BP912582
Clone id YMU001_000020_E12
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGGGCTTTGGGGAAGTGGTAGTAGATGCTGAGTTGCTCTTCTCATTTTCATGTTATGCT
TTGAACAAGCCTCCAGAAGGTGTAGTGACCTGTGGTAAAGTTGGCATATAAAGTTGCTCA
CTCTCGTGATGGTGTCGATGAGGTATCCATGTTTCTTAAGCTCTGATTGGCCAACAACCT
AATTGCACTTGGCAATTTATATAATCCAAAGGAATCGCGGTTGTGTGATGCTATTCCTGA
GTGGACAGTCGTGTCTCGCACATGTCCTTGGTTCAAGTGCATATGATAAGTGCCTCACAT
TGTAGCTACATAGTTTCTATATATGTAGGAAATAAGGTTCCAAAGGTCCCACAGCACAGG
TTTTTCTGAGATGATGGGTGGCAATACTATATATACAGTTGCATAGCTCATATATAAACA
CTGCACATGCATTGATTTGTTATAAAAGACTCCAGATTCGAACATTGAAAACTTCAACCA
AGCCCACGTGCTTGCAAGATCT
■■Homology search results ■■ -
sp_hit_id Q92570
Definition sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens
Align length 44
Score (bit) 32.0
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912582|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_E12.
(502 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A membe... 32 1.6
sp|A6NMS7|L37A1_HUMAN Leucine-rich repeat-containing protein 37A... 32 1.6
sp|O60309|L37A3_HUMAN Leucine-rich repeat-containing protein 37A... 31 2.8
sp|A6NM11|L37A2_HUMAN Leucine-rich repeat-containing protein 37A... 31 3.7
sp|Q1EHB4|SC5AC_HUMAN Sodium-coupled monocarboxylate transporter... 30 6.4

>sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3
OS=Homo sapiens GN=NR4A3 PE=2 SV=3
Length = 626

Score = 32.0 bits (71), Expect = 1.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3

Query: 140 HRHHHESEQLYMPTLPQVTTPSGGLFKA*HENEKSNSASTTTSP 9
H HHH +Q P++P ++P + + K + ST T+P
Sbjct: 103 HHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPTTP 146


>sp|A6NMS7|L37A1_HUMAN Leucine-rich repeat-containing protein 37A
OS=Homo sapiens GN=LRRC37A PE=2 SV=2
Length = 1700

Score = 32.0 bits (71), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3

Query: 218 AIPLDYINCQVQLGCWPIRA*ETWIPHRHHHESEQLYMPTLP 93
A PL+++ +QL P+ E+W H H E + PTLP
Sbjct: 37 AQPLEWVKDPLQLTSNPLGPPESWSSHSSHFPRESPHAPTLP 78


>sp|O60309|L37A3_HUMAN Leucine-rich repeat-containing protein 37A3
OS=Homo sapiens GN=LRRC37A3 PE=2 SV=2
Length = 1634

Score = 31.2 bits (69), Expect = 2.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3

Query: 218 AIPLDYINCQVQLGCWPIRA*ETWIPHRHHHESEQLYMPTLP 93
A PL+++ +QL P+ E W H H E + PTLP
Sbjct: 37 AQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLP 78


>sp|A6NM11|L37A2_HUMAN Leucine-rich repeat-containing protein 37A2
OS=Homo sapiens GN=LRRC37A2 PE=2 SV=2
Length = 1700

Score = 30.8 bits (68), Expect = 3.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3

Query: 218 AIPLDYINCQVQLGCWPIRA*ETWIPHRHHHESEQLYMPTLP 93
A PL+++ +QL P+ ++W H H E + PTLP
Sbjct: 37 AQPLEWVKDPLQLTSNPLGPPDSWSSHSSHFPRESPHAPTLP 78


>sp|Q1EHB4|SC5AC_HUMAN Sodium-coupled monocarboxylate transporter 2
OS=Homo sapiens GN=SLC5A12 PE=2 SV=2
Length = 618

Score = 30.0 bits (66), Expect = 6.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2

Query: 381 PPIISEKPVLWDLWNLISYIYRNYVATM 298
PP++S +P + D W ISY+Y + V +
Sbjct: 486 PPVLSSRPGIADTWYSISYLYYSAVGCL 513


tr_hit_id Q5B9N1
Definition tr|Q5B9N1|Q5B9N1_EMENI Putative uncharacterized protein OS=Emericella nidulans
Align length 61
Score (bit) 33.5
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912582|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_E12.
(502 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5B9N1|Q5B9N1_EMENI Putative uncharacterized protein OS=Emeri... 33 5.7
tr|B5IEM2|B5IEM2_9EURY Nickel-dependent hydrogenase superfamily ... 33 9.9
tr|B5IEA3|B5IEA3_9EURY Nickel-dependent hydrogenase superfamily ... 33 9.9

>tr|Q5B9N1|Q5B9N1_EMENI Putative uncharacterized protein OS=Emericella
nidulans GN=AN2749.2 PE=4 SV=1
Length = 1174

Score = 33.5 bits (75), Expect = 5.7
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 14/61 (22%)
Frame = -3

Query: 143 PHRHHHESEQLYMPTLPQVTTPSGGLFKA--------------*HENEKSNSASTTTSPK 6
P R H L+ PT P+ TP GGL H S S +T T+P+
Sbjct: 918 PSRDEHRRSVLWQPTAPRPVTPGGGLTPEQFVQQRAAPSPPIHVHRRSPSTSTTTITAPR 977

Query: 5 P 3
P
Sbjct: 978 P 978


>tr|B5IEM2|B5IEM2_9EURY Nickel-dependent hydrogenase superfamily
OS=Aciduliprofundum boonei T469 GN=ABOONEI_312 PE=4 SV=1
Length = 376

Score = 32.7 bits (73), Expect = 9.9
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2

Query: 369 SEKPVLWDLWNLISYIYRNYVATM*GTYHMHLNQGHVRDTTVHSGIASHNRDSFGLYKLP 190
SE LWD ++ +Y+ +AT+ + H Q H+R+ V A H+ Y +
Sbjct: 209 SEYVALWDGHSIP--LYKGEIATLSSIFDPHQYQEHIREWVVEYSSAKHSLIDGRDYMVG 266

Query: 189 SAIRLLANQSLR 154
+ RL N++LR
Sbjct: 267 ALARLNINRNLR 278


>tr|B5IEA3|B5IEA3_9EURY Nickel-dependent hydrogenase superfamily
OS=Aciduliprofundum boonei T469 GN=ABOONEI_2746 PE=4
SV=1
Length = 421

Score = 32.7 bits (73), Expect = 9.9
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2

Query: 369 SEKPVLWDLWNLISYIYRNYVATM*GTYHMHLNQGHVRDTTVHSGIASHNRDSFGLYKLP 190
SE LWD ++ +Y+ +AT+ + H Q H+R+ V A H+ Y +
Sbjct: 209 SEYVALWDGHSIP--LYKGEIATLSSIFDPHQYQEHIREWVVEYSSAKHSLIEGRDYMVG 266

Query: 189 SAIRLLANQSLR 154
+ RL N++LR
Sbjct: 267 ALARLNINRNLR 278