BP912596 |
Clone id |
YMU001_000020_G03 |
Library |
YMU01 |
Length |
425 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_G03. |
Accession |
BP912596 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1745Contig1 |
Sequence |
CTTGTCACAGCCAATCCACGTATCTGACAAGCAGAAGGAAGTCAAATTATAGTTCCCCTC AGCAGGTGCTTGGAATTTCACCACCGATAGCCTAGAACCAGACCGTACTTTAGCAACCGC TTCCTTCACAGCCTTGTTAACTTCTGTGTCACTAGCTCCCGTGCCTTCCATGGCTTCTTG TAGGGACTTTGAGGCAGCCAAAATAGCAGCCGACTCATCCAAAAATGAGACGCGTTGTGA TACCCAAATGAAGTTCTTGCTCGTGTCTGCCAGTAATAGCCAATACGTTTCATCCTTGTG ATATGGGAAATGGGGTGCATGTGGATGCCCCAGAATGAGCCCATTGCCTCGTTTGAGAGA CACCCACGCTTTCATGGTCACAATGTCACCCTCTTGAATTCCTTCCTCTCCTTCAGTTTC ACATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O75643 |
Definition |
sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens |
Align length |
112 |
Score (bit) |
33.5 |
E-value |
0.36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIY0 |
Definition |
tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
141 |
Score (bit) |
203.0 |
E-value |
3.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912596|Adiantum capillus-veneris mRNA, clone: YMU001_000020_G03. (425 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella paten... 203 3e-51 tr|Q9SSD9|Q9SSD9_ARATH F18B13.2 protein OS=Arabidopsis thaliana ... 192 5e-48 tr|Q9CA96|Q9CA96_ARATH Putative DnaJ protein; 34157-30943 OS=Ara... 192 5e-48 tr|Q0WT48|Q0WT48_ARATH Putative DnaJ protein OS=Arabidopsis thal... 192 5e-48 tr|Q0WL47|Q0WL47_ARATH Putative DnaJ protein OS=Arabidopsis thal... 192 5e-48 tr|A7QG99|A7QG99_VITVI Chromosome undetermined scaffold_91, whol... 188 1e-46 tr|Q7XVN7|Q7XVN7_ORYSJ Os04g0307200 protein OS=Oryza sativa subs... 186 5e-46 tr|Q01MF9|Q01MF9_ORYSA OSIGBa0125J07.5 protein OS=Oryza sativa G... 186 5e-46 tr|A2XRR9|A2XRR9_ORYSI Putative uncharacterized protein OS=Oryza... 186 5e-46 tr|A9P7Y5|A9P7Y5_POPTR Putative uncharacterized protein OS=Popul... 185 8e-46 tr|Q949Z5|Q949Z5_ARATH Putative uncharacterized protein At4g2118... 171 2e-41 tr|O49559|O49559_ARATH Putative uncharacterized protein AT4g2118... 171 2e-41 tr|A9UYS5|A9UYS5_MONBE Predicted protein OS=Monosiga brevicollis... 49 9e-05 tr|A0BQ90|A0BQ90_PARTE Chromosome undetermined scaffold_120, who... 48 3e-04 tr|B5YNG2|B5YNG2_THAPS RNA or DNA helicase OS=Thalassiosira pseu... 45 0.001 tr|B7G2L8|B7G2L8_PHATR Predicted protein OS=Phaeodactylum tricor... 44 0.004 tr|Q4N500|Q4N500_THEPA Sec63 protein, putative OS=Theileria parv... 43 0.007 tr|A0BKV6|A0BKV6_PARTE Chromosome undetermined scaffold_113, who... 43 0.009 tr|A8JI25|A8JI25_CHLRE RNA helicase, activating signal cointegra... 42 0.015 tr|Q4UEJ6|Q4UEJ6_THEAN DNAJ-like sec63 homologue, putative OS=Th... 42 0.020 tr|B7FXR6|B7FXR6_PHATR Predicted protein OS=Phaeodactylum tricor... 40 0.044 tr|Q0E4P2|Q0E4P2_ORYSJ Os02g0107000 protein (Fragment) OS=Oryza ... 40 0.075 tr|A3A293|A3A293_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.075 tr|A2WZV9|A2WZV9_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.075 tr|Q9FNQ1|Q9FNQ1_ARATH RNA helicase OS=Arabidopsis thaliana PE=4... 39 0.097 tr|Q8RY91|Q8RY91_ARATH Putative RNA helicase (Fragment) OS=Arabi... 39 0.097 tr|A7QM75|A7QM75_VITVI Chromosome chr5 scaffold_124, whole genom... 39 0.13 tr|A5BZG5|A5BZG5_VITVI Putative uncharacterized protein OS=Vitis... 39 0.13 tr|A7PDB5|A7PDB5_VITVI Chromosome chr17 scaffold_12, whole genom... 39 0.17 tr|A5BGX4|A5BGX4_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17
>tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170320 PE=4 SV=1 Length = 697
Score = 203 bits (517), Expect = 3e-51 Identities = 94/141 (66%), Positives = 114/141 (80%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEG+Q GDIVT+KAW++L R NGL+ HPHAPHFPY KDE YWLLLADT N +W Sbjct: 463 CETEGEEGVQAGDIVTLKAWITLHRPNGLVNCHPHAPHFPYFKDEHYWLLLADTQANSVW 522
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 VSQR++F DE+AA+ A++K++QE++EGTGA D EV+ V+SGSRL V KFQAP Sbjct: 523 VSQRITFTDEAAALSASAKTIQESLEGTGADDAEVSKAVREAVEKVKSGSRLVVAKFQAP 582
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEG YNLT+FCLSDTWIG D+ Sbjct: 583 AEGIYNLTAFCLSDTWIGVDR 603
>tr|Q9SSD9|Q9SSD9_ARATH F18B13.2 protein OS=Arabidopsis thaliana GN=F18B13.2 PE=4 SV=1 Length = 719
Score = 192 bits (489), Expect = 5e-48 Identities = 91/141 (64%), Positives = 108/141 (76%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT++AWV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W Sbjct: 490 CETEGEEGIQEGDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVW 549
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ+VSFLDE AI AASK++ E+MEG+GA E N V+ GSRL + K QAP Sbjct: 550 FSQKVSFLDEGGAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAP 609
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEG YNLT FCL DTWIGCDK Sbjct: 610 AEGTYNLTCFCLCDTWIGCDK 630
>tr|Q9CA96|Q9CA96_ARATH Putative DnaJ protein; 34157-30943 OS=Arabidopsis thaliana GN=At1g79940 PE=4 SV=1 Length = 702
Score = 192 bits (489), Expect = 5e-48 Identities = 91/141 (64%), Positives = 108/141 (76%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT++AWV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W Sbjct: 473 CETEGEEGIQEGDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVW 532
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ+VSFLDE AI AASK++ E+MEG+GA E N V+ GSRL + K QAP Sbjct: 533 FSQKVSFLDEGGAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAP 592
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEG YNLT FCL DTWIGCDK Sbjct: 593 AEGTYNLTCFCLCDTWIGCDK 613
>tr|Q0WT48|Q0WT48_ARATH Putative DnaJ protein OS=Arabidopsis thaliana GN=At1g79940 PE=2 SV=1 Length = 687
Score = 192 bits (489), Expect = 5e-48 Identities = 91/141 (64%), Positives = 108/141 (76%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT++AWV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W Sbjct: 458 CETEGEEGIQEGDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ+VSFLDE AI AASK++ E+MEG+GA E N V+ GSRL + K QAP Sbjct: 518 FSQKVSFLDEGGAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEG YNLT FCL DTWIGCDK Sbjct: 578 AEGTYNLTCFCLCDTWIGCDK 598
>tr|Q0WL47|Q0WL47_ARATH Putative DnaJ protein OS=Arabidopsis thaliana GN=At1g79940 PE=2 SV=1 Length = 463
Score = 192 bits (489), Expect = 5e-48 Identities = 91/141 (64%), Positives = 108/141 (76%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT++AWV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W Sbjct: 234 CETEGEEGIQEGDIVTLQAWVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVW 293
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ+VSFLDE AI AASK++ E+MEG+GA E N V+ GSRL + K QAP Sbjct: 294 FSQKVSFLDEGGAITAASKAISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAP 353
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEG YNLT FCL DTWIGCDK Sbjct: 354 AEGTYNLTCFCLCDTWIGCDK 374
>tr|A7QG99|A7QG99_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037758001 PE=4 SV=1 Length = 688
Score = 188 bits (478), Expect = 1e-46 Identities = 88/141 (62%), Positives = 111/141 (78%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT++AWV+LKR NGLI PHAP+FP+HK+E +W LLAD N +W Sbjct: 458 CETEGEEGIQEGDIVTVQAWVTLKRTNGLIGALPHAPYFPFHKEENFWFLLADPVSNNVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ++SF+DE+AAI AASK++++ MEG+GAS E + V++GSRL + K QAP Sbjct: 518 FSQKMSFMDEAAAITAASKAIEDTMEGSGASVKETSAAVREAVDKVKAGSRLVMGKLQAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEGNYNL+ FCL D+WIGCDK Sbjct: 578 AEGNYNLSCFCLCDSWIGCDK 598
>tr|Q7XVN7|Q7XVN7_ORYSJ Os04g0307200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0023J03.11 PE=4 SV=2 Length = 681
Score = 186 bits (472), Expect = 5e-46 Identities = 88/140 (62%), Positives = 104/140 (74%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGD+VTM AWVSL R NGL PHAP FP+HK+E +WLLLAD + N +W Sbjct: 458 CETEGEEGIQEGDVVTMYAWVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 +SQ+VSF+DE+ AI AASK++QE E GAS E+ V+ GSRL + KFQAP Sbjct: 518 LSQKVSFMDETTAITAASKAIQETQEALGASAKEIGIAIREAVDRVKKGSRLVMGKFQAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCD 4 AEG +NLTSFCL D WIGCD Sbjct: 578 AEGTHNLTSFCLCDAWIGCD 597
>tr|Q01MF9|Q01MF9_ORYSA OSIGBa0125J07.5 protein OS=Oryza sativa GN=OSIGBa0125J07.5 PE=4 SV=1 Length = 681
Score = 186 bits (472), Expect = 5e-46 Identities = 88/140 (62%), Positives = 104/140 (74%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGD+VTM AWVSL R NGL PHAP FP+HK+E +WLLLAD + N +W Sbjct: 458 CETEGEEGIQEGDVVTMYAWVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 +SQ+VSF+DE+ AI AASK++QE E GAS E+ V+ GSRL + KFQAP Sbjct: 518 LSQKVSFMDETTAITAASKAIQETQEALGASAKEIGIAIREAVDRVKKGSRLVMGKFQAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCD 4 AEG +NLTSFCL D WIGCD Sbjct: 578 AEGTHNLTSFCLCDAWIGCD 597
>tr|A2XRR9|A2XRR9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15323 PE=4 SV=1 Length = 681
Score = 186 bits (472), Expect = 5e-46 Identities = 88/140 (62%), Positives = 104/140 (74%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGD+VTM AWVSL R NGL PHAP FP+HK+E +WLLLAD + N +W Sbjct: 458 CETEGEEGIQEGDVVTMYAWVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 +SQ+VSF+DE+ AI AASK++QE E GAS E+ V+ GSRL + KFQAP Sbjct: 518 LSQKVSFMDETTAITAASKAIQETQEALGASAKEIGIAVREAVDRVKKGSRLVMGKFQAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCD 4 AEG +NLTSFCL D WIGCD Sbjct: 578 AEGTHNLTSFCLCDAWIGCD 597
>tr|A9P7Y5|A9P7Y5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 685
Score = 185 bits (470), Expect = 8e-46 Identities = 85/141 (60%), Positives = 107/141 (75%) Frame = -3
Query: 423 CETEGEEGIQEGDIVTMKAWVSLKRGNGLILGHPHAPHFPYHKDETYWLLLADTSKNFIW 244 CETEGEEGIQEGDIVT+ AW++LKR NGL+ PHAP FP+HK+E +W LLAD + N +W Sbjct: 458 CETEGEEGIQEGDIVTVHAWITLKRANGLVGALPHAPSFPFHKEENFWFLLADAASNDVW 517
Query: 243 VSQRVSFLDESAAILAASKSLQEAMEGTGASDTEVNXXXXXXXXXVRSGSRLSVVKFQAP 64 SQ+V+F+DE+AAI ASK++++ MEG+GAS E + VR GSRL + K AP Sbjct: 518 FSQKVNFMDEAAAITGASKTIEDTMEGSGASVRETSAAVREAVEKVRGGSRLVMGKLPAP 577
Query: 63 AEGNYNLTSFCLSDTWIGCDK 1 AEGNYNLT +CL D+WIGCDK Sbjct: 578 AEGNYNLTCYCLCDSWIGCDK 598
|