BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912503|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_B04.
         (455 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=2     32   0.99 
sp|A5PK40|CTL3_BOVIN Choline transporter-like protein 3 OS=Bos t...    30   6.4  

>sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=2
          Length = 2443

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 249  VECFKVQPHNQPFLTSEELTSRTCYPWHNHQFLPARFLSDLTPPAAV 109
            ++C+K+ P N PFL  +EL     +PW        +  S+LT P  +
Sbjct: 1009 LDCYKLSPENCPFLEKKEL--HEAHPWFEFLVQCRQVASNLTDPKLI 1053


>sp|A5PK40|CTL3_BOVIN Choline transporter-like protein 3 OS=Bos
           taurus GN=SLC44A3 PE=2 SV=1
          Length = 649

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 250 DCLLSRCMRSVCCKCGWC*EFQCFR 324
           D  LSRC+   CC C WC + +C R
Sbjct: 466 DGALSRCVSQCCCCCFWCLD-KCLR 489

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912503|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_B04.
         (455 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q13LH5|Q13LH5_BURXL Putative membrane protein OS=Burkholderia...    33   7.1  

>tr|Q13LH5|Q13LH5_BURXL Putative membrane protein OS=Burkholderia
           xenovorans (strain LB400) GN=Bxeno_B2096 PE=4 SV=1
          Length = 1026

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 24/65 (36%), Positives = 29/65 (44%)
 Frame = -3

Query: 213 FLTSEELTSRTCYPWHNHQFLPARFLSDLTPPAAVSVQWSEAHPITVLEATDGPLLSVLS 34
           FL +  L +R C        L AR+LS+LT     SV    +H I   EA  GP  S L 
Sbjct: 30  FLFALALAARFCQVEIETSRLQARYLSELTRDVGFSVAEGPSHSIRFPEADKGPYDSRLG 89

Query: 33  SRQLP 19
              LP
Sbjct: 90  YALLP 94