BP912601
Clone id YMU001_000020_G08
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGGGCAACTTTCCCCACTACCTTTTCTTATCCTTGGACAGTTTCTTCTTCCTCTTCTTTA
CGGCCTTGGGCGTCTTTGTCTTTCTAGCTTCCCTCCTTTCCTCCTTCACTTTCTTCTTAT
GTGCTTTGCGAGCATCCCTGGAATCTCCCTTTGAGACGTTGCCAGCAGTATCTTCGGTAC
TTGCATCAGAATCACTATCACCTGATTCATCAGGACTTGGCTTTTCTCCAGCCTTGTCAA
ATTGACCTTCCACATTAGGTTCATCATCAGCCTGATCATTGGCTTTGACTGGAAGAAAGA
GCAGGTTATTGCTTGGTTGAGGGGCTTCCTCCAGAATAGACGGCACAAGCCGAACACCTG
AAAGATCCTCTTTAAGCCCAATTATTGTCTGGTAGTAGATGCCCTCAGTATCCTTCCCAC
TTGAAATCCGTTGCATGTCTCTTTCGTAGTCCTTCACTTGATCCAGAGTCCTCGGTATG
■■Homology search results ■■ -
sp_hit_id Q9BRS2
Definition sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo sapiens
Align length 58
Score (bit) 56.6
E-value 6.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912601|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G08.
(479 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Ho... 57 6e-08
sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mu... 54 3e-07
sp|P74745|SPKC_SYNY3 Serine/threonine-protein kinase C OS=Synech... 31 3.3
sp|Q6PGQ1|YV013_HUMAN Putative uncharacterized protein LOC51233 ... 30 5.6
sp|Q569Z1|EIF3B_XENLA Eukaryotic translation initiation factor 3... 29 9.6

>sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo
sapiens GN=RIOK1 PE=1 SV=2
Length = 568

Score = 56.6 bits (135), Expect = 6e-08
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTE--------GIYYQTIIGLKEDLSGVRLVPSILE 329
IPRTL++VK+YERDM I K+ + I YQT+ GLK+DLSGV+ VP++LE
Sbjct: 430 IPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLE 487


>sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mus
musculus GN=Riok1 PE=2 SV=2
Length = 567

Score = 54.3 bits (129), Expect = 3e-07
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 8/58 (13%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTE--------GIYYQTIIGLKEDLSGVRLVPSILE 329
IPRTL++VK+YERD+ + K+ + I YQT++GLK+DLSGV+ VP++LE
Sbjct: 429 IPRTLNEVKNYERDVDIMMRLKEEDMALNTQQDNILYQTVMGLKKDLSGVQKVPALLE 486


>sp|P74745|SPKC_SYNY3 Serine/threonine-protein kinase C
OS=Synechocystis sp. (strain PCC 6803) GN=spkC PE=1 SV=1
Length = 535

Score = 30.8 bits (68), Expect = 3.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2

Query: 346 VPSILEEAPQPSNNLLFLPVKANDQADDEPNV 251
VP + PQPSN + +P N A+ EPN+
Sbjct: 489 VPPQISPTPQPSNTVPVIPPPENPSAETEPNL 520


>sp|Q6PGQ1|YV013_HUMAN Putative uncharacterized protein LOC51233
OS=Homo sapiens PE=2 SV=1
Length = 229

Score = 30.0 bits (66), Expect = 5.6
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = -2

Query: 475 PRTLDQVKDYERDMQRISSGKDTEG-----IYYQTIIGLKEDLSGVRLVPSILEEAPQPS 311
P LD +D+Q IS+ K G + + + +ED +++PS ++ + + +
Sbjct: 46 PGKLDVGATEGQDLQHISNQKMPTGPPEDRLSLKFLPSSEEDNDDAKILPSPVQGSSEDN 105

Query: 310 NNLLFLPVKANDQADDEPNVEGQ 242
+L+ LP +D DD+ + + Q
Sbjct: 106 LSLVCLPRSEDDDCDDDDDDDAQ 128


>sp|Q569Z1|EIF3B_XENLA Eukaryotic translation initiation factor 3
subunit B OS=Xenopus laevis GN=eif3b PE=2 SV=1
Length = 688

Score = 29.3 bits (64), Expect = 9.6
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = -2

Query: 454 KDYERDMQRISSGKDTEGIYYQTIIGLKEDLSGVRLVPSILEEAPQPSNNL 302
+D E + + + ++ EG+ + G ++D+S L+ IL++ PQ ++ +
Sbjct: 9 RDMEEEGEESNEEEEEEGMSFSDPEGFEDDISDEELLGDILKDRPQEADGI 59


tr_hit_id A9T9Z4
Definition tr|A9T9Z4|A9T9Z4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 82
Score (bit) 77.8
E-value 2.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912601|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G08.
(479 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T9Z4|A9T9Z4_PHYPA Predicted protein OS=Physcomitrella paten... 78 2e-13
tr|Q00WH3|Q00WH3_OSTTA RIO kinase (ISS) OS=Ostreococcus tauri GN... 60 7e-08
tr|Q7ZV65|Q7ZV65_DANRE RIO kinase 1 (Yeast) OS=Danio rerio GN=ri... 59 9e-08
tr|B0UXW2|B0UXW2_DANRE RIO kinase 1 (Yeast) OS=Danio rerio GN=ri... 59 9e-08
tr|B3S269|B3S269_TRIAD Putative uncharacterized protein OS=Trich... 59 9e-08
tr|A4SAN8|A4SAN8_OSTLU Predicted protein (Fragment) OS=Ostreococ... 59 1e-07
tr|B1H1X7|B1H1X7_XENLA LOC733148 protein OS=Xenopus laevis GN=ri... 58 2e-07
tr|Q75XU7|Q75XU7_TOBAC RIO kinase OS=Nicotiana tabacum GN=NtRIO ... 57 5e-07
tr|Q9H2L9|Q9H2L9_HUMAN AD034 OS=Homo sapiens PE=2 SV=1 57 6e-07
tr|Q5W0K5|Q5W0K5_HUMAN RIO kinase 1 (Yeast) OS=Homo sapiens GN=R... 57 6e-07
tr|B2RB28|B2RB28_HUMAN cDNA, FLJ95270, Homo sapiens RIO kinase 1... 57 6e-07
tr|Q6AY66|Q6AY66_RAT Riok1 protein (Fragment) OS=Rattus norvegic... 56 8e-07
tr|Q5HZ82|Q5HZ82_XENLA LOC733148 protein (Fragment) OS=Xenopus l... 56 1e-06
tr|B6MSR3|B6MSR3_BRAFL Putative uncharacterized protein OS=Branc... 54 3e-06
tr|B6P9B3|B6P9B3_BRAFL Putative uncharacterized protein OS=Branc... 54 5e-06
tr|Q4TA02|Q4TA02_TETNG Chromosome undetermined SCAF7478, whole g... 51 3e-05
tr|Q2HRF6|Q2HRF6_MEDTR Tyrosine protein kinase, active site OS=M... 51 3e-05
tr|A7PHH4|A7PHH4_VITVI Chromosome chr17 scaffold_16, whole genom... 50 4e-05
tr|B7Q157|B7Q157_IXOSC RIO kinase, putative (Fragment) OS=Ixodes... 49 1e-04
tr|Q5R4T4|Q5R4T4_PONAB Putative uncharacterized protein DKFZp459... 49 2e-04
tr|Q54VD8|Q54VD8_DICDI Putative uncharacterized protein rio1 OS=... 47 6e-04
tr|Q9SK34|Q9SK34_ARATH Similar to extragenic suppressor of bimD6... 45 0.001
tr|Q9FHT0|Q9FHT0_ARATH SUDD-like protein (Putative uncharacteriz... 45 0.002
tr|Q8W4A1|Q8W4A1_ARATH SUDD-like protein (Fragment) OS=Arabidops... 45 0.002
tr|Q8L9X8|Q8L9X8_ARATH Similar to extragenic suppressor of bimD6... 45 0.002
tr|Q67YW7|Q67YW7_ARATH Putative uncharacterized protein At5g3735... 45 0.002
tr|Q3E8M0|Q3E8M0_ARATH Uncharacterized protein At5g37350.2 OS=Ar... 45 0.002
tr|A9USV6|A9USV6_MONBE Predicted protein (Fragment) OS=Monosiga ... 44 0.004
tr|B3M4A3|B3M4A3_DROAN GF24528 OS=Drosophila ananassae GN=GF2452... 38 0.29
tr|Q4X0B1|Q4X0B1_ASPFU Extragenic suppressor of the bimD6 mutati... 38 0.29

>tr|A9T9Z4|A9T9Z4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_142435 PE=4 SV=1
Length = 448

Score = 77.8 bits (190), Expect = 2e-13
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTEGIYYQTIIGLKEDLSGVRLVPSILEEAPQPSNNLL 299
IP++LDQV+DYERD +R+ SG+DTEGIYYQTI GLKEDLSGVRL + A + +
Sbjct: 305 IPKSLDQVEDYERDQERMKSGQDTEGIYYQTITGLKEDLSGVRLSSDNVARA-EDVKKVS 363

Query: 298 FLPVKANDQADDEPNVEGQFDK 233
V ++D D E E D+
Sbjct: 364 ASEVVSDDGGDGELTTENTDDE 385


>tr|Q00WH3|Q00WH3_OSTTA RIO kinase (ISS) OS=Ostreococcus tauri
GN=Ot14g00390 PE=4 SV=1
Length = 424

Score = 59.7 bits (143), Expect = 7e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGK-DTEGIYYQTIIGLKEDLSGVRLVPSILEE 326
IPR LD+V +ERD +R+ G ++EGIYYQTI G+ +DLSGVR P ++ +
Sbjct: 370 IPRALDEVDTFERDQRRLKQGDGESEGIYYQTITGMADDLSGVRTTPMLISK 421


>tr|Q7ZV65|Q7ZV65_DANRE RIO kinase 1 (Yeast) OS=Danio rerio GN=riok1
PE=2 SV=1
Length = 552

Score = 59.3 bits (142), Expect = 9e-08
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKD--------TEGIYYQTIIGLKEDLSGVRLVPSILEEA 323
IPRTL++V YERD+ + K+ T+ I YQT+ GL++DLSGV+ VPSILE++
Sbjct: 426 IPRTLNEVTHYERDVDTMMKKKEDTSSEDTNTDNILYQTVTGLRKDLSGVQTVPSILEDS 485

Query: 322 PQPSNNLLFLPVKANDQADDEPNVEGQFDKAGEK 221
+ ++ +++ +DE + E K+GE+
Sbjct: 486 TKDESS-------GSEEEEDEDDEE----KSGEE 508


>tr|B0UXW2|B0UXW2_DANRE RIO kinase 1 (Yeast) OS=Danio rerio GN=riok1
PE=4 SV=1
Length = 552

Score = 59.3 bits (142), Expect = 9e-08
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKD--------TEGIYYQTIIGLKEDLSGVRLVPSILEEA 323
IPRTL++V YERD+ + K+ T+ I YQT+ GL++DLSGV+ VPSILE++
Sbjct: 426 IPRTLNEVTHYERDVDTMMKKKEDTSSEDTNTDNILYQTVTGLRKDLSGVQTVPSILEDS 485

Query: 322 PQPSNNLLFLPVKANDQADDEPNVEGQFDKAGEK 221
+ ++ +++ +DE + E K+GE+
Sbjct: 486 TKDESS-------GSEEEEDEDDEE----KSGEE 508


>tr|B3S269|B3S269_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_57946 PE=4 SV=1
Length = 487

Score = 59.3 bits (142), Expect = 9e-08
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTEGIYYQTIIGLKEDLSGVRLVPSILEEAPQPSNNLL 299
IP LD+V D+E D+ ++ SG DTE I+YQTI GL++DLSG PSIL E ++
Sbjct: 357 IPNRLDEVADFESDIMKVQSG-DTEDIHYQTITGLRKDLSGPSQEPSILTEQAIEDDSED 415

Query: 298 FLPVKANDQADDE 260
+++D +D E
Sbjct: 416 SSSTESSDDSDTE 428


>tr|A4SAN8|A4SAN8_OSTLU Predicted protein (Fragment) OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_2858 PE=4 SV=1
Length = 375

Score = 58.9 bits (141), Expect = 1e-07
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGK-DTEGIYYQTIIGLKEDLSGVRLVPSIL 332
IPR LD+V +ERD +R+ GK ++EGIYYQTI G+ +DLS VR P++L
Sbjct: 309 IPRALDEVDLFERDQKRLIQGKGESEGIYYQTITGMADDLSSVRTTPTLL 358


>tr|B1H1X7|B1H1X7_XENLA LOC733148 protein OS=Xenopus laevis GN=riok1
PE=2 SV=1
Length = 542

Score = 58.2 bits (139), Expect = 2e-07
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTE--------GIYYQTIIGLKEDLSGVRLVPSILEEA 323
IPRTL++VK++ERD+ + K+ + I YQT+ GLK+DLSG VP++L
Sbjct: 402 IPRTLNEVKNFERDVDTMQKLKEEDMSLNTQQDNILYQTVTGLKKDLSGAETVPALL--- 458

Query: 322 PQPSNNLLFLPVKANDQADDEPNVEGQFDKAGE 224
Q SNN L +D DD+ N +G D A +
Sbjct: 459 -QNSNNEDQL---GSDSDDDDDNDDGAKDSASD 487


>tr|Q75XU7|Q75XU7_TOBAC RIO kinase OS=Nicotiana tabacum GN=NtRIO
PE=2 SV=1
Length = 562

Score = 57.0 bits (136), Expect = 5e-07
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTEGIYYQTIIGLKEDLSG 356
IP+TLD VKD E D+QRI SG+DT +YY+TI GLK+ LSG
Sbjct: 421 IPKTLDHVKDAEADVQRIISGEDTGDMYYKTITGLKQALSG 461


>tr|Q9H2L9|Q9H2L9_HUMAN AD034 OS=Homo sapiens PE=2 SV=1
Length = 327

Score = 56.6 bits (135), Expect = 6e-07
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTE--------GIYYQTIIGLKEDLSGVRLVPSILE 329
IPRTL++VK+YERDM I K+ + I YQT+ GLK+DLSGV+ VP++LE
Sbjct: 189 IPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLE 246


>tr|Q5W0K5|Q5W0K5_HUMAN RIO kinase 1 (Yeast) OS=Homo sapiens
GN=RIOK1 PE=2 SV=1
Length = 561

Score = 56.6 bits (135), Expect = 6e-07
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
Frame = -2

Query: 478 IPRTLDQVKDYERDMQRISSGKDTE--------GIYYQTIIGLKEDLSGVRLVPSILE 329
IPRTL++VK+YERDM I K+ + I YQT+ GLK+DLSGV+ VP++LE
Sbjct: 423 IPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLE 480