermined scaffold_32, whol... 34 6.4
tr|A2F841|A2F841_TRIVA Putative uncharacterized protein OS=Trich... 34 8.3
tr|Q38C57|Q38C57_9TRYP Putative uncharacterized protein OS=Trypa... 34 8.4

>tr|A0CLP5|A0CLP5_PARTE Chromosome undetermined scaffold_20, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00008261001 PE=4 SV=1
Length = 584

Score = 37.4 bits (85), Expect = 0.76
Identities = 21/92 (22%), Positives = 44/92 (47%)
Frame = +2

Query: 5 CRDFESMEEVFDEFIEEFSQMGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFCPVEE 184
C DFE + F+E+I+E + + ++Q+ + +QKE +Q+ LK + CP
Sbjct: 222 CCDFEEVFNKFEEYIKEIEKCKQSIEDLNQVVQNQQKEIAKLQQKNQTLKSQLLSCPPTA 281

Query: 185 LSTQSKLMLIFIQGIRNANLQKDLHMKRSTML 280
S + + I ++ + ++L K ++
Sbjct: 282 RSIEPEQQQILVKDPKEQKTIENLKAKNQKLI 313


>tr|B4W7X8|B4W7X8_9CAUL Translation elongation factor Ts
OS=Brevundimonas sp. BAL3 GN=BBAL3_1416 PE=4 SV=1
Length = 313

Score = 35.4 bits (80), Expect = 2.9
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2

Query: 11 DFESMEEVFDEFIEEFSQMGIAHNTVSQIHEFKQKEGESVQ 133
DF + E+F + F+Q+G+ H+TV +H + + G++VQ
Sbjct: 85 DFVARNELFQNAAKSFAQLGLEHHTVEALHGAELEAGKTVQ 125


>tr|A4VC99|A4VC99_9LACT Transposase AB of ISLL6 OS=Lactococcus
lactis GN=tnpA2B2-ISLL6 PE=4 SV=1
Length = 379

Score = 34.7 bits (78), Expect = 4.9
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +2

Query: 5 CRDFESMEEVFDEFIEEFSQMGIAHNTV---SQIHEFKQKEGESVQKTALRLKR-HIKFC 172
C+D+ + F ++I++FSQ+ + NTV QI E +++ + K+ L+ HI
Sbjct: 29 CKDYGVSQTAFSKWIKQFSQVKLEDNTVMTAKQIQELQKRNAQRRGKSDLKKSECHI--- 85

Query: 173 PVEELSTQSKLMLIFIQGIRNAN--LQKDLHMKRSTMLN*LTK 295
Q +L I+ + L + LH+ RST N + K
Sbjct: 86 ---HAKLQVRLKAIYRLRFEHTTVMLCRVLHVNRSTYYNFINK 125


>tr|Q17C75|Q17C75_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL004656 PE=4 SV=1
Length = 247

Score = 34.7 bits (78), Expect = 4.9
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2

Query: 23 MEEVFDEFIEEFSQMGIAH-NTVSQIHEF---KQKEGESVQKTALRLKRHIKFCPVEELS 190
+ + + + +E+F + + N ++ H KQ+EGES+ A+ L+ ++ C V +
Sbjct: 79 VNKTYAQIVEKFKILHEENKNVFAERHRLITRKQEEGESLDDFAIDLQNIVEHCSVSAET 138

Query: 191 TQSKLMLIFIQGIRNANLQKDLHMKRSTMLN 283
+ + +F+ GIRN ++ + LN
Sbjct: 139 EATLVQSVFVAGIRNDKTRESMLRDADHSLN 169


>tr|A0CZZ3|A0CZZ3_PARTE Chromosome undetermined scaffold_32, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00011934001 PE=4 SV=1
Length = 577

Score = 34.3 bits (77), Expect = 6.4
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Frame = +2

Query: 5 CRDFESMEEVFDEFIEEFSQMGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFCPVEE 184
C DFE + F E+I+E ++ + + +QKE VQ+ LK + CP
Sbjct: 222 CGDFEEVHNKFQEYIKEIENNKQIIEDMNYLVQNQQKEIAKVQQKNQSLKSQLLSCPPTA 281

Query: 185 LSTQSKLMLIF----------------IQGIRNANLQKDLHMKRSTMLN*LT--KEALY 307
S + + I IQGI+ N Q+ L MK++ + LT + +LY
Sbjct: 282 RSIEPEQQQIIIKDPQELKTIESLKAQIQGIKEEN-QRILGMKQAQYESQLTALRRSLY 339


>tr|A2F841|A2F841_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_242820 PE=4 SV=1
Length = 199

Score = 33.9 bits (76), Expect = 8.3
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2

Query: 11 DFESMEEVFDEFIEEFSQMGIAHNTVSQIHEFKQKEGESVQKTALRLKRHIKFCPVEELS 190
+FE++E +FD+ +E + NT+ Q E +E + +++++ K P+EE+
Sbjct: 122 EFENVESLFDDVEKELQNRILQQNTMKQEIELHAQERDFYLSKLMQIEKLTKKYPIEEVG 181

Query: 191 T 193
T
Sbjct: 182 T 182


>tr|Q38C57|Q38C57_9TRYP Putative uncharacterized protein
OS=Trypanosoma brucei GN=Tb10.70.5990 PE=4 SV=1
Length = 433

Score = 33.9 bits (76), Expect = 8.4
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1

Query: 528 VHFCSIAHHLGCLAQG---LAYRLIFFNTSSTSCSWLIATSSFGAVLADLLPLCCE 370
VHF LGC+AQG L RL TSS + + F D P+CCE
Sbjct: 231 VHFVRWVPSLGCVAQGGEDLTVRLWDVRTSSDGMKAIDLSLGFTMACIDYHPICCE 286